Click here to switch to the map view.

The map label for this gene is ybhG [C]

Identifier: 118581309

GI number: 118581309

Start: 3177148

End: 3178137

Strand: Direct

Name: ybhG [C]

Synonym: Ppro_2904

Alternate gene names: 118581309

Gene position: 3177148-3178137 (Clockwise)

Preceding gene: 118581305

Following gene: 118581310

Centisome position: 79.27

GC content: 67.98

Gene sequence:

>990_bases
ATGAAGAGGAAGGTTCTGATTGCGCTGCTGCTCGGCATCACCGTGGCTGCAACGCTGTTTTTCGTGTTCCGGCGCCCCTC
CGGAAGGGAGGATGGGCTCAAGGTGTCCGGTACCATCGAAGTCACCTCCGTGGAACTCTCCTTCAAGGTCGGCGGCCGGA
TGAGCCGGCGCTTGGTGGACGAGGGAGAGATGGTGACAGCCGGACAACTGGTGGCCCAACTGGAGGACGACGAACTGCGT
GAGGAGCTGAACACCCGTTCGGCCGAACAGCGAGCGGCCAGGGCCATGCTGGCGGACCTCAAGGCCGGCAGCCGCCGCGA
GGAGATCAGGCAGGGGGAAGAGGTACTGGCGCGCACAAGGGCCGAGGCCGAGCGGCTCTCCCGCGACGCCCTGCGCATGG
AAAAGCTCTACCGGCGCGATGTCATCCCGCTCAGGGAGCTAGAGGCGGCCCGTGCCGGCCGCGACTCATCCGCGGCCGCG
GTGCGTGAGGCAGAGGAGCGCCTGCGGCTGCTGCGCATCGGTCCCCGCCCCGATGCGGTGCGGGAGCGGAGCGCCCGGGT
CGAGGCGGCCGAGGCCGGCCTCTCCCTGGCCGAGACGCGGCTCTCCCACAGCATCCTCAACGCCCCGGCGGCCGGACTGA
TCCTGTCCAAGCACGCCGAAGCGGGCGAGATGCTGGCCCCCGGTTCACCGGTGCTCACCCTGGGGGTGATGGATCAGGTC
TGGCTGCGGGCTTACATCCCCGAGGGCGATTTGGGACGGGTGGTGGTGGGACAGAAGGCGCGGGTCAGCGTCGACTCCTG
GCCGGGACGCTCCTTCCCGGGGCGGGTCAGCTTCATATCGTCCCAGGCCGAATTCACCCCCAAGAACGTGCAGACCGAGA
AGGAGCGGGTCAAGCTGGTCTACCGCATCAAGATCACCCTGGACAACCCGAAGATGGAGCTGAAACCGGGCATGCCGGCC
GACGCGCTGATCGAGACCAGCTCCCCGTGA

Upstream 100 bases:

>100_bases
ACATCCCCGGCAAGAGCGGGCATTACCTATTCTCTGTACCCGGTAGTAGTATAGTGGGAATGCAACGGTTACTCCGTTAC
CCCCGAAGGGAGAGTCTCAG

Downstream 100 bases:

>100_bases
CCGTCATCGCCCACAACCTGACCAGGCGCTTCGGCGACCTGACCGCCGTCGACTCCCTCTCCCTCTCCATCTCCGAAGGA
GAGCTGTTCGGGCTGGTCGG

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKRKVLIALLLGITVAATLFFVFRRPSGREDGLKVSGTIEVTSVELSFKVGGRMSRRLVDEGEMVTAGQLVAQLEDDELR
EELNTRSAEQRAARAMLADLKAGSRREEIRQGEEVLARTRAEAERLSRDALRMEKLYRRDVIPLRELEAARAGRDSSAAA
VREAEERLRLLRIGPRPDAVRERSARVEAAEAGLSLAETRLSHSILNAPAAGLILSKHAEAGEMLAPGSPVLTLGVMDQV
WLRAYIPEGDLGRVVVGQKARVSVDSWPGRSFPGRVSFISSQAEFTPKNVQTEKERVKLVYRIKITLDNPKMELKPGMPA
DALIETSSP

Sequences:

>Translated_329_residues
MKRKVLIALLLGITVAATLFFVFRRPSGREDGLKVSGTIEVTSVELSFKVGGRMSRRLVDEGEMVTAGQLVAQLEDDELR
EELNTRSAEQRAARAMLADLKAGSRREEIRQGEEVLARTRAEAERLSRDALRMEKLYRRDVIPLRELEAARAGRDSSAAA
VREAEERLRLLRIGPRPDAVRERSARVEAAEAGLSLAETRLSHSILNAPAAGLILSKHAEAGEMLAPGSPVLTLGVMDQV
WLRAYIPEGDLGRVVVGQKARVSVDSWPGRSFPGRVSFISSQAEFTPKNVQTEKERVKLVYRIKITLDNPKMELKPGMPA
DALIETSSP
>Mature_329_residues
MKRKVLIALLLGITVAATLFFVFRRPSGREDGLKVSGTIEVTSVELSFKVGGRMSRRLVDEGEMVTAGQLVAQLEDDELR
EELNTRSAEQRAARAMLADLKAGSRREEIRQGEEVLARTRAEAERLSRDALRMEKLYRRDVIPLRELEAARAGRDSSAAA
VREAEERLRLLRIGPRPDAVRERSARVEAAEAGLSLAETRLSHSILNAPAAGLILSKHAEAGEMLAPGSPVLTLGVMDQV
WLRAYIPEGDLGRVVVGQKARVSVDSWPGRSFPGRVSFISSQAEFTPKNVQTEKERVKLVYRIKITLDNPKMELKPGMPA
DALIETSSP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=319, Percent_Identity=33.2288401253918, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1789900, Length=339, Percent_Identity=28.6135693215339, Blast_Score=118, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 36283; Mature: 36283

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVLIALLLGITVAATLFFVFRRPSGREDGLKVSGTIEVTSVELSFKVGGRMSRRLVD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEECCHHHHHHHC
EGEMVTAGQLVAQLEDDELREELNTRSAEQRAARAMLADLKAGSRREEIRQGEEVLARTR
CCCEEEHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AEAERLSRDALRMEKLYRRDVIPLRELEAARAGRDSSAAAVREAEERLRLLRIGPRPDAV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCHHH
RERSARVEAAEAGLSLAETRLSHSILNAPAAGLILSKHAEAGEMLAPGSPVLTLGVMDQV
HHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCCEEEEHHHHHH
WLRAYIPEGDLGRVVVGQKARVSVDSWPGRSFPGRVSFISSQAEFTPKNVQTEKERVKLV
HHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHEEEE
YRIKITLDNPKMELKPGMPADALIETSSP
EEEEEEECCCCEEECCCCCHHHEEECCCC
>Mature Secondary Structure
MKRKVLIALLLGITVAATLFFVFRRPSGREDGLKVSGTIEVTSVELSFKVGGRMSRRLVD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEECCHHHHHHHC
EGEMVTAGQLVAQLEDDELREELNTRSAEQRAARAMLADLKAGSRREEIRQGEEVLARTR
CCCEEEHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AEAERLSRDALRMEKLYRRDVIPLRELEAARAGRDSSAAAVREAEERLRLLRIGPRPDAV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCHHH
RERSARVEAAEAGLSLAETRLSHSILNAPAAGLILSKHAEAGEMLAPGSPVLTLGVMDQV
HHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCCEEEEHHHHHH
WLRAYIPEGDLGRVVVGQKARVSVDSWPGRSFPGRVSFISSQAEFTPKNVQTEKERVKLV
HHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHEEEE
YRIKITLDNPKMELKPGMPADALIETSSP
EEEEEEECCCCEEECCCCCHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA