Click here to switch to the map view.

The map label for this gene is wcaL [C]

Identifier: 118581159

GI number: 118581159

Start: 3012129

End: 3013334

Strand: Direct

Name: wcaL [C]

Synonym: Ppro_2752

Alternate gene names: 118581159

Gene position: 3012129-3013334 (Clockwise)

Preceding gene: 118581158

Following gene: 118581160

Centisome position: 75.15

GC content: 63.85

Gene sequence:

>1206_bases
ATGAGCACTAAGAACAAAGGCTCCATCCATCCCGACAGCATCATCTCTGACAACAAACCGCTAAAAATCCTGATGGTTGA
CTCCCATGGCTCCGTCCAGCGGGGTGGAGCGGTACAGTGCGCTTCCCTGGCCCAGGCCCTGGCCCGGCGCGGACACCGGC
TAACCTGCGTATTCGACGGCAGACCGGACCAGCCCCTGGAGGGGCTCTGGTTCGACAACCTGCGGAGTGCGGGCGTACAG
ATCCTGCGTCTGGGCCTGGATAGCCCCGCCGACATGCTGCAATTTCGCCGTTTGCTGGCAACGGAACGGCCCGATATTCT
CCATACCCACAAGAATCGCGCGCTCTTTTTCGCCTACTTCGCCACCCTGGGAATGCGCCGTCCCGTCTGGACGGCAAACC
GCGGCACCGTTTACCCCCTGTCCCTGAGTCGGCTGGCCCATTTCATCCACCGCCGCCATGTGGCGCGCATGTTCGCCGTG
GCTCAGGCGGTCAAGGACGCCCTTGTGGATGATGGAATCCCATCGAAAAAGGTTGATGTGATCTACGGCAGCTTCGATCC
GGAGCGTTTTTCCCCCGCCGTCTCTGGCCAGGCCATGCGCAACGCATGGCAGGTACCGTTCGGGACTCCACTCGTGGGGC
TGATCGGCTCCCTGAACACCCCCAAGAAGGGACATCAGCTGCTGCTGGAAGCGGCGACCATCCTCAGGGGCAAATGCCGC
GACTTGCGCTTCGTCCTGGTGGGTGAAGGCGATCCGAGCCCCCTTGAGGCTAAGGCTTCCTCCCTAGGAGTGTCCGACCG
GGTCATCTTCGCCGGCTTCACCGAGGACGTACCGGCCGCGCTGGCTGCCCTGGACATCGTCGTCTGCGCATCCCTGCGTG
GCGAGGGACTGACCGGCGCGGTTCGAGAGGCTCTGGCCATGGCCCGCCCGGTGATTTCAAGCGATGTTGCCGGCAATCGG
GAACTGGTCCGACACGGGCAGACCGGACTGTTGGTACCGCCCGGAGATCCGGTGGCCCTGGCCGCGGCCATCTGTCGGTT
GCTGGATGACCGCGGATTTGCCCAGGAGTGCGCCGTGCGTGGCAGGGAACTGGTACTGGAACTGTGCACCGAGGAGCGGC
GTGCGGAGCAGGTGGAGCGGGCCTATTGCGAGTTGCTGACAGCGGCTGGGGCTACCCCCAGCATGGTGGAGCGAACTAAG
GCATGA

Upstream 100 bases:

>100_bases
CCAATCATGAACTACTGGTGGCATCATCCGACCTTTACCTCTATGATGCCTTTCACACTAGGTGGGAGAAGATGATTAAC
GAAACAGAGGCTATGCCGTC

Downstream 100 bases:

>100_bases
ATTTCACGCGTGGCGTATTCCCTTCCTGTCCACGAGTCTGGGTCCTGACTAACCCGCATCCCGGCAACCGCATCCAGGCC
ATCGCCCTGGCCGAGGCCCT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSTKNKGSIHPDSIISDNKPLKILMVDSHGSVQRGGAVQCASLAQALARRGHRLTCVFDGRPDQPLEGLWFDNLRSAGVQ
ILRLGLDSPADMLQFRRLLATERPDILHTHKNRALFFAYFATLGMRRPVWTANRGTVYPLSLSRLAHFIHRRHVARMFAV
AQAVKDALVDDGIPSKKVDVIYGSFDPERFSPAVSGQAMRNAWQVPFGTPLVGLIGSLNTPKKGHQLLLEAATILRGKCR
DLRFVLVGEGDPSPLEAKASSLGVSDRVIFAGFTEDVPAALAALDIVVCASLRGEGLTGAVREALAMARPVISSDVAGNR
ELVRHGQTGLLVPPGDPVALAAAICRLLDDRGFAQECAVRGRELVLELCTEERRAEQVERAYCELLTAAGATPSMVERTK
A

Sequences:

>Translated_401_residues
MSTKNKGSIHPDSIISDNKPLKILMVDSHGSVQRGGAVQCASLAQALARRGHRLTCVFDGRPDQPLEGLWFDNLRSAGVQ
ILRLGLDSPADMLQFRRLLATERPDILHTHKNRALFFAYFATLGMRRPVWTANRGTVYPLSLSRLAHFIHRRHVARMFAV
AQAVKDALVDDGIPSKKVDVIYGSFDPERFSPAVSGQAMRNAWQVPFGTPLVGLIGSLNTPKKGHQLLLEAATILRGKCR
DLRFVLVGEGDPSPLEAKASSLGVSDRVIFAGFTEDVPAALAALDIVVCASLRGEGLTGAVREALAMARPVISSDVAGNR
ELVRHGQTGLLVPPGDPVALAAAICRLLDDRGFAQECAVRGRELVLELCTEERRAEQVERAYCELLTAAGATPSMVERTK
A
>Mature_400_residues
STKNKGSIHPDSIISDNKPLKILMVDSHGSVQRGGAVQCASLAQALARRGHRLTCVFDGRPDQPLEGLWFDNLRSAGVQI
LRLGLDSPADMLQFRRLLATERPDILHTHKNRALFFAYFATLGMRRPVWTANRGTVYPLSLSRLAHFIHRRHVARMFAVA
QAVKDALVDDGIPSKKVDVIYGSFDPERFSPAVSGQAMRNAWQVPFGTPLVGLIGSLNTPKKGHQLLLEAATILRGKCRD
LRFVLVGEGDPSPLEAKASSLGVSDRVIFAGFTEDVPAALAALDIVVCASLRGEGLTGAVREALAMARPVISSDVAGNRE
LVRHGQTGLLVPPGDPVALAAAICRLLDDRGFAQECAVRGRELVLELCTEERRAEQVERAYCELLTAAGATPSMVERTKA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43448; Mature: 43317

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKNKGSIHPDSIISDNKPLKILMVDSHGSVQRGGAVQCASLAQALARRGHRLTCVFDG
CCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECC
RPDQPLEGLWFDNLRSAGVQILRLGLDSPADMLQFRRLLATERPDILHTHKNRALFFAYF
CCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH
ATLGMRRPVWTANRGTVYPLSLSRLAHFIHRRHVARMFAVAQAVKDALVDDGIPSKKVDV
HHHCCCCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IYGSFDPERFSPAVSGQAMRNAWQVPFGTPLVGLIGSLNTPKKGHQLLLEAATILRGKCR
EECCCCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
DLRFVLVGEGDPSPLEAKASSLGVSDRVIFAGFTEDVPAALAALDIVVCASLRGEGLTGA
CEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHH
VREALAMARPVISSDVAGNRELVRHGQTGLLVPPGDPVALAAAICRLLDDRGFAQECAVR
HHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH
GRELVLELCTEERRAEQVERAYCELLTAAGATPSMVERTKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure 
STKNKGSIHPDSIISDNKPLKILMVDSHGSVQRGGAVQCASLAQALARRGHRLTCVFDG
CCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECC
RPDQPLEGLWFDNLRSAGVQILRLGLDSPADMLQFRRLLATERPDILHTHKNRALFFAYF
CCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH
ATLGMRRPVWTANRGTVYPLSLSRLAHFIHRRHVARMFAVAQAVKDALVDDGIPSKKVDV
HHHCCCCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IYGSFDPERFSPAVSGQAMRNAWQVPFGTPLVGLIGSLNTPKKGHQLLLEAATILRGKCR
EECCCCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
DLRFVLVGEGDPSPLEAKASSLGVSDRVIFAGFTEDVPAALAALDIVVCASLRGEGLTGA
CEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHH
VREALAMARPVISSDVAGNRELVRHGQTGLLVPPGDPVALAAAICRLLDDRGFAQECAVR
HHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH
GRELVLELCTEERRAEQVERAYCELLTAAGATPSMVERTKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]