| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581161
Identifier: 118581161
GI number: 118581161
Start: 3014586
End: 3015584
Strand: Direct
Name: 118581161
Synonym: Ppro_2754
Alternate gene names: NA
Gene position: 3014586-3015584 (Clockwise)
Preceding gene: 118581160
Following gene: 118581162
Centisome position: 75.21
GC content: 58.86
Gene sequence:
>999_bases ATGGCCACTCGCTACTTCCTCCCCCAAGACTGCCCGAACGGGATTCAGCAATTCCTGCGCCGCCGCATTCAAGGCATGCA CCCGGTGCCCGCCTTCCCCATCAACATCCAGATCCAGACCCAGTCGGGGTGCAATGCCCACTGCCGCTTCTGCCCCAACC ACAGCATCAGTAAAAAAGTCTCCATGGGGCGCATGGATGAGGATACGTTCTTCAAAATCATCGACGAGACGGTCAAGCAC CCGGTCAAGCGCATCAGCCCCTATCTGATGAACGAACCGCTGGCCGACCCGCGCCTGCCGGACCTGATCCGTTACATAGC CGACCGCAAACAGCCCATGACCCGCATCAAGATCAACACCAACGCCTCCTACCTGGACGAGGCCATGTCGGCGCGCCTGA TGGTGAGCGGCCTGGACCGCCTCCACGTGAGCTTTCACGGCATCCGCAGGGAAACCTATGAATCCAGCATGGGCAAAATG GACTGGGAAAAGAACCTGGCCAACGTAAACCGCTTCATCGAAATGCGAAAACGGTACAAGGGGAAGGCCCCTCGGCTCAA GATCACCATGGTTCATACCAAGGCAATCGACCGGGAACTGGACGAGATCCGCGAATACTGGAACTCCCGGGGGATCACGG TCAACATTCACGCCTTTGAGAATCGCTCCCATGGGGCAGTTGAAGAACGCGGCCTGAACGCCCTGCCCATGCGGGCACTC TCCGATTGCGACCGGCTCATGCAACAGGCCTACATCCTCTGGAACGGCGACTGCGTGCTCTGTTGCGTGGACTGGGAGCG CACGACGGTTCTGGGCAACGTCGCCCCGGCGGGCCTGCAAAGCGTCTGGCAGAACGAGAAGTATCTGAGTTTCCGCCGCA ACTACCTGGCACGGAATATCAAGGGGACCCTCTGCGAGGGGTGCATGGTACAGGACGAGACGGATTTTTCCTACAAGCCG AAACGCTCTCTGATTCAGAGACTCAAGGGCAAAGGATAG
Upstream 100 bases:
>100_bases CCGCGCCACCCGTCGCCGGGTCTCGAGGCACCCCTTAGTTACGCGCTGAAAATATTCACGCCGCACAGACAGGTTCACTA TCAAGAAAAGGATTTCCCAT
Downstream 100 bases:
>100_bases ACGAATCCGGCAACAGGCGACTCAGAACTCTTCAGGAAATCGGGCATCTCGGACAGCGCGGCTCACAGATAAAAGGGGGA CTCTCGGCATGGGTAGGAGC
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Radical Sam Domain Protein; Radical SAM Family Protein; Fe-S Oxidoreductase Containing Radical SAM Domain; Molybdopterin Cofactor Synthesis Protein A; Molybdenum Cofactor Biosynthesis Protein; Radical SAM Family Fe-S Oxidoreductase; Fe-S Oxidoreductase-Like Protein; Fe-S Oxidoreductase; Fe-S Oxidoreductase SAM Radical Superfamily; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MATRYFLPQDCPNGIQQFLRRRIQGMHPVPAFPINIQIQTQSGCNAHCRFCPNHSISKKVSMGRMDEDTFFKIIDETVKH PVKRISPYLMNEPLADPRLPDLIRYIADRKQPMTRIKINTNASYLDEAMSARLMVSGLDRLHVSFHGIRRETYESSMGKM DWEKNLANVNRFIEMRKRYKGKAPRLKITMVHTKAIDRELDEIREYWNSRGITVNIHAFENRSHGAVEERGLNALPMRAL SDCDRLMQQAYILWNGDCVLCCVDWERTTVLGNVAPAGLQSVWQNEKYLSFRRNYLARNIKGTLCEGCMVQDETDFSYKP KRSLIQRLKGKG
Sequences:
>Translated_332_residues MATRYFLPQDCPNGIQQFLRRRIQGMHPVPAFPINIQIQTQSGCNAHCRFCPNHSISKKVSMGRMDEDTFFKIIDETVKH PVKRISPYLMNEPLADPRLPDLIRYIADRKQPMTRIKINTNASYLDEAMSARLMVSGLDRLHVSFHGIRRETYESSMGKM DWEKNLANVNRFIEMRKRYKGKAPRLKITMVHTKAIDRELDEIREYWNSRGITVNIHAFENRSHGAVEERGLNALPMRAL SDCDRLMQQAYILWNGDCVLCCVDWERTTVLGNVAPAGLQSVWQNEKYLSFRRNYLARNIKGTLCEGCMVQDETDFSYKP KRSLIQRLKGKG >Mature_331_residues ATRYFLPQDCPNGIQQFLRRRIQGMHPVPAFPINIQIQTQSGCNAHCRFCPNHSISKKVSMGRMDEDTFFKIIDETVKHP VKRISPYLMNEPLADPRLPDLIRYIADRKQPMTRIKINTNASYLDEAMSARLMVSGLDRLHVSFHGIRRETYESSMGKMD WEKNLANVNRFIEMRKRYKGKAPRLKITMVHTKAIDRELDEIREYWNSRGITVNIHAFENRSHGAVEERGLNALPMRALS DCDRLMQQAYILWNGDCVLCCVDWERTTVLGNVAPAGLQSVWQNEKYLSFRRNYLARNIKGTLCEGCMVQDETDFSYKPK RSLIQRLKGKG
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38561; Mature: 38430
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRYFLPQDCPNGIQQFLRRRIQGMHPVPAFPINIQIQTQSGCNAHCRFCPNHSISKKV CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCHHHH SMGRMDEDTFFKIIDETVKHPVKRISPYLMNEPLADPRLPDLIRYIADRKQPMTRIKINT HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEC NASYLDEAMSARLMVSGLDRLHVSFHGIRRETYESSMGKMDWEKNLANVNRFIEMRKRYK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GKAPRLKITMVHTKAIDRELDEIREYWNSRGITVNIHAFENRSHGAVEERGLNALPMRAL CCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHH SDCDRLMQQAYILWNGDCVLCCVDWERTTVLGNVAPAGLQSVWQNEKYLSFRRNYLARNI HHHHHHHHHEEEEECCCEEEEEECCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCC KGTLCEGCMVQDETDFSYKPKRSLIQRLKGKG CCHHHCCCEEECCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure ATRYFLPQDCPNGIQQFLRRRIQGMHPVPAFPINIQIQTQSGCNAHCRFCPNHSISKKV CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCHHHH SMGRMDEDTFFKIIDETVKHPVKRISPYLMNEPLADPRLPDLIRYIADRKQPMTRIKINT HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEC NASYLDEAMSARLMVSGLDRLHVSFHGIRRETYESSMGKMDWEKNLANVNRFIEMRKRYK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GKAPRLKITMVHTKAIDRELDEIREYWNSRGITVNIHAFENRSHGAVEERGLNALPMRAL CCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHH SDCDRLMQQAYILWNGDCVLCCVDWERTTVLGNVAPAGLQSVWQNEKYLSFRRNYLARNI HHHHHHHHHEEEEECCCEEEEEECCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCC KGTLCEGCMVQDETDFSYKPKRSLIQRLKGKG CCHHHCCCEEECCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA