| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581542
Identifier: 118581542
GI number: 118581542
Start: 3445514
End: 3446896
Strand: Direct
Name: 118581542
Synonym: Ppro_3141
Alternate gene names: NA
Gene position: 3445514-3446896 (Clockwise)
Preceding gene: 118581541
Following gene: 118581543
Centisome position: 85.97
GC content: 50.98
Gene sequence:
>1383_bases ATGGCGGGAAAGATCAAAGAAATGATTGATTTTGTTCTCAAGCAGAGGGCTGGTGGCAACCCAATGTTGGAGAAGATCAT CAAGACCAAAATGATTCTGAAAGGCATCAATCCAGGCAAATTCACACCAGAGTCAGAGGACAATCCGGAGATAGTGCAGC AACTGGAAGGAATGTCGATGGAACTGGGCTACCTTTGCCCCGAAGCCAGCTCCAACGCCGCCTCGGGTTCCGAAGAAAGC GATTCGTCAACCGACAACAAACTGGTCAACAGGCTGGACATCGTAACGGCATATTCGTCACAGGACGATATCGACGACGT ATGCAGCGAGTTATCAAAGCAATTTGTTCTCTTCGACACAAAGCTCGTGGTCTTTTTCGCATCTTCAAAATACGCGCCCG AAGAGATCAGCAAAAAAATGCAGGAGACATTCCCACACGCCTTGGTCTTCGGATGTTCCACCGCGGGGGAAATTGTAACC GGTTCGATGCTGAATGAATCCGTTGTGGCCATGGGATTCAACAACGAATCACTGCTGGATGCAAAAATCGAAGTCATTGA AGACATCAAAGACCCGGAGGGGGTCAAAAAGGCTTTTGACTCCTTTACCGACCATTTCGGAGTTGCCATCGCCGACATGC CGTCAAAAGAATACGTCGGGATCATACTGGTTGACGGGTTGAGCAGTGCCGAAGAAGGTATGATGGAGACCATCGGCGAT TCGACGAATGTCGTTTTCATCGGCGGTTCCGCCGGAGACGATATGAAGTTCAAATCCACCTACCTGTATGCGAACGGAAA AGCCTACACGAACGCGGCTCTGCTGGCATTGCTCAAACCGGGAGCGGATTTCACCTTCATCAAGACCCAGAGCTGCCGTG ATCTCGGAAAACCTCTTGTTGTGACAAAGGCCGATGAGGCACGACGCGTGGTCCTTGAATTTAACGGCAAGCCAGCGGCA ACAGCGTATGCCGAGGCGGTTAACTGCGCGGTTGAAGACGTGACCAAACACTTCACGGACAACCCGGTAGGGCTGGTGAT AGACGGCGACCCCTTTGTCCGGACTCCCCAGCAGATCAAGGATGATGGCGCCATGGCATTTTATTGCAGCGTCAAGGAAG GAATGGAGCTGTCCCTCCTGGAGGCGACCGACATCATTGAAGACACTCGCAACGCACTCCTCCAGGCACAAAAGGAATCC GGAAGAATAATCGGGGTCATGAACTTCAATTGCATCATGAGGAAGCTGGAGCTTGAACAGGGCAATGTGACCCAGCAATA CGGTGACCTTTTTTCTTCGGTACCAACGGTCGGATTCAGCACCTATGGAGAACAGTACATCGGCCATCTGAATCAAACCG CAACAATGCTGGTATTCAAGTAA
Upstream 100 bases:
>100_bases TACTGTCAACCCTGAACAAAATACTGCATGCCCTGACCGCATCGGTGACGTACTGATGCCGCTGCCAGGTCATGTCATCC GGTGAGCACAAGGAGGATCC
Downstream 100 bases:
>100_bases CTCGATAGAATTCGTGCATTGCAAATGTACGTACATCTTCGTGCGAATTAAGTGACCGTTTAGCACGACAAAAACCATGG AGGTTCACCATGCCTGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MAGKIKEMIDFVLKQRAGGNPMLEKIIKTKMILKGINPGKFTPESEDNPEIVQQLEGMSMELGYLCPEASSNAASGSEES DSSTDNKLVNRLDIVTAYSSQDDIDDVCSELSKQFVLFDTKLVVFFASSKYAPEEISKKMQETFPHALVFGCSTAGEIVT GSMLNESVVAMGFNNESLLDAKIEVIEDIKDPEGVKKAFDSFTDHFGVAIADMPSKEYVGIILVDGLSSAEEGMMETIGD STNVVFIGGSAGDDMKFKSTYLYANGKAYTNAALLALLKPGADFTFIKTQSCRDLGKPLVVTKADEARRVVLEFNGKPAA TAYAEAVNCAVEDVTKHFTDNPVGLVIDGDPFVRTPQQIKDDGAMAFYCSVKEGMELSLLEATDIIEDTRNALLQAQKES GRIIGVMNFNCIMRKLELEQGNVTQQYGDLFSSVPTVGFSTYGEQYIGHLNQTATMLVFK
Sequences:
>Translated_460_residues MAGKIKEMIDFVLKQRAGGNPMLEKIIKTKMILKGINPGKFTPESEDNPEIVQQLEGMSMELGYLCPEASSNAASGSEES DSSTDNKLVNRLDIVTAYSSQDDIDDVCSELSKQFVLFDTKLVVFFASSKYAPEEISKKMQETFPHALVFGCSTAGEIVT GSMLNESVVAMGFNNESLLDAKIEVIEDIKDPEGVKKAFDSFTDHFGVAIADMPSKEYVGIILVDGLSSAEEGMMETIGD STNVVFIGGSAGDDMKFKSTYLYANGKAYTNAALLALLKPGADFTFIKTQSCRDLGKPLVVTKADEARRVVLEFNGKPAA TAYAEAVNCAVEDVTKHFTDNPVGLVIDGDPFVRTPQQIKDDGAMAFYCSVKEGMELSLLEATDIIEDTRNALLQAQKES GRIIGVMNFNCIMRKLELEQGNVTQQYGDLFSSVPTVGFSTYGEQYIGHLNQTATMLVFK >Mature_459_residues AGKIKEMIDFVLKQRAGGNPMLEKIIKTKMILKGINPGKFTPESEDNPEIVQQLEGMSMELGYLCPEASSNAASGSEESD SSTDNKLVNRLDIVTAYSSQDDIDDVCSELSKQFVLFDTKLVVFFASSKYAPEEISKKMQETFPHALVFGCSTAGEIVTG SMLNESVVAMGFNNESLLDAKIEVIEDIKDPEGVKKAFDSFTDHFGVAIADMPSKEYVGIILVDGLSSAEEGMMETIGDS TNVVFIGGSAGDDMKFKSTYLYANGKAYTNAALLALLKPGADFTFIKTQSCRDLGKPLVVTKADEARRVVLEFNGKPAAT AYAEAVNCAVEDVTKHFTDNPVGLVIDGDPFVRTPQQIKDDGAMAFYCSVKEGMELSLLEATDIIEDTRNALLQAQKESG RIIGVMNFNCIMRKLELEQGNVTQQYGDLFSSVPTVGFSTYGEQYIGHLNQTATMLVFK
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50079; Mature: 49948
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKIKEMIDFVLKQRAGGNPMLEKIIKTKMILKGINPGKFTPESEDNPEIVQQLEGMSM CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCE ELGYLCPEASSNAASGSEESDSSTDNKLVNRLDIVTAYSSQDDIDDVCSELSKQFVLFDT EECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCEEEEEE KLVVFFASSKYAPEEISKKMQETFPHALVFGCSTAGEIVTGSMLNESVVAMGFNNESLLD EEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHCCHHCCCCEEEEECCCCCHHH AKIEVIEDIKDPEGVKKAFDSFTDHFGVAIADMPSKEYVGIILVDGLSSAEEGMMETIGD HHHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCC STNVVFIGGSAGDDMKFKSTYLYANGKAYTNAALLALLKPGADFTFIKTQSCRDLGKPLV CCCEEEEECCCCCCCEEEEEEEEECCCHHHHHHEEEEECCCCCEEEEECCCHHHHCCCEE VTKADEARRVVLEFNGKPAATAYAEAVNCAVEDVTKHFTDNPVGLVIDGDPFVRTPQQIK EEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHC DDGAMAFYCSVKEGMELSLLEATDIIEDTRNALLQAQKESGRIIGVMNFNCIMRKLELEQ CCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCC GNVTQQYGDLFSSVPTVGFSTYGEQYIGHLNQTATMLVFK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure AGKIKEMIDFVLKQRAGGNPMLEKIIKTKMILKGINPGKFTPESEDNPEIVQQLEGMSM CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCE ELGYLCPEASSNAASGSEESDSSTDNKLVNRLDIVTAYSSQDDIDDVCSELSKQFVLFDT EECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCEEEEEE KLVVFFASSKYAPEEISKKMQETFPHALVFGCSTAGEIVTGSMLNESVVAMGFNNESLLD EEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHCCHHCCCCEEEEECCCCCHHH AKIEVIEDIKDPEGVKKAFDSFTDHFGVAIADMPSKEYVGIILVDGLSSAEEGMMETIGD HHHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCC STNVVFIGGSAGDDMKFKSTYLYANGKAYTNAALLALLKPGADFTFIKTQSCRDLGKPLV CCCEEEEECCCCCCCEEEEEEEEECCCHHHHHHEEEEECCCCCEEEEECCCHHHHCCCEE VTKADEARRVVLEFNGKPAATAYAEAVNCAVEDVTKHFTDNPVGLVIDGDPFVRTPQQIK EEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHC DDGAMAFYCSVKEGMELSLLEATDIIEDTRNALLQAQKESGRIIGVMNFNCIMRKLELEQ CCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCC GNVTQQYGDLFSSVPTVGFSTYGEQYIGHLNQTATMLVFK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA