| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581172
Identifier: 118581172
GI number: 118581172
Start: 3025877
End: 3026977
Strand: Reverse
Name: 118581172
Synonym: Ppro_2765
Alternate gene names: NA
Gene position: 3026977-3025877 (Counterclockwise)
Preceding gene: 118581173
Following gene: 118581171
Centisome position: 75.52
GC content: 59.22
Gene sequence:
>1101_bases ATGCATAAACGTATCGATAGTCCGCGGGTATGGATTCTGCTTGGTCAGAAAGGAGGCGACAACGCTCAGGTGCGCACCCT GGCCAATCTCCTCGGGTGGCCGTGCACTGAAAAACAACTCTGCTTCAACGGGCTTTCACGCCGTTTCAATATTCTGCTGG GAGCAAGTCTCGACAGTCTGACATGTGACTCAGCCCCCCTGGAGCCTCCCTGGCCCTCACTGGTCATCTCTATCGGCAAA CGGAGTGTCCCCGCTGCCCGGTGGATCAAGAGACGCTCGGGAGAGATAACCAGACTCGTTCATCTGGGACGCCCCTGGGC GCCCCTCTCATGGTTCGATCTGGTTGTCACGACCCCCCAGTATCGCCTGCCGAGCCGCCCCAACGTCATTCACAATACCC TCCCCGTCATCCGGCACGAACCGCAATGCCTCAGTAATGCGGGAATCGTCTGGGCTGAGCGGTTTCGGGCGTTGCCCCGC CCGTGGACCGCGTTTCTCGTCGGTGGCCCGAGTCGCCCCTTTACCTTAGATCAGCACACAGCGGCCTCCCTGGGAGAGGC GGTCAGTGCCCATGCCCGTCAGATGGGAGGGTCGCTGCTGGTCACCGCCAGCCGACGCTGCCCGCCGGCATCCTTTCGGG CACTGGCCGGTGAAATCCACTGCCCCGGCTATATCCACGACCCTTTCGACGCACATCAGGGAAACCCCTATCTTGCGTAT CTTGCCCTGGCTGACCGGTTTGTCGTCACCTGTGACAGCGCCTCCATGATTGCCGAGGCTTGCCTGACGGGTAAACCGGT TTCCATAATCGACCTGCCTGTTTCCCACGACAGGAAGATGCGACGGACAGAGTTTCTCCGATCCATACTGCTGAGGAAAC GGGGGGGAGTTGGGGAGTCCATCTACGAGTGCTTGGTGGACTTCGGGCTCATTACATCCACACGGGACCTGCGATATTTT GTCGATAACCTGAAGCAGAAGAGGCTCATTACCCGCTTAGGAGAGCCGGTTGAAGCTCAGGTTCCGCTCGTTTTTAATGA ACAGGACCTGGAACGGACCTGCGCCAGAATCAGGAGCCTCCTTGAGCCAAGGGAAAGCTGA
Upstream 100 bases:
>100_bases GACGGAATTTTGAACGCATAAGTGAACTGTCGAGCACCGTCAGAGACTGTCGGATTTGTCGTGCGCAACCGGAGCGGCAT GGACGGCGAGGTCCATTGTT
Downstream 100 bases:
>100_bases AGTGTCGCATGATTCGCACATTCTTCTGAGTATGTATTCTGGAAAAGTGTTTTCTTCCGTATTCCGTCGGTTCCTTATCC CGGTGCACCAACACTCTGCC
Product: nucleoside-diphosphate-sugar epimerase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MHKRIDSPRVWILLGQKGGDNAQVRTLANLLGWPCTEKQLCFNGLSRRFNILLGASLDSLTCDSAPLEPPWPSLVISIGK RSVPAARWIKRRSGEITRLVHLGRPWAPLSWFDLVVTTPQYRLPSRPNVIHNTLPVIRHEPQCLSNAGIVWAERFRALPR PWTAFLVGGPSRPFTLDQHTAASLGEAVSAHARQMGGSLLVTASRRCPPASFRALAGEIHCPGYIHDPFDAHQGNPYLAY LALADRFVVTCDSASMIAEACLTGKPVSIIDLPVSHDRKMRRTEFLRSILLRKRGGVGESIYECLVDFGLITSTRDLRYF VDNLKQKRLITRLGEPVEAQVPLVFNEQDLERTCARIRSLLEPRES
Sequences:
>Translated_366_residues MHKRIDSPRVWILLGQKGGDNAQVRTLANLLGWPCTEKQLCFNGLSRRFNILLGASLDSLTCDSAPLEPPWPSLVISIGK RSVPAARWIKRRSGEITRLVHLGRPWAPLSWFDLVVTTPQYRLPSRPNVIHNTLPVIRHEPQCLSNAGIVWAERFRALPR PWTAFLVGGPSRPFTLDQHTAASLGEAVSAHARQMGGSLLVTASRRCPPASFRALAGEIHCPGYIHDPFDAHQGNPYLAY LALADRFVVTCDSASMIAEACLTGKPVSIIDLPVSHDRKMRRTEFLRSILLRKRGGVGESIYECLVDFGLITSTRDLRYF VDNLKQKRLITRLGEPVEAQVPLVFNEQDLERTCARIRSLLEPRES >Mature_366_residues MHKRIDSPRVWILLGQKGGDNAQVRTLANLLGWPCTEKQLCFNGLSRRFNILLGASLDSLTCDSAPLEPPWPSLVISIGK RSVPAARWIKRRSGEITRLVHLGRPWAPLSWFDLVVTTPQYRLPSRPNVIHNTLPVIRHEPQCLSNAGIVWAERFRALPR PWTAFLVGGPSRPFTLDQHTAASLGEAVSAHARQMGGSLLVTASRRCPPASFRALAGEIHCPGYIHDPFDAHQGNPYLAY LALADRFVVTCDSASMIAEACLTGKPVSIIDLPVSHDRKMRRTEFLRSILLRKRGGVGESIYECLVDFGLITSTRDLRYF VDNLKQKRLITRLGEPVEAQVPLVFNEQDLERTCARIRSLLEPRES
Specific function: Unknown
COG id: COG3660
COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40932; Mature: 40932
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKRIDSPRVWILLGQKGGDNAQVRTLANLLGWPCTEKQLCFNGLSRRFNILLGASLDSL CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCC TCDSAPLEPPWPSLVISIGKRSVPAARWIKRRSGEITRLVHLGRPWAPLSWFDLVVTTPQ CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEHEECCCCCCCCCCEEEEEECCC YRLPSRPNVIHNTLPVIRHEPQCLSNAGIVWAERFRALPRPWTAFLVGGPSRPFTLDQHT CCCCCCCCHHHHCCHHHCCCCHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCEEECCHH AASLGEAVSAHARQMGGSLLVTASRRCPPASFRALAGEIHCPGYIHDPFDAHQGNPYLAY HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE LALADRFVVTCDSASMIAEACLTGKPVSIIDLPVSHDRKMRRTEFLRSILLRKRGGVGES EEECCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHH IYECLVDFGLITSTRDLRYFVDNLKQKRLITRLGEPVEAQVPLVFNEQDLERTCARIRSL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHH LEPRES HCCCCC >Mature Secondary Structure MHKRIDSPRVWILLGQKGGDNAQVRTLANLLGWPCTEKQLCFNGLSRRFNILLGASLDSL CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCC TCDSAPLEPPWPSLVISIGKRSVPAARWIKRRSGEITRLVHLGRPWAPLSWFDLVVTTPQ CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEHEECCCCCCCCCCEEEEEECCC YRLPSRPNVIHNTLPVIRHEPQCLSNAGIVWAERFRALPRPWTAFLVGGPSRPFTLDQHT CCCCCCCCHHHHCCHHHCCCCHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCEEECCHH AASLGEAVSAHARQMGGSLLVTASRRCPPASFRALAGEIHCPGYIHDPFDAHQGNPYLAY HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE LALADRFVVTCDSASMIAEACLTGKPVSIIDLPVSHDRKMRRTEFLRSILLRKRGGVGES EEECCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHH IYECLVDFGLITSTRDLRYFVDNLKQKRLITRLGEPVEAQVPLVFNEQDLERTCARIRSL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHH LEPRES HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA