| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581512
Identifier: 118581512
GI number: 118581512
Start: 3414093
End: 3414734
Strand: Reverse
Name: 118581512
Synonym: Ppro_3111
Alternate gene names: NA
Gene position: 3414734-3414093 (Counterclockwise)
Preceding gene: 118581513
Following gene: 118581511
Centisome position: 85.2
GC content: 52.8
Gene sequence:
>642_bases ATGGCTCGATTTCGTTTTCAGCAACTCGTAGATACCCACAAGATCCAGACCCTCATGGAGTCGTACAACAGGGTGACCGG ACTGCTTTCTGCCATTCTGGATACCGATGAGCGGGTGCTGGTTGCCGCCGGTTGGCAGGACATATGTGTACGTTTTCATC GCCAACACCCGGTAACCCTTGCCCGCTGCAAGGAAAGCGAAGCCTTTATCAAGTCTCAGTTGCTGCGTTACGAAGGGAGA TTTTTCGAGTATCGCTGCAGGAACGGCTTGCGGGACATGGCCATGCCGATCGTGTTTGACGGTGAACACCTGGCGACGTT TTTCTTCGGTCAGTGTTTTTACGAAGATGACAATCCCGATCCCGAGTTCTTTCGACAGCAGGCTCGGGAATTCGGTTTTG ATGAAGAGAAATACATTGCAGCGCTGGAGTCGGTTCCGGTCTATTCCCGGGAGCAGATGCGCAATGCCCTGGAACTCTAT TCGAACCTGATGAATATTATTTCCGAAATGGGAACCAAGAAACTCGTGCTTGTACAGGAGATCGAGGCGCGGGAGAGGGT CAGTCGGGTCATGCTGGAGTCCAGGACCTATACCGACCGGGTTCTTTCCGCGATTCTGTCCGAGGGATACGACGAAGTCT GA
Upstream 100 bases:
>100_bases CTGTTGGCTGTTTCTGGGTGATTGTCGCTATTGTCTTTTTGCGCACGGATCTTGCTGTGCGAGAGGCTGTATTTCACTCA GTTCAGCGTGGGGGGCAGCC
Downstream 100 bases:
>100_bases GCTTCGCTCCTGGAACCTTTTCCCCTTCTGTTCTCTCTCTTTCATTCAAAGCGCGATTCGCCCTAATCACCTTCCCACAT AATTTGCTTCCACATTGAAC
Product: signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein
Products: NA
Alternate protein names: PAS/PAC Sensor Hybrid Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Methyl-Accepting Chemotaxis Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Histidine Kinase; Two Component Sensor Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Diguanylate Cyclase With PAS/PAC Sensor; Sensory Transduction Protein Kinase; Sensory Domain-Containing/LuxR Family Regulatory Protein; Sensory Box Histidine Kinase/Response Regulator; PAS/PAC And GAF Sensor-Containg Diguanylate Cyclase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Signal Transduction Protein; Sensor Domain-Like Protein; PAS/PAC Sensor Protein; Two-Component System Sensor Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MARFRFQQLVDTHKIQTLMESYNRVTGLLSAILDTDERVLVAAGWQDICVRFHRQHPVTLARCKESEAFIKSQLLRYEGR FFEYRCRNGLRDMAMPIVFDGEHLATFFFGQCFYEDDNPDPEFFRQQAREFGFDEEKYIAALESVPVYSREQMRNALELY SNLMNIISEMGTKKLVLVQEIEARERVSRVMLESRTYTDRVLSAILSEGYDEV
Sequences:
>Translated_213_residues MARFRFQQLVDTHKIQTLMESYNRVTGLLSAILDTDERVLVAAGWQDICVRFHRQHPVTLARCKESEAFIKSQLLRYEGR FFEYRCRNGLRDMAMPIVFDGEHLATFFFGQCFYEDDNPDPEFFRQQAREFGFDEEKYIAALESVPVYSREQMRNALELY SNLMNIISEMGTKKLVLVQEIEARERVSRVMLESRTYTDRVLSAILSEGYDEV >Mature_212_residues ARFRFQQLVDTHKIQTLMESYNRVTGLLSAILDTDERVLVAAGWQDICVRFHRQHPVTLARCKESEAFIKSQLLRYEGRF FEYRCRNGLRDMAMPIVFDGEHLATFFFGQCFYEDDNPDPEFFRQQAREFGFDEEKYIAALESVPVYSREQMRNALELYS NLMNIISEMGTKKLVLVQEIEARERVSRVMLESRTYTDRVLSAILSEGYDEV
Specific function: Unknown
COG id: COG2202
COG function: function code T; FOG: PAS/PAC domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25087; Mature: 24956
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFRFQQLVDTHKIQTLMESYNRVTGLLSAILDTDERVLVAAGWQDICVRFHRQHPVTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHH ARCKESEAFIKSQLLRYEGRFFEYRCRNGLRDMAMPIVFDGEHLATFFFGQCFYEDDNPD HHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCEEECCHHHHHHHHHHHHCCCCCCC PEFFRQQAREFGFDEEKYIAALESVPVYSREQMRNALELYSNLMNIISEMGTKKLVLVQE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEARERVSRVMLESRTYTDRVLSAILSEGYDEV HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARFRFQQLVDTHKIQTLMESYNRVTGLLSAILDTDERVLVAAGWQDICVRFHRQHPVTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHH ARCKESEAFIKSQLLRYEGRFFEYRCRNGLRDMAMPIVFDGEHLATFFFGQCFYEDDNPD HHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCEEECCHHHHHHHHHHHHCCCCCCC PEFFRQQAREFGFDEEKYIAALESVPVYSREQMRNALELYSNLMNIISEMGTKKLVLVQE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEARERVSRVMLESRTYTDRVLSAILSEGYDEV HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA