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The map label for this gene is yrvM [H]

Identifier: 118581441

GI number: 118581441

Start: 3317138

End: 3317914

Strand: Direct

Name: yrvM [H]

Synonym: Ppro_3036

Alternate gene names: 118581441

Gene position: 3317138-3317914 (Clockwise)

Preceding gene: 118581440

Following gene: 118581443

Centisome position: 82.76

GC content: 63.84

Gene sequence:

>777_bases
ATGTCAGCTCTGCACCGATTTTCCCGCACCGAACTGCTCATCGGAAGCAACGGCCTGGCAACGCTCAAGAGCAGCCACGT
CCTGATCTGCGGCATCGGCGGCGTGGGCAGCTACGCGGCCGAGGCCCTGGGAAGGGCCGGTGTCGGGCGCATCACCCTGG
TGGATTGCGACGACATCTGCCTGACCAACGTCAACCGCCAGATCCACGCCCTCTCCAGCACCGTGGGCCGTCCCAAGGTC
GAGGTCATGGCGGAGCGGCTGCGTGACATCAACCCGGATGCGGAGATCGTCCCGGTCAAGGCCTTCTTCTCCCAGGAGAA
TGCGCAGGAACTGCTGGATCCGGCACCGGACTACGTGCTGGATGCCATCGACCACTTCACCGCCAAGACAACCCTGATCA
CCCTCTGCCGAAGCCGCAACATCCCGATCATCTCCAGCATGGGGGCGGCCAACAAGCTGGACCCGACCAAGATCCACTTG
GACGACATCTCTGCCACCCGCCACTGCCGCATGGCCCGTAGCATGCGCAAGATTCTGCGCCAGGCAGGTATCGAGAGCGG
GGTGCGGGTGGTCTACTCCACCGAGGAGCACCGCCAGCTGGACCCAGCCAGCACCAGCCACTGCGACAACGCCCCCGTCT
GCCCCCAGCGCGACGACCGGAGTTTCCGTTGTGAAAACCGAAAGGTGATTCTGGGGAGTATTTCCTTCATCCCCTCCATC
TTCGGCCTGACCATGGCCGGGGCTGTGGTAGGCGAACTGCTGTCGGGCAGCTGGTAA

Upstream 100 bases:

>100_bases
ATCATCATGATCCTGACCTTCATCCACTACTTCCGCCAGCAGCAAATCTCCGCCACTTCCCAGAACAGCTGAGTACGTTG
AGCGCCGAGGAATAGCCATC

Downstream 100 bases:

>100_bases
CATCAATTCTCAACAAAAAAACCGTTCCGGCACGAAGGCACGGGAAAACCAGGGGTGGAAGATCATCGGAGTCCCTGCCA
CGATTTCTTCCGTTCTTGTT

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSALHRFSRTELLIGSNGLATLKSSHVLICGIGGVGSYAAEALGRAGVGRITLVDCDDICLTNVNRQIHALSSTVGRPKV
EVMAERLRDINPDAEIVPVKAFFSQENAQELLDPAPDYVLDAIDHFTAKTTLITLCRSRNIPIISSMGAANKLDPTKIHL
DDISATRHCRMARSMRKILRQAGIESGVRVVYSTEEHRQLDPASTSHCDNAPVCPQRDDRSFRCENRKVILGSISFIPSI
FGLTMAGAVVGELLSGSW

Sequences:

>Translated_258_residues
MSALHRFSRTELLIGSNGLATLKSSHVLICGIGGVGSYAAEALGRAGVGRITLVDCDDICLTNVNRQIHALSSTVGRPKV
EVMAERLRDINPDAEIVPVKAFFSQENAQELLDPAPDYVLDAIDHFTAKTTLITLCRSRNIPIISSMGAANKLDPTKIHL
DDISATRHCRMARSMRKILRQAGIESGVRVVYSTEEHRQLDPASTSHCDNAPVCPQRDDRSFRCENRKVILGSISFIPSI
FGLTMAGAVVGELLSGSW
>Mature_257_residues
SALHRFSRTELLIGSNGLATLKSSHVLICGIGGVGSYAAEALGRAGVGRITLVDCDDICLTNVNRQIHALSSTVGRPKVE
VMAERLRDINPDAEIVPVKAFFSQENAQELLDPAPDYVLDAIDHFTAKTTLITLCRSRNIPIISSMGAANKLDPTKIHLD
DISATRHCRMARSMRKILRQAGIESGVRVVYSTEEHRQLDPASTSHCDNAPVCPQRDDRSFRCENRKVILGSISFIPSIF
GLTMAGAVVGELLSGSW

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=198, Percent_Identity=41.9191919191919, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI1787048, Length=151, Percent_Identity=37.7483443708609, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87082356, Length=143, Percent_Identity=36.3636363636364, Blast_Score=88, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17540406, Length=151, Percent_Identity=33.112582781457, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321790, Length=254, Percent_Identity=30.3149606299213, Blast_Score=135, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6322825, Length=247, Percent_Identity=32.7935222672065, Blast_Score=120, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6321903, Length=172, Percent_Identity=26.7441860465116, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582879, Length=151, Percent_Identity=35.0993377483444, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28038; Mature: 27906

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALHRFSRTELLIGSNGLATLKSSHVLICGIGGVGSYAAEALGRAGVGRITLVDCDDIC
CCHHHHHCCCEEEECCCCCEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCHH
LTNVNRQIHALSSTVGRPKVEVMAERLRDINPDAEIVPVKAFFSQENAQELLDPAPDYVL
HHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHHHHHCCCHHHHHHCCCHHHHH
DAIDHFTAKTTLITLCRSRNIPIISSMGAANKLDPTKIHLDDISATRHCRMARSMRKILR
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
QAGIESGVRVVYSTEEHRQLDPASTSHCDNAPVCPQRDDRSFRCENRKVILGSISFIPSI
HCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHH
FGLTMAGAVVGELLSGSW
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SALHRFSRTELLIGSNGLATLKSSHVLICGIGGVGSYAAEALGRAGVGRITLVDCDDIC
CHHHHHCCCEEEECCCCCEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCHH
LTNVNRQIHALSSTVGRPKVEVMAERLRDINPDAEIVPVKAFFSQENAQELLDPAPDYVL
HHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHHHHHCCCHHHHHHCCCHHHHH
DAIDHFTAKTTLITLCRSRNIPIISSMGAANKLDPTKIHLDDISATRHCRMARSMRKILR
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
QAGIESGVRVVYSTEEHRQLDPASTSHCDNAPVCPQRDDRSFRCENRKVILGSISFIPSI
HCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHH
FGLTMAGAVVGELLSGSW
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]