| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is yebE [C]
Identifier: 118581515
GI number: 118581515
Start: 3417094
End: 3417717
Strand: Reverse
Name: yebE [C]
Synonym: Ppro_3114
Alternate gene names: 118581515
Gene position: 3417717-3417094 (Counterclockwise)
Preceding gene: 118581516
Following gene: 118581514
Centisome position: 85.27
GC content: 69.39
Gene sequence:
>624_bases ATGATCGATGGGGCGAAGCTGCTGGGGGGGCTGCTGAATGGTTCCCTGAACTCAACCCTGGGCGGCATGACCAAGGGCAG GCTGCCCGGAAAGGCCGCCCTGGGCATGGGCATCCTGGGGGTGGCCATTGCCGCTTTCGAACACTTCAGCAGCCAGAACA GGGATGCCTCGCCCCCCGCCACGGGGAGGAGCGGTTCCGGTTCTTCGCCACCCCCTCCGCCCCCCTTTGGCGGGAGTTCG CCGTCCCCGCCTCCCGGGAGCGTACCCCCGCCCTTGGTCGGAACCGATCCGGTCCTGCTGCTGCGGGCCATGATCAGTGC CGCCCATGCCGACGGCTCGCTGGACGACGCCGAGCGGCGGCGCATCACCGCTCACCTGGAGCGGGCACGGCTGAGCGGGG AGGAACGTTCCTTTCTGGCCAGCGAGCTGGAGACGCCCCGTCCCCTGGCCGATATCGTTGCCGCGGTCACAACCCCTGCC GATGCCGAACAGGTGTTCGCCGTCTCTCTGCTGGCGGTGGAGGTGGACAGCCAGGCGGAGCGGGCCTACCTGGAGCAGTT GCGCCAGGCCCTGGGGATCGAGCCCCTGAAGGCGGTGGAAATCGCCCGCAGCATCGGGTGCTGA
Upstream 100 bases:
>100_bases TGAAATGGCGCCGATTGCGGCTACAATGGGGAGGCGTCACGGTAACGAAATCCGGGCGGTCTGTTTGAGAAACGTCATTT CATATCAGGAGGATGATCAG
Downstream 100 bases:
>100_bases ACTGCTCCGTCAGCGGTCTGGCTGTTTCCGCTGCCCCTCTCCGGGGGGGCGGCGGATGGACATAAGGAAAAAATGAAGGA GACACGACAATGACCCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIDGAKLLGGLLNGSLNSTLGGMTKGRLPGKAALGMGILGVAIAAFEHFSSQNRDASPPATGRSGSGSSPPPPPPFGGSS PSPPPGSVPPPLVGTDPVLLLRAMISAAHADGSLDDAERRRITAHLERARLSGEERSFLASELETPRPLADIVAAVTTPA DAEQVFAVSLLAVEVDSQAERAYLEQLRQALGIEPLKAVEIARSIGC
Sequences:
>Translated_207_residues MIDGAKLLGGLLNGSLNSTLGGMTKGRLPGKAALGMGILGVAIAAFEHFSSQNRDASPPATGRSGSGSSPPPPPPFGGSS PSPPPGSVPPPLVGTDPVLLLRAMISAAHADGSLDDAERRRITAHLERARLSGEERSFLASELETPRPLADIVAAVTTPA DAEQVFAVSLLAVEVDSQAERAYLEQLRQALGIEPLKAVEIARSIGC >Mature_207_residues MIDGAKLLGGLLNGSLNSTLGGMTKGRLPGKAALGMGILGVAIAAFEHFSSQNRDASPPATGRSGSGSSPPPPPPFGGSS PSPPPGSVPPPLVGTDPVLLLRAMISAAHADGSLDDAERRRITAHLERARLSGEERSFLASELETPRPLADIVAAVTTPA DAEQVFAVSLLAVEVDSQAERAYLEQLRQALGIEPLKAVEIARSIGC
Specific function: Unknown
COG id: COG2979
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21213; Mature: 21213
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGAKLLGGLLNGSLNSTLGGMTKGRLPGKAALGMGILGVAIAAFEHFSSQNRDASPPA CCCHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TGRSGSGSSPPPPPPFGGSSPSPPPGSVPPPLVGTDPVLLLRAMISAAHADGSLDDAERR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH RITAHLERARLSGEERSFLASELETPRPLADIVAAVTTPADAEQVFAVSLLAVEVDSQAE HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHH RAYLEQLRQALGIEPLKAVEIARSIGC HHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MIDGAKLLGGLLNGSLNSTLGGMTKGRLPGKAALGMGILGVAIAAFEHFSSQNRDASPPA CCCHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TGRSGSGSSPPPPPPFGGSSPSPPPGSVPPPLVGTDPVLLLRAMISAAHADGSLDDAERR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH RITAHLERARLSGEERSFLASELETPRPLADIVAAVTTPADAEQVFAVSLLAVEVDSQAE HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHH RAYLEQLRQALGIEPLKAVEIARSIGC HHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA