| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ushA [C]
Identifier: 118581207
GI number: 118581207
Start: 3065259
End: 3067064
Strand: Direct
Name: ushA [C]
Synonym: Ppro_2800
Alternate gene names: 118581207
Gene position: 3065259-3067064 (Clockwise)
Preceding gene: 118581182
Following gene: 118581211
Centisome position: 76.48
GC content: 59.58
Gene sequence:
>1806_bases ATGGGAAACAGGGGAATAAAATCGTTTGGCATGACAACGTGGTATATGTTTTTAGCCGGCATGCTCATGTTGCTGCACGC CTGCGGAACAATCACCTCCACGGGCTACACGCTGGCAATCGCCCACCTGAACGATACCCACTCTCACCTGGAAACGGCGC CGGTCACCCTGACCATCGATGGCATGGCTACTACGGTGCAACTGGGCGGTTTCCCGCGCCTGCGGACCCTGGTGGACGAA ATGCGGGCCGACAACCCCAACTTTCTTTTACTACATGCCGGGGACGCGTTGCAGGGGACTCTCTACTTCACCCTCTTCGC TGGCGCGGTTGAGTTCGATTTTCTTAATCGCCTTGGCATTGATGCCATGGTCTTCGGCAATCATGAATTCGACAGGGGAA CGGGCGCCATTCCCGGCTTTCTGGATCGCGCCACATTTCCGCTGATCTCCGCCAATATTGATTTCAGCGCCGAGCACACC ATTGTTGAACGTGTTCCCCGGCATATCATCAGGGAGATCAACGGGGAGAGGGTCGGCATATTCGGACTGACCACGGAAAC AACCCCCCAGAGTACGCTTGATGTGGGCAAGGCCAGGTTTCTCGACACGGTCGCGACTGCCCGGCACCAGGTGGCTGAAC TCGAGAAACAGGGAGTCAACAAGATCATCGCCCTGACCCACTTGGGGTACAACGCCGACATGCTGCTTGCCGCCGCCGTG AACGGGATCGACGTAATCGTTGGCGGCCACAGCCATACGCTGCTGGGTGACCGGAACCGACTGAATAGCATCGGGCTTGT AGCGGAAGGTTCCTATCCAACGGTAGTGACAACGCCCGATGGTGGCAGAACGATGGTGCTGCAGGCCTGGCAGTGGGGAC ATGTGCTGGGAAACGTGCGGGTTGTCTTCGATTCAGTCGGCAGGGTAAGGAATCATACCTCTGCGGCCGTAATGCCGCTG GGAGACAGATTCATGAAAGACGGAGTCCCGATTTCGGCTAACTCACCTGAGCAGCAGAAGATTGTGGAGGCGCTGCGCTC CAGCGGAATAGCCCGGATCGTAGGAGAGGACGAATCGACCCTGGCCGCCCTGGCCCCCTTCAGCGCGCAACTGGCGGCAT TCCGCTCACAGCCTGTAGCACGGGCACTGGAGGATCTGACGAGGAGCATGAACCGCGGCCCCGGCCCTCTGGCAGCCGAT TCCATGCTGGCCGCCGTTCCCGAGGCACAGGCGGCACTGCTCAATTATGGTGCGGTACGCAGGGACCTGCTGGCCGGCAT CATTTCCGCCGGCGATGTGCTGGAAGTGATGCCCTTTGGCAACACCCTGGTGCTGGTTGAACTAACGGGAGCGGAGTTGA AGGACGCCCTGGAGGAGGGGATCGAGTTTCTGCAGACAAAACATGGGCGCAACGCCACGGCACTGCCCCATGTGGCCGGC ATGAGCTTCACTGTCGCGCCTTCGGCGGAAAGGGGGGATCGCGTAGGGGCACTGTCGATCAGGGGAAGCGACGGCAGCTA CCGGCCGATTGAGCCGTCCGCCAGCTATCGCACGGTAGTCAACAGCTTTCTCGCAGGAGGCGGTGACGGTTTCAGCACAT TGCGAAACGCTGGGGGGCATCGAAACGAAACCGGAATACTGGACAGTGATGCATTCCGCGACCATCTGAAAAAACTCGGC ACAGTGCGCAATCCAGACGAACAGAGGATCAGGGTAATCGGCGCTCCCACGACATCCATAAACCCGCGCCGCCCTGCGGA CAACTATGTTTTGCCACGGCTGACAGCCGCGGCAGCCTTCCGTTGA
Upstream 100 bases:
>100_bases CCGAACTGATTGCCACATACCGAACACAACACCCGCAGCTTCTCGGTACATACCGTACCGATCATTGAGATACAACTTCA CTGCCAGGGGGTAAGGATAG
Downstream 100 bases:
>100_bases GTCGCGAAGATCAGGCCCTGATCATGATCAGCAGCATCTTGAACCGTTTGACCGCCTTGAGCGCATGAGGGTGATTAGCC GGCATAATGAACATCTGGCC
Product: 5'-nucleotidase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MGNRGIKSFGMTTWYMFLAGMLMLLHACGTITSTGYTLAIAHLNDTHSHLETAPVTLTIDGMATTVQLGGFPRLRTLVDE MRADNPNFLLLHAGDALQGTLYFTLFAGAVEFDFLNRLGIDAMVFGNHEFDRGTGAIPGFLDRATFPLISANIDFSAEHT IVERVPRHIIREINGERVGIFGLTTETTPQSTLDVGKARFLDTVATARHQVAELEKQGVNKIIALTHLGYNADMLLAAAV NGIDVIVGGHSHTLLGDRNRLNSIGLVAEGSYPTVVTTPDGGRTMVLQAWQWGHVLGNVRVVFDSVGRVRNHTSAAVMPL GDRFMKDGVPISANSPEQQKIVEALRSSGIARIVGEDESTLAALAPFSAQLAAFRSQPVARALEDLTRSMNRGPGPLAAD SMLAAVPEAQAALLNYGAVRRDLLAGIISAGDVLEVMPFGNTLVLVELTGAELKDALEEGIEFLQTKHGRNATALPHVAG MSFTVAPSAERGDRVGALSIRGSDGSYRPIEPSASYRTVVNSFLAGGGDGFSTLRNAGGHRNETGILDSDAFRDHLKKLG TVRNPDEQRIRVIGAPTTSINPRRPADNYVLPRLTAAAAFR
Sequences:
>Translated_601_residues MGNRGIKSFGMTTWYMFLAGMLMLLHACGTITSTGYTLAIAHLNDTHSHLETAPVTLTIDGMATTVQLGGFPRLRTLVDE MRADNPNFLLLHAGDALQGTLYFTLFAGAVEFDFLNRLGIDAMVFGNHEFDRGTGAIPGFLDRATFPLISANIDFSAEHT IVERVPRHIIREINGERVGIFGLTTETTPQSTLDVGKARFLDTVATARHQVAELEKQGVNKIIALTHLGYNADMLLAAAV NGIDVIVGGHSHTLLGDRNRLNSIGLVAEGSYPTVVTTPDGGRTMVLQAWQWGHVLGNVRVVFDSVGRVRNHTSAAVMPL GDRFMKDGVPISANSPEQQKIVEALRSSGIARIVGEDESTLAALAPFSAQLAAFRSQPVARALEDLTRSMNRGPGPLAAD SMLAAVPEAQAALLNYGAVRRDLLAGIISAGDVLEVMPFGNTLVLVELTGAELKDALEEGIEFLQTKHGRNATALPHVAG MSFTVAPSAERGDRVGALSIRGSDGSYRPIEPSASYRTVVNSFLAGGGDGFSTLRNAGGHRNETGILDSDAFRDHLKKLG TVRNPDEQRIRVIGAPTTSINPRRPADNYVLPRLTAAAAFR >Mature_600_residues GNRGIKSFGMTTWYMFLAGMLMLLHACGTITSTGYTLAIAHLNDTHSHLETAPVTLTIDGMATTVQLGGFPRLRTLVDEM RADNPNFLLLHAGDALQGTLYFTLFAGAVEFDFLNRLGIDAMVFGNHEFDRGTGAIPGFLDRATFPLISANIDFSAEHTI VERVPRHIIREINGERVGIFGLTTETTPQSTLDVGKARFLDTVATARHQVAELEKQGVNKIIALTHLGYNADMLLAAAVN GIDVIVGGHSHTLLGDRNRLNSIGLVAEGSYPTVVTTPDGGRTMVLQAWQWGHVLGNVRVVFDSVGRVRNHTSAAVMPLG DRFMKDGVPISANSPEQQKIVEALRSSGIARIVGEDESTLAALAPFSAQLAAFRSQPVARALEDLTRSMNRGPGPLAADS MLAAVPEAQAALLNYGAVRRDLLAGIISAGDVLEVMPFGNTLVLVELTGAELKDALEEGIEFLQTKHGRNATALPHVAGM SFTVAPSAERGDRVGALSIRGSDGSYRPIEPSASYRTVVNSFLAGGGDGFSTLRNAGGHRNETGILDSDAFRDHLKKLGT VRNPDEQRIRVIGAPTTSINPRRPADNYVLPRLTAAAAFR
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=580, Percent_Identity=30.6896551724138, Blast_Score=208, Evalue=1e-53, Organism=Escherichia coli, GI1786687, Length=562, Percent_Identity=27.2241992882562, Blast_Score=133, Evalue=4e-32, Organism=Drosophila melanogaster, GI24641187, Length=567, Percent_Identity=29.4532627865961, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI221329836, Length=568, Percent_Identity=29.2253521126761, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI28573524, Length=564, Percent_Identity=28.0141843971631, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI19922446, Length=572, Percent_Identity=27.6223776223776, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24654424, Length=572, Percent_Identity=27.6223776223776, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI19922444, Length=560, Percent_Identity=27.3214285714286, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI19921980, Length=539, Percent_Identity=27.8293135435993, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24652512, Length=539, Percent_Identity=27.8293135435993, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI161076508, Length=541, Percent_Identity=27.7264325323475, Blast_Score=149, Evalue=7e-36,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 64356; Mature: 64225
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNRGIKSFGMTTWYMFLAGMLMLLHACGTITSTGYTLAIAHLNDTHSHLETAPVTLTID CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHCCCCEEEEEC GMATTVQLGGFPRLRTLVDEMRADNPNFLLLHAGDALQGTLYFTLFAGAVEFDFLNRLGI CCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHCCC DAMVFGNHEFDRGTGAIPGFLDRATFPLISANIDFSAEHTIVERVPRHIIREINGERVGI CEEEECCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE FGLTTETTPQSTLDVGKARFLDTVATARHQVAELEKQGVNKIIALTHLGYNADMLLAAAV EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEECC NGIDVIVGGHSHTLLGDRNRLNSIGLVAEGSYPTVVTTPDGGRTMVLQAWQWGHVLGNVR CCEEEEECCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECHHHHHCCCE VVFDSVGRVRNHTSAAVMPLGDRFMKDGVPISANSPEQQKIVEALRSSGIARIVGEDEST EEEHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCC LAALAPFSAQLAAFRSQPVARALEDLTRSMNRGPGPLAADSMLAAVPEAQAALLNYGAVR EEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH RDLLAGIISAGDVLEVMPFGNTLVLVELTGAELKDALEEGIEFLQTKHGRNATALPHVAG HHHHHHHHCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC MSFTVAPSAERGDRVGALSIRGSDGSYRPIEPSASYRTVVNSFLAGGGDGFSTLRNAGGH CEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCC RNETGILDSDAFRDHLKKLGTVRNPDEQRIRVIGAPTTSINPRRPADNYVLPRLTAAAAF CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC R C >Mature Secondary Structure GNRGIKSFGMTTWYMFLAGMLMLLHACGTITSTGYTLAIAHLNDTHSHLETAPVTLTID CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHCCCCEEEEEC GMATTVQLGGFPRLRTLVDEMRADNPNFLLLHAGDALQGTLYFTLFAGAVEFDFLNRLGI CCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHCCC DAMVFGNHEFDRGTGAIPGFLDRATFPLISANIDFSAEHTIVERVPRHIIREINGERVGI CEEEECCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE FGLTTETTPQSTLDVGKARFLDTVATARHQVAELEKQGVNKIIALTHLGYNADMLLAAAV EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEECC NGIDVIVGGHSHTLLGDRNRLNSIGLVAEGSYPTVVTTPDGGRTMVLQAWQWGHVLGNVR CCEEEEECCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECHHHHHCCCE VVFDSVGRVRNHTSAAVMPLGDRFMKDGVPISANSPEQQKIVEALRSSGIARIVGEDEST EEEHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCC LAALAPFSAQLAAFRSQPVARALEDLTRSMNRGPGPLAADSMLAAVPEAQAALLNYGAVR EEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH RDLLAGIISAGDVLEVMPFGNTLVLVELTGAELKDALEEGIEFLQTKHGRNATALPHVAG HHHHHHHHCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC MSFTVAPSAERGDRVGALSIRGSDGSYRPIEPSASYRTVVNSFLAGGGDGFSTLRNAGGH CEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCC RNETGILDSDAFRDHLKKLGTVRNPDEQRIRVIGAPTTSINPRRPADNYVLPRLTAAAAF CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]