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The map label for this gene is degT [H]

Identifier: 118581428

GI number: 118581428

Start: 3302924

End: 3304021

Strand: Direct

Name: degT [H]

Synonym: Ppro_3023

Alternate gene names: 118581428

Gene position: 3302924-3304021 (Clockwise)

Preceding gene: 118581427

Following gene: 118581429

Centisome position: 82.41

GC content: 64.66

Gene sequence:

>1098_bases
ATGATCCCCATGGTGGATTTGAAAACCCAGTACCACAACCTGAAGGGCGAGATCGACCGCGCCGTTCTGGACGCCCTGGA
GAGCAGCCAGTTCATCCTCGGCCCCAATGTGGCCGCCTTTGAACAGGAGGTGGCCGACTATCTGGGCGCCAACCACGCCG
TGGCCGTCGCCTCCGGCACCGATGCGCTGCACCTGGCGCTCCTGGCCGCCGGTGTCGGGCCGGGGGACGAGGTGATCACC
TCCACCTTCACCTTCATCGCCACCGCCGAGGCGGTGCGCTACCTGGGGGCCACGCCGGTATTCGTGGACATCGATTCCCG
CACCTTCAACATCGATCCGGCGCTGATCGAGCAGGCCATAACCCCCCGCACCAAGGCGGTCATACCGGTACACCTCTTCG
GCCAACCGGCCCACCTGAAGGTCATCACCGAGATCTGCGACCGCCACGGCCTGCTCCTGATCGAGGACTGCGCCCAGTCC
TTCGGAGCGCCCGCCGACGGCAGGAAGACCGGCACCTACGGCGCAGCAGGATGCTACAGTTTCTTTCCCAGCAAGAACCT
GGGCTGCTACGGCGACGGCGGCCTGGTGGTCTGCAAGACGGACGACATGGCCGACAGGCTCAGGATGCTGCGCAATCATG
GCAGCCGCCAGCGCTATCACCACGATGTGATCGGCTTCAACAGCCGCCTGGACGAGATCCAGGCCGCGATCCTGCGCGTC
AAGCTGAGGCGCATCGACGAGTTCAACGAGGGGAGGCGGCGTGTAGCCAGCCTGTACAACGAGCTGCTCTGGGACATGGT
CCAGACGCCGCTGATCGATGGCAACGGGCTGCACGTCTATCACCAGTACACGGTCATGACCAATCACCGCGAACTGATCA
TGGCCAAACTGGCCGAGGCGGGCATCGCCTCGGCGATCTACTACCCCATCCCGCTCCACCGCCAGGCGGTGTTTGCGGAT
GACTACGCCGATGCGATCCTGCCGGTGGCCGAGCATACCGCCAACCGCTGCCTGTCGCTGCCGATCTACCCCGAGATGCC
GGAGGAATCCATCCGGCTGGTGGCGGACACCATATCCGAAGCGCTGATCGGGAGCTGA

Upstream 100 bases:

>100_bases
CCATCAGAAACGGCACCCCGCCGGAGGTGAGCGGCCTGGACGGACGCATGGCCCTCTCCACGGCCCTTACCATCAACAAC
AGTCTTGGCAGGAGACATTC

Downstream 100 bases:

>100_bases
ACCCATGTCTGAACGACGCGTCATGATTGTCGCGGGGGAGGCATCCGGCGACATCTACGGCGCGCAGCTCGCATCGGAAA
CCGCCCGGCTCTCCCCGAAC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIPMVDLKTQYHNLKGEIDRAVLDALESSQFILGPNVAAFEQEVADYLGANHAVAVASGTDALHLALLAAGVGPGDEVIT
STFTFIATAEAVRYLGATPVFVDIDSRTFNIDPALIEQAITPRTKAVIPVHLFGQPAHLKVITEICDRHGLLLIEDCAQS
FGAPADGRKTGTYGAAGCYSFFPSKNLGCYGDGGLVVCKTDDMADRLRMLRNHGSRQRYHHDVIGFNSRLDEIQAAILRV
KLRRIDEFNEGRRRVASLYNELLWDMVQTPLIDGNGLHVYHQYTVMTNHRELIMAKLAEAGIASAIYYPIPLHRQAVFAD
DYADAILPVAEHTANRCLSLPIYPEMPEESIRLVADTISEALIGS

Sequences:

>Translated_365_residues
MIPMVDLKTQYHNLKGEIDRAVLDALESSQFILGPNVAAFEQEVADYLGANHAVAVASGTDALHLALLAAGVGPGDEVIT
STFTFIATAEAVRYLGATPVFVDIDSRTFNIDPALIEQAITPRTKAVIPVHLFGQPAHLKVITEICDRHGLLLIEDCAQS
FGAPADGRKTGTYGAAGCYSFFPSKNLGCYGDGGLVVCKTDDMADRLRMLRNHGSRQRYHHDVIGFNSRLDEIQAAILRV
KLRRIDEFNEGRRRVASLYNELLWDMVQTPLIDGNGLHVYHQYTVMTNHRELIMAKLAEAGIASAIYYPIPLHRQAVFAD
DYADAILPVAEHTANRCLSLPIYPEMPEESIRLVADTISEALIGS
>Mature_365_residues
MIPMVDLKTQYHNLKGEIDRAVLDALESSQFILGPNVAAFEQEVADYLGANHAVAVASGTDALHLALLAAGVGPGDEVIT
STFTFIATAEAVRYLGATPVFVDIDSRTFNIDPALIEQAITPRTKAVIPVHLFGQPAHLKVITEICDRHGLLLIEDCAQS
FGAPADGRKTGTYGAAGCYSFFPSKNLGCYGDGGLVVCKTDDMADRLRMLRNHGSRQRYHHDVIGFNSRLDEIQAAILRV
KLRRIDEFNEGRRRVASLYNELLWDMVQTPLIDGNGLHVYHQYTVMTNHRELIMAKLAEAGIASAIYYPIPLHRQAVFAD
DYADAILPVAEHTANRCLSLPIYPEMPEESIRLVADTISEALIGS

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=346, Percent_Identity=35.8381502890173, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI2367285, Length=338, Percent_Identity=28.9940828402367, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40044; Mature: 40044

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPMVDLKTQYHNLKGEIDRAVLDALESSQFILGPNVAAFEQEVADYLGANHAVAVASGT
CCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCC
DALHLALLAAGVGPGDEVITSTFTFIATAEAVRYLGATPVFVDIDSRTFNIDPALIEQAI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHC
TPRTKAVIPVHLFGQPAHLKVITEICDRHGLLLIEDCAQSFGAPADGRKTGTYGAAGCYS
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHH
FFPSKNLGCYGDGGLVVCKTDDMADRLRMLRNHGSRQRYHHDVIGFNSRLDEIQAAILRV
HCCCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
KLRRIDEFNEGRRRVASLYNELLWDMVQTPLIDGNGLHVYHQYTVMTNHRELIMAKLAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHH
GIASAIYYPIPLHRQAVFADDYADAILPVAEHTANRCLSLPIYPEMPEESIRLVADTISE
HHHHEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHH
ALIGS
HHCCC
>Mature Secondary Structure
MIPMVDLKTQYHNLKGEIDRAVLDALESSQFILGPNVAAFEQEVADYLGANHAVAVASGT
CCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCC
DALHLALLAAGVGPGDEVITSTFTFIATAEAVRYLGATPVFVDIDSRTFNIDPALIEQAI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHC
TPRTKAVIPVHLFGQPAHLKVITEICDRHGLLLIEDCAQSFGAPADGRKTGTYGAAGCYS
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHH
FFPSKNLGCYGDGGLVVCKTDDMADRLRMLRNHGSRQRYHHDVIGFNSRLDEIQAAILRV
HCCCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
KLRRIDEFNEGRRRVASLYNELLWDMVQTPLIDGNGLHVYHQYTVMTNHRELIMAKLAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHH
GIASAIYYPIPLHRQAVFADDYADAILPVAEHTANRCLSLPIYPEMPEESIRLVADTISE
HHHHEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHH
ALIGS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]