| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581513
Identifier: 118581513
GI number: 118581513
Start: 3415026
End: 3415898
Strand: Reverse
Name: 118581513
Synonym: Ppro_3112
Alternate gene names: NA
Gene position: 3415898-3415026 (Counterclockwise)
Preceding gene: 118581514
Following gene: 118581512
Centisome position: 85.23
GC content: 64.26
Gene sequence:
>873_bases TTGTGCCGAGCCTCCAAGGAGTTGACCATGTTCAGGAAAATGCTTGTCTGTACCGATCTCTCCCCTGCATCGGACGCGCT GATCAAGTGCGTGGAGGAGTTGCGCAACGTCGGCATGGAAGAGGTCGTCCTCACCCACGTCAGGTTTATGTCCACTGCGC CCGGCGTCGAAGAGATCCTTTCCGAAGAGAGTTCACCCGCCCTGCAGGGGCAGCGCTCCTACCTGGAGGAACGGGGGATG CGGGTCTCCGTGGAGATGCCCTGCGGCCTCCCCTCCCAGGGCATCGTGGATGTGGCGGAGAAGCACGACGTCTCGGCCAT CCTGATCGGTTCCCACGGCAAGGGCATCCTTCAGTCTGCGGCCCTGGGCAGTGTCTCCGCGCAGTTGCTCCACCAGATGC GCCGCCCCGTTCTCTTGGCCCGTATCGCCCTTTTGGAAGGGGGGGAGTGCGAATCGGTCTGCTCCAGGATGTTCCGCCGC CTGCTCTTCCCCACCGATTTTTCCGAGACCGCCGAGCGGGCGATGGAGTACCTGGGCAGGATAATCAAGGGTACCCGCTG TTCCGTGACCGTCATGCATGTGCGGGAGCAGGGGGGGGCTGATCAGCAGGACTCCGAGGAGGATGTGCGCTTCCTGCTGG AGGCCAAGGCGAGGCGTCTGCGAATGCAGGGGGCAACGGAGGTGATCCCCCTGCTGGTTCATGGTTCGCCGGCCGGGGAG ATTGTCGAGCGCGCCGCACGCGGCGGCTTCTCCCTGATCGTCATGGGCGGACAGGGCAAGGGGATCATTGAGGAGCTCTT CCTTGGGAGCGTTGCCAACCAGGTGGCGCGCCGCGCGGAGACCCCGGTGTTGTTCATTCCGGCGCTCCGGTGA
Upstream 100 bases:
>100_bases GTTGCGAGGCTGAACGACGGATGGCGTACGGCCCGTTTTGGCGTTAGGTCCGCGCCGGCGGGCCATCCCGATTGAACCAG ACCAGGGGGCTGGAAAGGGT
Downstream 100 bases:
>100_bases TGCCAACGGGTTGACATCCCGCCTGTTTTCGTCGTTGCCTCTTCGAGGCGAACCGAAGGCAACTGCGACAGCCGGATTCA GGGGGATGGGCCTGGTGGCC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP MJ0577 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MCRASKELTMFRKMLVCTDLSPASDALIKCVEELRNVGMEEVVLTHVRFMSTAPGVEEILSEESSPALQGQRSYLEERGM RVSVEMPCGLPSQGIVDVAEKHDVSAILIGSHGKGILQSAALGSVSAQLLHQMRRPVLLARIALLEGGECESVCSRMFRR LLFPTDFSETAERAMEYLGRIIKGTRCSVTVMHVREQGGADQQDSEEDVRFLLEAKARRLRMQGATEVIPLLVHGSPAGE IVERAARGGFSLIVMGGQGKGIIEELFLGSVANQVARRAETPVLFIPALR
Sequences:
>Translated_290_residues MCRASKELTMFRKMLVCTDLSPASDALIKCVEELRNVGMEEVVLTHVRFMSTAPGVEEILSEESSPALQGQRSYLEERGM RVSVEMPCGLPSQGIVDVAEKHDVSAILIGSHGKGILQSAALGSVSAQLLHQMRRPVLLARIALLEGGECESVCSRMFRR LLFPTDFSETAERAMEYLGRIIKGTRCSVTVMHVREQGGADQQDSEEDVRFLLEAKARRLRMQGATEVIPLLVHGSPAGE IVERAARGGFSLIVMGGQGKGIIEELFLGSVANQVARRAETPVLFIPALR >Mature_290_residues MCRASKELTMFRKMLVCTDLSPASDALIKCVEELRNVGMEEVVLTHVRFMSTAPGVEEILSEESSPALQGQRSYLEERGM RVSVEMPCGLPSQGIVDVAEKHDVSAILIGSHGKGILQSAALGSVSAQLLHQMRRPVLLARIALLEGGECESVCSRMFRR LLFPTDFSETAERAMEYLGRIIKGTRCSVTVMHVREQGGADQQDSEEDVRFLLEAKARRLRMQGATEVIPLLVHGSPAGE IVERAARGGFSLIVMGGQGKGIIEELFLGSVANQVARRAETPVLFIPALR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 31675; Mature: 31675
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRASKELTMFRKMLVCTDLSPASDALIKCVEELRNVGMEEVVLTHVRFMSTAPGVEEIL CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH SEESSPALQGQRSYLEERGMRVSVEMPCGLPSQGIVDVAEKHDVSAILIGSHGKGILQSA CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHH ALGSVSAQLLHQMRRPVLLARIALLEGGECESVCSRMFRRLLFPTDFSETAERAMEYLGR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIKGTRCSVTVMHVREQGGADQQDSEEDVRFLLEAKARRLRMQGATEVIPLLVHGSPAGE HHCCCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCHHH IVERAARGGFSLIVMGGQGKGIIEELFLGSVANQVARRAETPVLFIPALR HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MCRASKELTMFRKMLVCTDLSPASDALIKCVEELRNVGMEEVVLTHVRFMSTAPGVEEIL CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH SEESSPALQGQRSYLEERGMRVSVEMPCGLPSQGIVDVAEKHDVSAILIGSHGKGILQSA CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHH ALGSVSAQLLHQMRRPVLLARIALLEGGECESVCSRMFRRLLFPTDFSETAERAMEYLGR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIKGTRCSVTVMHVREQGGADQQDSEEDVRFLLEAKARRLRMQGATEVIPLLVHGSPAGE HHCCCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCHHH IVERAARGGFSLIVMGGQGKGIIEELFLGSVANQVARRAETPVLFIPALR HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 9860944 [H]