| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581228
Identifier: 118581228
GI number: 118581228
Start: 3089911
End: 3090675
Strand: Reverse
Name: 118581228
Synonym: Ppro_2822
Alternate gene names: NA
Gene position: 3090675-3089911 (Counterclockwise)
Preceding gene: 118581229
Following gene: 118581225
Centisome position: 77.11
GC content: 60.52
Gene sequence:
>765_bases ATGCCGGCTAGATGCACTATGGTTGTGGCCATGACAGTCGTCGTTTCCGTCGTGCTGTTGGTGCTCTCCTCCACTGTGGG GGCTTTCCCCGTTCCCGAGCGGCTCGAATTCGAGATACGCTATGCCAGTATCCCGGCCGGGGCTGCGGTGCAGGAGGTGA CCAGGTCCGGCCATGAGGTGCATATCGTCTCCACCGTCCGTTCCGCCACATGGTTGAAGCTGTTGTTCCCGGTGGACGAT CGTGTGGAATCCATTCTGGCTCCAGCCACCCCTCCCCAGCTGTTCGGGCCGTCGCGCCTGTACAGCGAGCGTATCAGGGA GGGGTGGGCGCGGCGCCACAGGGATGCGCGTTTCGACCGGCAAAAGCATGAGGTCGTCAGCAGGGATTTTCTGAAGAAGA AGGAGACGCTCCAGCAGATCCCCCCCCAGACCCATGACCTGCTCTCCGGTTTTTTCCATCTGCGCATGATTCCGCTCCAG GTTGGAGAATCTCGGTTTATCGAAATCTTCGACTGCGAGAAGACCTGGAACACCGAGGTGCAGGTGTTGCGGCGGGAAGA GATCTCCACGCCCCTGGGGCGCTTCAGGACGATCGTGATCAAGCCTCTGCTGAAGACGCCGGGCATATTCAACCGGAGCG GAGACATGTTCATCTGGCTGACCGACGATGACCGGCGCATACCGGTGCAGATGAAATCAAAGGTGCGGCTGGGGAGTGTC ACGGCGATACTGGTGGGGGGCTCCTACTGGCCGGAGAAGAGGTGA
Upstream 100 bases:
>100_bases GAGGAGCTTCACAAGGCGCGCGCCTCCTTCGAGAATTCAGCGGCGGCTGGCCAGGCATAGTGCACGTCGGCAGGATCGGA CAGTGACAAGGAGCAGGCTG
Downstream 100 bases:
>100_bases TCCCGCTCCCTCTGGCAAGGATGTACCCTCATTGGTCAGGTTTGGCCGCACCGGGGTAACCGGTGGGACAGAGAAGCTCA AAGGCCGGTCTCCGTGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MPARCTMVVAMTVVVSVVLLVLSSTVGAFPVPERLEFEIRYASIPAGAAVQEVTRSGHEVHIVSTVRSATWLKLLFPVDD RVESILAPATPPQLFGPSRLYSERIREGWARRHRDARFDRQKHEVVSRDFLKKKETLQQIPPQTHDLLSGFFHLRMIPLQ VGESRFIEIFDCEKTWNTEVQVLRREEISTPLGRFRTIVIKPLLKTPGIFNRSGDMFIWLTDDDRRIPVQMKSKVRLGSV TAILVGGSYWPEKR
Sequences:
>Translated_254_residues MPARCTMVVAMTVVVSVVLLVLSSTVGAFPVPERLEFEIRYASIPAGAAVQEVTRSGHEVHIVSTVRSATWLKLLFPVDD RVESILAPATPPQLFGPSRLYSERIREGWARRHRDARFDRQKHEVVSRDFLKKKETLQQIPPQTHDLLSGFFHLRMIPLQ VGESRFIEIFDCEKTWNTEVQVLRREEISTPLGRFRTIVIKPLLKTPGIFNRSGDMFIWLTDDDRRIPVQMKSKVRLGSV TAILVGGSYWPEKR >Mature_253_residues PARCTMVVAMTVVVSVVLLVLSSTVGAFPVPERLEFEIRYASIPAGAAVQEVTRSGHEVHIVSTVRSATWLKLLFPVDDR VESILAPATPPQLFGPSRLYSERIREGWARRHRDARFDRQKHEVVSRDFLKKKETLQQIPPQTHDLLSGFFHLRMIPLQV GESRFIEIFDCEKTWNTEVQVLRREEISTPLGRFRTIVIKPLLKTPGIFNRSGDMFIWLTDDDRRIPVQMKSKVRLGSVT AILVGGSYWPEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29073; Mature: 28942
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARCTMVVAMTVVVSVVLLVLSSTVGAFPVPERLEFEIRYASIPAGAAVQEVTRSGHEV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCEE HIVSTVRSATWLKLLFPVDDRVESILAPATPPQLFGPSRLYSERIREGWARRHRDARFDR EEEEHHHHHEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QKHEVVSRDFLKKKETLQQIPPQTHDLLSGFFHLRMIPLQVGESRFIEIFDCEKTWNTEV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEHEECCCCCEEEEEECCCCCCHHH QVLRREEISTPLGRFRTIVIKPLLKTPGIFNRSGDMFIWLTDDDRRIPVQMKSKVRLGSV HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEECCE TAILVGGSYWPEKR EEEEECCCCCCCCC >Mature Secondary Structure PARCTMVVAMTVVVSVVLLVLSSTVGAFPVPERLEFEIRYASIPAGAAVQEVTRSGHEV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCEE HIVSTVRSATWLKLLFPVDDRVESILAPATPPQLFGPSRLYSERIREGWARRHRDARFDR EEEEHHHHHEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QKHEVVSRDFLKKKETLQQIPPQTHDLLSGFFHLRMIPLQVGESRFIEIFDCEKTWNTEV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEHEECCCCCEEEEEECCCCCCHHH QVLRREEISTPLGRFRTIVIKPLLKTPGIFNRSGDMFIWLTDDDRRIPVQMKSKVRLGSV HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEECCE TAILVGGSYWPEKR EEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA