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The map label for this gene is 118581259

Identifier: 118581259

GI number: 118581259

Start: 3122657

End: 3124045

Strand: Reverse

Name: 118581259

Synonym: Ppro_2853

Alternate gene names: NA

Gene position: 3124045-3122657 (Counterclockwise)

Preceding gene: 118581262

Following gene: 118581258

Centisome position: 77.95

GC content: 65.01

Gene sequence:

>1389_bases
TTGGCGAGCCCTGCCGCGAGCGGGGAGTTGCAGGGAAAGATCCGGGAATTGAGCGAGAGGGTGTACCGGCATCCCCTGCT
CCCGGAGAAGTCTATACGACTTGGTTTTTCCACGCTCGAACGCTGGTACTACCAGGCGAAGGACGCCGCGGACCCGATCG
CTGCGCTGAGTCGCAAGGCGCGTTCGGACGCCGGGTGTCAGATTGCGCTGTCCGAGGCGCTCTTGAGCGCCCTGGAAGTG
CAGTATGCCAGGTATCCTCGCTGGACGGTGCAACTGCACTACGACAACCTTGCCGCCGAAGTGGCCCAAAAGCCCCAGAT
GGGAGCCTTGCCGAGCTACCAGAGCGTGCTTCGCCGAATGCGGGAGAAGGGGTGGCAGAAAAGGCGCGAGCCCGCGAACC
CGACCGAAGGACAACGCCGCGCCGTCCGGCGCCGCGAAAGCCGTGAGATTCGCGGCTATGAGGCGAGCCACGTGCACGCC
CTGTGGCACCTCGACTTCCACCAGGGAAGCCTCAAGGTGCTGGACGAGGAGGGGGGCTGGCAGACGCCCCTGGTGTGCGC
GGTTCTGGACGACCGGAGCAGGCTCTGCTGCCATCTGCAGTGGTATCTGGCGGAAAGCGCCCAGAACCTCGCGCATGCTC
TCACGCAGGCGATGCTGAAACGTGGGCTTCCCAGGGCTCTGATGACCGATAATGGAAGCGCGATGCTGGCGGAGGAAACC
CGGGAGGGGCTGGCCCGACTCGGGGTGAGCCACGACACAACCCTTCCTTACTCGCCCTATATGAACGGGAAACAGGAGGT
GTTCTGGGCGCAGCTTGAGGGACGTCTCATGGAGCTTTTGCGCGGGGTGAGCCCCTTGCGGCTGGAGTTCCTCAACCGCA
CCACCCAGGCGTGGGTCGAACAGGACTATCACCGCCGTACCCACAGCGAGATCGGCTGCGCTCCGATCGAGCGCCTGCTC
GCCGGACCGGAGGTCTCCCGCTCGGCTCCCGACATGGACTCCTTGAATCTCGCCTTCACCCGCCAGGTTACGCGCACCCA
GCGCAAAAGCGATGCAACCGTGACGGTCGAGGGGGTGCGCTTCGAGGTCCCGTCGCGGTTCAGGCATCTCCCCCGCCTGA
CGTTACGCCATGCCGGTTGGGACGTAAGCCGGATGGTTCTAGTGGATCCCGACAGCTGCAATCCCTTGGCCCGGCTGCTC
CCCCAGGACAAGGAGAAAAACGCCTCCGGTCAGCGCCGCACTCTGGAACCGGTTGCGGCGCAGTCGGCCCAGGCGAACGC
CTCACCCGAGGAGATGCCCGCACTGCTTCGCAAGTGGCTGGCGGATTACGCCGCCACCGGGCTTCCACCGGCCTATCTTG
CCGTGAAGGAGGGTCCCGATGAACGATAA

Upstream 100 bases:

>100_bases
CCGCTTTTGGGACATTATTGCACTACCATTGACAATGAAGAAGAATGTAGTCCCGAAGCAGCGCTGGGCCAGGTTTCGGC
TGCAGGTGATCGGACCGCTA

Downstream 100 bases:

>100_bases
GACTCTCCTGGCCCTCTACGGGCTCAAGTACAACCCGTTCGTGCCGGCGCTTCCCGTGGAGGCGCTCTGGCCGCTGCCGG
GCGCCGAACTCTTTGCCCGG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; ISChy3 Transposase; ISChy6 Transposase; Transposase /Integrase Family Protein; Integrase; Insertion Element ISRme2 Protein; Integrase Family Protein

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MASPAASGELQGKIRELSERVYRHPLLPEKSIRLGFSTLERWYYQAKDAADPIAALSRKARSDAGCQIALSEALLSALEV
QYARYPRWTVQLHYDNLAAEVAQKPQMGALPSYQSVLRRMREKGWQKRREPANPTEGQRRAVRRRESREIRGYEASHVHA
LWHLDFHQGSLKVLDEEGGWQTPLVCAVLDDRSRLCCHLQWYLAESAQNLAHALTQAMLKRGLPRALMTDNGSAMLAEET
REGLARLGVSHDTTLPYSPYMNGKQEVFWAQLEGRLMELLRGVSPLRLEFLNRTTQAWVEQDYHRRTHSEIGCAPIERLL
AGPEVSRSAPDMDSLNLAFTRQVTRTQRKSDATVTVEGVRFEVPSRFRHLPRLTLRHAGWDVSRMVLVDPDSCNPLARLL
PQDKEKNASGQRRTLEPVAAQSAQANASPEEMPALLRKWLADYAATGLPPAYLAVKEGPDER

Sequences:

>Translated_462_residues
MASPAASGELQGKIRELSERVYRHPLLPEKSIRLGFSTLERWYYQAKDAADPIAALSRKARSDAGCQIALSEALLSALEV
QYARYPRWTVQLHYDNLAAEVAQKPQMGALPSYQSVLRRMREKGWQKRREPANPTEGQRRAVRRRESREIRGYEASHVHA
LWHLDFHQGSLKVLDEEGGWQTPLVCAVLDDRSRLCCHLQWYLAESAQNLAHALTQAMLKRGLPRALMTDNGSAMLAEET
REGLARLGVSHDTTLPYSPYMNGKQEVFWAQLEGRLMELLRGVSPLRLEFLNRTTQAWVEQDYHRRTHSEIGCAPIERLL
AGPEVSRSAPDMDSLNLAFTRQVTRTQRKSDATVTVEGVRFEVPSRFRHLPRLTLRHAGWDVSRMVLVDPDSCNPLARLL
PQDKEKNASGQRRTLEPVAAQSAQANASPEEMPALLRKWLADYAATGLPPAYLAVKEGPDER
>Mature_461_residues
ASPAASGELQGKIRELSERVYRHPLLPEKSIRLGFSTLERWYYQAKDAADPIAALSRKARSDAGCQIALSEALLSALEVQ
YARYPRWTVQLHYDNLAAEVAQKPQMGALPSYQSVLRRMREKGWQKRREPANPTEGQRRAVRRRESREIRGYEASHVHAL
WHLDFHQGSLKVLDEEGGWQTPLVCAVLDDRSRLCCHLQWYLAESAQNLAHALTQAMLKRGLPRALMTDNGSAMLAEETR
EGLARLGVSHDTTLPYSPYMNGKQEVFWAQLEGRLMELLRGVSPLRLEFLNRTTQAWVEQDYHRRTHSEIGCAPIERLLA
GPEVSRSAPDMDSLNLAFTRQVTRTQRKSDATVTVEGVRFEVPSRFRHLPRLTLRHAGWDVSRMVLVDPDSCNPLARLLP
QDKEKNASGQRRTLEPVAAQSAQANASPEEMPALLRKWLADYAATGLPPAYLAVKEGPDER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52265; Mature: 52134

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPAASGELQGKIRELSERVYRHPLLPEKSIRLGFSTLERWYYQAKDAADPIAALSRKA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RSDAGCQIALSEALLSALEVQYARYPRWTVQLHYDNLAAEVAQKPQMGALPSYQSVLRRM
CCCCCCEEHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHH
REKGWQKRREPANPTEGQRRAVRRRESREIRGYEASHVHALWHLDFHQGSLKVLDEEGGW
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCC
QTPLVCAVLDDRSRLCCHLQWYLAESAQNLAHALTQAMLKRGLPRALMTDNGSAMLAEET
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEHHHH
REGLARLGVSHDTTLPYSPYMNGKQEVFWAQLEGRLMELLRGVSPLRLEFLNRTTQAWVE
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QDYHRRTHSEIGCAPIERLLAGPEVSRSAPDMDSLNLAFTRQVTRTQRKSDATVTVEGVR
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECEE
FEVPSRFRHLPRLTLRHAGWDVSRMVLVDPDSCNPLARLLPQDKEKNASGQRRTLEPVAA
ECCCHHHHHCCHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH
QSAQANASPEEMPALLRKWLADYAATGLPPAYLAVKEGPDER
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
ASPAASGELQGKIRELSERVYRHPLLPEKSIRLGFSTLERWYYQAKDAADPIAALSRKA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RSDAGCQIALSEALLSALEVQYARYPRWTVQLHYDNLAAEVAQKPQMGALPSYQSVLRRM
CCCCCCEEHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHH
REKGWQKRREPANPTEGQRRAVRRRESREIRGYEASHVHALWHLDFHQGSLKVLDEEGGW
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCC
QTPLVCAVLDDRSRLCCHLQWYLAESAQNLAHALTQAMLKRGLPRALMTDNGSAMLAEET
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEHHHH
REGLARLGVSHDTTLPYSPYMNGKQEVFWAQLEGRLMELLRGVSPLRLEFLNRTTQAWVE
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QDYHRRTHSEIGCAPIERLLAGPEVSRSAPDMDSLNLAFTRQVTRTQRKSDATVTVEGVR
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECEE
FEVPSRFRHLPRLTLRHAGWDVSRMVLVDPDSCNPLARLLPQDKEKNASGQRRTLEPVAA
ECCCHHHHHCCHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH
QSAQANASPEEMPALLRKWLADYAATGLPPAYLAVKEGPDER
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA