| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581371
Identifier: 118581371
GI number: 118581371
Start: 3235981
End: 3237291
Strand: Direct
Name: 118581371
Synonym: Ppro_2966
Alternate gene names: NA
Gene position: 3235981-3237291 (Clockwise)
Preceding gene: 118581370
Following gene: 118581376
Centisome position: 80.74
GC content: 64.76
Gene sequence:
>1311_bases ATGAGGGGACTGCTGATCGAGAGCGTGGTTCCCGGCTCCATCGCCCAGGAAATGGGCATCGCAGCGGGCGACCGGCTGCT GTGCATCAACGGCCAGCGGCTGCGGGACATCATCGACTACAGCTACCAGGCCTCGGGTGACGACGAGCTTCTGCTGGAAG TGATGACACCTGGGCAGGAGCTGTGGGAGTACGAGATCCAACGCGAAGCAGGGGAATCCCTCGGCCTGATCTTTGCCCCC CCCAAACCGGCCCGCTGCCGCAACAACTGCGTCTTCTGCTTCGTCCACCAGCTCCCCAGGGGGCTGCGCAAACCGCTCTA CGTCAAGGATGAGGACTACCGGCTCTCCTTCCTCAACGGGAATTACGTCACCCTGGCGAACCTGAAACAGTCTGAGCTGA GACGCATCGTGGCGCAGCGCCTCTCGCCGCTCTACATCTCCGTCCACAGCACCAACCCGGCCCTGCGCGAACAGCTGCTG GGAAGGGCTGGCATCCCCCCCATACTGGAGCAACTGGAACAGCTTGTCGCCGCCCGCATAACCCTGCACACCCAGGTGGT GCTCTGCCCCGGCCTGAATGACGGCAAAGAACTGGAACGGACCGTATCCGACCTGGCGGGACTTTATCCCGGCGTGCAGT CCCTGGCCGTGGTGCCGCTGGGGCTGACCCGCCACCGTCGAGGACTGCCGCAGCTAAAAGGAGTGGACGGGGAGTACGCG CGGGAATTGCTGCGTTTTTGGGAGCCACGTTGCAGGGAGATAGCCAAACGACTCGGCCAGCCGTTTCTCTTCCTGGCGGA CGAGTTCTACCTCAAGGCGGGACTCCCCTTCCCCCCCCTGCGCAGCTACGGCGATCTGCCGCAGCTGGAGAACGGGGTGG GCATGGTGCCACTCTTCCTGCGTGACGCGGCCCGGACCCTGCGAACAGCCCGACAGCTGGGCTCGTTCCGGGTGACGGTG GTGACCGGCGTCTCCGCATTCAGCTTTGTGAGCGACTTTCTTCGGCACCTGGGGGAAAAGAGCGGGGTGGAGATCCAGCC CCTGGCGGTGGAGAACCGCCTGTTCGGTGAGAGCGTCACCGTCAGCGGACTGGTGGCGGGCAACGACATCATCGCCGCCC TGACCGGCAGGGAGATCGGAACGGCGCTGCTGCTGCCGGATGTCATGCTCAAGGAGGGGGAGGGGCTCTTTCTGGACGAC GTCAGCATGGATGAACTGGGGCAACGCCTGGGTTGCAGGATCGTGGTTTTCGAGGCCACGCCCCAGGGGTGCTACCGGGC CATCAGGGCTCTGGCGCGGAAAGCGCGCTGA
Upstream 100 bases:
>100_bases TGGAGAAACGGGGGACGGGACGGATAGCTGGCATCCTGATCGTTTTCAGCGCCGCCCAGGCCGACTATTACCGTAGTTCG CCCTGCTACCGGGGCGCATT
Downstream 100 bases:
>100_bases GGGTGGGAAGCGCCGGGTGCAGGGTCATTTTCCCAGCAGTTCCTCGATCCTGGCCCGGTCGAAACCGGTCAGGATCCGGC CGTTGATCATGAAGGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MRGLLIESVVPGSIAQEMGIAAGDRLLCINGQRLRDIIDYSYQASGDDELLLEVMTPGQELWEYEIQREAGESLGLIFAP PKPARCRNNCVFCFVHQLPRGLRKPLYVKDEDYRLSFLNGNYVTLANLKQSELRRIVAQRLSPLYISVHSTNPALREQLL GRAGIPPILEQLEQLVAARITLHTQVVLCPGLNDGKELERTVSDLAGLYPGVQSLAVVPLGLTRHRRGLPQLKGVDGEYA RELLRFWEPRCREIAKRLGQPFLFLADEFYLKAGLPFPPLRSYGDLPQLENGVGMVPLFLRDAARTLRTARQLGSFRVTV VTGVSAFSFVSDFLRHLGEKSGVEIQPLAVENRLFGESVTVSGLVAGNDIIAALTGREIGTALLLPDVMLKEGEGLFLDD VSMDELGQRLGCRIVVFEATPQGCYRAIRALARKAR
Sequences:
>Translated_436_residues MRGLLIESVVPGSIAQEMGIAAGDRLLCINGQRLRDIIDYSYQASGDDELLLEVMTPGQELWEYEIQREAGESLGLIFAP PKPARCRNNCVFCFVHQLPRGLRKPLYVKDEDYRLSFLNGNYVTLANLKQSELRRIVAQRLSPLYISVHSTNPALREQLL GRAGIPPILEQLEQLVAARITLHTQVVLCPGLNDGKELERTVSDLAGLYPGVQSLAVVPLGLTRHRRGLPQLKGVDGEYA RELLRFWEPRCREIAKRLGQPFLFLADEFYLKAGLPFPPLRSYGDLPQLENGVGMVPLFLRDAARTLRTARQLGSFRVTV VTGVSAFSFVSDFLRHLGEKSGVEIQPLAVENRLFGESVTVSGLVAGNDIIAALTGREIGTALLLPDVMLKEGEGLFLDD VSMDELGQRLGCRIVVFEATPQGCYRAIRALARKAR >Mature_436_residues MRGLLIESVVPGSIAQEMGIAAGDRLLCINGQRLRDIIDYSYQASGDDELLLEVMTPGQELWEYEIQREAGESLGLIFAP PKPARCRNNCVFCFVHQLPRGLRKPLYVKDEDYRLSFLNGNYVTLANLKQSELRRIVAQRLSPLYISVHSTNPALREQLL GRAGIPPILEQLEQLVAARITLHTQVVLCPGLNDGKELERTVSDLAGLYPGVQSLAVVPLGLTRHRRGLPQLKGVDGEYA RELLRFWEPRCREIAKRLGQPFLFLADEFYLKAGLPFPPLRSYGDLPQLENGVGMVPLFLRDAARTLRTARQLGSFRVTV VTGVSAFSFVSDFLRHLGEKSGVEIQPLAVENRLFGESVTVSGLVAGNDIIAALTGREIGTALLLPDVMLKEGEGLFLDD VSMDELGQRLGCRIVVFEATPQGCYRAIRALARKAR
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48331; Mature: 48331
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLLIESVVPGSIAQEMGIAAGDRLLCINGQRLRDIIDYSYQASGDDELLLEVMTPGQE CCCCEECCCCCCHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCEEEEECCCCHH LWEYEIQREAGESLGLIFAPPKPARCRNNCVFCFVHQLPRGLRKPLYVKDEDYRLSFLNG HHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCEEECCCCCEEEEECC NYVTLANLKQSELRRIVAQRLSPLYISVHSTNPALREQLLGRAGIPPILEQLEQLVAARI CEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH TLHTQVVLCPGLNDGKELERTVSDLAGLYPGVQSLAVVPLGLTRHRRGLPQLKGVDGEYA HEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCHHHHHCCCCCCCCCCHHHH RELLRFWEPRCREIAKRLGQPFLFLADEFYLKAGLPFPPLRSYGDLPQLENGVGMVPLFL HHHHHHHCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RDAARTLRTARQLGSFRVTVVTGVSAFSFVSDFLRHLGEKSGVEIQPLAVENRLFGESVT HHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHCCCCEE VSGLVAGNDIIAALTGREIGTALLLPDVMLKEGEGLFLDDVSMDELGQRLGCRIVVFEAT EEEEEECCCEEEEECCCHHCHHHHCCHHHHHCCCCEEEECCCHHHHHHHHCCEEEEEECC PQGCYRAIRALARKAR CHHHHHHHHHHHHHCC >Mature Secondary Structure MRGLLIESVVPGSIAQEMGIAAGDRLLCINGQRLRDIIDYSYQASGDDELLLEVMTPGQE CCCCEECCCCCCHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCEEEEECCCCHH LWEYEIQREAGESLGLIFAPPKPARCRNNCVFCFVHQLPRGLRKPLYVKDEDYRLSFLNG HHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCEEECCCCCEEEEECC NYVTLANLKQSELRRIVAQRLSPLYISVHSTNPALREQLLGRAGIPPILEQLEQLVAARI CEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH TLHTQVVLCPGLNDGKELERTVSDLAGLYPGVQSLAVVPLGLTRHRRGLPQLKGVDGEYA HEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCHHHHHCCCCCCCCCCHHHH RELLRFWEPRCREIAKRLGQPFLFLADEFYLKAGLPFPPLRSYGDLPQLENGVGMVPLFL HHHHHHHCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RDAARTLRTARQLGSFRVTVVTGVSAFSFVSDFLRHLGEKSGVEIQPLAVENRLFGESVT HHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHCCCCEE VSGLVAGNDIIAALTGREIGTALLLPDVMLKEGEGLFLDDVSMDELGQRLGCRIVVFEAT EEEEEECCCEEEEECCCHHCHHHHCCHHHHHCCCCEEEECCCHHHHHHHHCCEEEEEECC PQGCYRAIRALARKAR CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA