| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581099
Identifier: 118581099
GI number: 118581099
Start: 2926957
End: 2929629
Strand: Direct
Name: 118581099
Synonym: Ppro_2689
Alternate gene names: NA
Gene position: 2926957-2929629 (Clockwise)
Preceding gene: 118581097
Following gene: 118581116
Centisome position: 73.03
GC content: 60.91
Gene sequence:
>2673_bases ATGATTAAAAACAGGTTCATTCTCATCCTGGTTATTGTCGCCCTGACCGTCTCCCTGCTCTCATTCCTACTGGCTTTCTG CACCGACTGGCTCTTCTTCGTCGAGACCGGCTTCACATCCGTATTCACGACAAAGCTGTACGCCCAGGCAGGCAGCGGGC TGCTATTCGCCGGTGTGCTGTTCGCCGGTACGCTGCTCAACCTGCTCCTGGCGGGAAAAGCGGTTTTTCCCACATATGCA ACGCCCAGGGAGGCGGGCGACTTCAGGCCACGGCTCGATGAAGCCCGGCGCCTTGTCAAGCCGTTGGGGATTCCGGCCTG CGCCATCCTGGCCCTGCTCGTCGGCCAGTGGGGCGCCATGCAGTGGGAGAAGCTGCTGTTCTTCGTCAACCGGGTCAGCG TCGGAACCACCGACCCGGTCATGGGTAGGGATATCGGCTTCTACCTGTTCACCCTCCCGCTCATGGAGACGATCACGGCA TTCGCCGGCTTCACGCTGCTGACCTCGCTGTTCCTGACGGTCCTGGTCTACACTGTCCGCGGCGGCATCTGTCTGTCGGA ACGGGGAGTGGCGATTGACGGTACGGTTCGCCGCCATCTGGCGATCCTGCTGCTGCTCCTGTCCTGCGTGATCGCCGCCG GCTTCCACCTGGATTGCTTCAGGCTGCTGTTTTCCAGCAACGGCATCTTCCACGGCGCGGGATACACGGACGTCCACTCC CGGCTGCCCACCTACAGGATCCTGACCATCCTGGCCCCACTGGCGGGAACCGCCCTTGCAATCGGGCTCTGGAAGGGGGC CTGGCGCATGGCCCTGCTGGCGCCACTGGCGGTAATCGTACTGCACGTCATCGGCATCCGGGTCTATCCGGGACTGTTGC AAAAATTCAAGGTAGCCCCCAACGAACTAGCCCTGGAAGCTCCTTACATCAGGAACAACATCGCCCTCACCCGCCTGGGC TTTGATCTTGACAAGATCGAAACCATCCCCTTCGATGTGGACACGCAACTGTCCAGCGCCGACATAGCCAGAAATGACGC CACCATCAAGAATATCCGTCTCTGGGACCATGCCCCGCTGCTCAAGACCTACAGCCAACTGCAGCAGATCAGGACCTATT ACCGCTTCTTCGATGTGGACAATGACCGCTACCTGGTCAACGGCCGCTACAGCCAGGTCATGCTCTCCCCCCGCGAACTC TCCTACGCCGACCTGCCCAGCAGGAATTGGATCAACGAGCGCCTGATCTTCACCCACGGCAACGGCATCACCTTTGGCCC GGTCAGCCGGATCAGCAAGGAAGGACTGCCCGAATTCTTCGTCAAGGACATCCCCGCCGTGAGTCTGGCCGACATACGGG TAACCCGGCCGGAGATCTACTTCGGCGAACTGTCCAATGAATACGTGATCGTCAGGACCAGGGTGCCGGAATTCAGCTAT CCGACCTCCTCCGGGAACATCAACACCACCTATGCCGGCACGGGTGGAGTCCCCATGGACTCCCTGGCCAAGAGGATGCT GTTTGCCGCCAGGTTCAGGACGGAGAAGATCCTGCTCTCCTCCGACATCACCAGCCAGAGCAGCATCATCTTCAACCGCA ACATCAATGAACGGGTCAGGGCGGTGGCCCCCTTCCTGCATTTCGACGACGATCCCTACATGGTGGTGGACGACAGGGGC AGGCTCAAGTGGATCATCGATGCCTACACCTTCTCGGACCGGCTCCCCTGCTCAAAGCCGATCAAGGGGGGCGTCAACTA CATGAGGAACTCCGTCAAGGCGGTTGTGGACGCCTATGACGGCACGCTCGCGTTCTACATCAGCGACCCCCATGACGTCC TGATCCGGGTCTATGACCGGATGTTTCCGGGGCTTTTCAGACCGATCTCGGCCATGCCGGACGACCTGCGCAGGCATGTG CGCTACCCGCACCATTTCCTCCAGCTCCAGGCGGCCATGTACACCGCCTACCACATGACCGACCCAAAGGTCTTCTACAA CAAGGAGAATCTGTGGCAGGTTCCCGCCCTGGGCGAAAAACCGATGGAACCCTACTACACGATCATGAAGCTGCCGGGGG AAACGGCCGAGGAGTACATCCTGCTGCTCCCCTTTACCCCGTCCAAACGGGACAACCTGGCTGCCTGGCTCACTGCGCGC AGTGACGGGGCCAATTACGGCAAGATCCGGGCCTACACCTTCCCCCGCGACCGCCTGATCTACGGACCGAAACAGATCGA CGCCCGCATCAACCAGGACTCATTCATATCCCAGCAGCTGACCCTCTGGAACCAGCGCGGCTCGGAGGTCATCCGGGGGA GCCTGCTGGTCATCCCGATCGAGAAGTCGCTGCTCTACGTTCAGCCATTGTTTCTGGCAGCCGACAAAGCCGGCCTGCCC GAACTGAAGCGGGTGATCGTCGCCTTCGGGGACCAGGTAGTCATGGAGGAGAATCTGGAACAGGCCCTGCAACGGCTCTT CGGCGGCAAACGGGCGCCCGAGCCCGCCAGCAGCGCCACCGCAAAGGATTCAACGACTTCTCCGGCCTTGCTGGCCAAAG AGGCCATGGCCGCCTATGAGAAGGCGATCAGCCAGCAGCGCCAGGGCAACTGGAGCGGCTACGGCGAGGAGCTGCGCAGA CTGGAGCAAATCCTGAGGCGCATGGCGCAGTAA
Upstream 100 bases:
>100_bases CAGACCATGAGAATACTTTGATTTCAAGCCCAAAAGGTGGCACTCTCTCTGGGAACGGGGCAGGACATCACGTGAAACCG ACAAAATGGAGGCATAGCGC
Downstream 100 bases:
>100_bases CGCGAGACGATATCAGACCGGGGTTCAACCCGGTTCCGGAGCGACCAGTTCCCCGTTCCGCAAACAGGACGATCTGGGCA CCCACCTGGAATCGGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 890; Mature: 890
Protein sequence:
>890_residues MIKNRFILILVIVALTVSLLSFLLAFCTDWLFFVETGFTSVFTTKLYAQAGSGLLFAGVLFAGTLLNLLLAGKAVFPTYA TPREAGDFRPRLDEARRLVKPLGIPACAILALLVGQWGAMQWEKLLFFVNRVSVGTTDPVMGRDIGFYLFTLPLMETITA FAGFTLLTSLFLTVLVYTVRGGICLSERGVAIDGTVRRHLAILLLLLSCVIAAGFHLDCFRLLFSSNGIFHGAGYTDVHS RLPTYRILTILAPLAGTALAIGLWKGAWRMALLAPLAVIVLHVIGIRVYPGLLQKFKVAPNELALEAPYIRNNIALTRLG FDLDKIETIPFDVDTQLSSADIARNDATIKNIRLWDHAPLLKTYSQLQQIRTYYRFFDVDNDRYLVNGRYSQVMLSPREL SYADLPSRNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIRVTRPEIYFGELSNEYVIVRTRVPEFSY PTSSGNINTTYAGTGGVPMDSLAKRMLFAARFRTEKILLSSDITSQSSIIFNRNINERVRAVAPFLHFDDDPYMVVDDRG RLKWIIDAYTFSDRLPCSKPIKGGVNYMRNSVKAVVDAYDGTLAFYISDPHDVLIRVYDRMFPGLFRPISAMPDDLRRHV RYPHHFLQLQAAMYTAYHMTDPKVFYNKENLWQVPALGEKPMEPYYTIMKLPGETAEEYILLLPFTPSKRDNLAAWLTAR SDGANYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWNQRGSEVIRGSLLVIPIEKSLLYVQPLFLAADKAGLP ELKRVIVAFGDQVVMEENLEQALQRLFGGKRAPEPASSATAKDSTTSPALLAKEAMAAYEKAISQQRQGNWSGYGEELRR LEQILRRMAQ
Sequences:
>Translated_890_residues MIKNRFILILVIVALTVSLLSFLLAFCTDWLFFVETGFTSVFTTKLYAQAGSGLLFAGVLFAGTLLNLLLAGKAVFPTYA TPREAGDFRPRLDEARRLVKPLGIPACAILALLVGQWGAMQWEKLLFFVNRVSVGTTDPVMGRDIGFYLFTLPLMETITA FAGFTLLTSLFLTVLVYTVRGGICLSERGVAIDGTVRRHLAILLLLLSCVIAAGFHLDCFRLLFSSNGIFHGAGYTDVHS RLPTYRILTILAPLAGTALAIGLWKGAWRMALLAPLAVIVLHVIGIRVYPGLLQKFKVAPNELALEAPYIRNNIALTRLG FDLDKIETIPFDVDTQLSSADIARNDATIKNIRLWDHAPLLKTYSQLQQIRTYYRFFDVDNDRYLVNGRYSQVMLSPREL SYADLPSRNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIRVTRPEIYFGELSNEYVIVRTRVPEFSY PTSSGNINTTYAGTGGVPMDSLAKRMLFAARFRTEKILLSSDITSQSSIIFNRNINERVRAVAPFLHFDDDPYMVVDDRG RLKWIIDAYTFSDRLPCSKPIKGGVNYMRNSVKAVVDAYDGTLAFYISDPHDVLIRVYDRMFPGLFRPISAMPDDLRRHV RYPHHFLQLQAAMYTAYHMTDPKVFYNKENLWQVPALGEKPMEPYYTIMKLPGETAEEYILLLPFTPSKRDNLAAWLTAR SDGANYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWNQRGSEVIRGSLLVIPIEKSLLYVQPLFLAADKAGLP ELKRVIVAFGDQVVMEENLEQALQRLFGGKRAPEPASSATAKDSTTSPALLAKEAMAAYEKAISQQRQGNWSGYGEELRR LEQILRRMAQ >Mature_890_residues MIKNRFILILVIVALTVSLLSFLLAFCTDWLFFVETGFTSVFTTKLYAQAGSGLLFAGVLFAGTLLNLLLAGKAVFPTYA TPREAGDFRPRLDEARRLVKPLGIPACAILALLVGQWGAMQWEKLLFFVNRVSVGTTDPVMGRDIGFYLFTLPLMETITA FAGFTLLTSLFLTVLVYTVRGGICLSERGVAIDGTVRRHLAILLLLLSCVIAAGFHLDCFRLLFSSNGIFHGAGYTDVHS RLPTYRILTILAPLAGTALAIGLWKGAWRMALLAPLAVIVLHVIGIRVYPGLLQKFKVAPNELALEAPYIRNNIALTRLG FDLDKIETIPFDVDTQLSSADIARNDATIKNIRLWDHAPLLKTYSQLQQIRTYYRFFDVDNDRYLVNGRYSQVMLSPREL SYADLPSRNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIRVTRPEIYFGELSNEYVIVRTRVPEFSY PTSSGNINTTYAGTGGVPMDSLAKRMLFAARFRTEKILLSSDITSQSSIIFNRNINERVRAVAPFLHFDDDPYMVVDDRG RLKWIIDAYTFSDRLPCSKPIKGGVNYMRNSVKAVVDAYDGTLAFYISDPHDVLIRVYDRMFPGLFRPISAMPDDLRRHV RYPHHFLQLQAAMYTAYHMTDPKVFYNKENLWQVPALGEKPMEPYYTIMKLPGETAEEYILLLPFTPSKRDNLAAWLTAR SDGANYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWNQRGSEVIRGSLLVIPIEKSLLYVQPLFLAADKAGLP ELKRVIVAFGDQVVMEENLEQALQRLFGGKRAPEPASSATAKDSTTSPALLAKEAMAAYEKAISQQRQGNWSGYGEELRR LEQILRRMAQ
Specific function: Unknown
COG id: COG1615
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0182 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2689_PELPD (A1ASH1)
Other databases:
- EMBL: CP000482 - RefSeq: YP_902349.1 - GeneID: 4573813 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_2689 - eggNOG: COG1615 - HOGENOM: HBG538831 - OMA: NQTDWIN - ProtClustDB: CLSK828803 - HAMAP: MF_01600 - InterPro: IPR005372
Pfam domain/function: PF03699 UPF0182
EC number: NA
Molecular weight: Translated: 100161; Mature: 100161
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x24d7c310)-; HASH(0x2692d194)-; HASH(0x2673f988)-; HASH(0x2692b6b0)-; HASH(0x26621b20)-; HASH(0x2655c200)-; HASH(0x24c78c64)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNRFILILVIVALTVSLLSFLLAFCTDWLFFVETGFTSVFTTKLYAQAGSGLLFAGVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH FAGTLLNLLLAGKAVFPTYATPREAGDFRPRLDEARRLVKPLGIPACAILALLVGQWGAM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCH QWEKLLFFVNRVSVGTTDPVMGRDIGFYLFTLPLMETITAFAGFTLLTSLFLTVLVYTVR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGICLSERGVAIDGTVRRHLAILLLLLSCVIAAGFHLDCFRLLFSSNGIFHGAGYTDVHS CCEEECCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHH RLPTYRILTILAPLAGTALAIGLWKGAWRMALLAPLAVIVLHVIGIRVYPGLLQKFKVAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NELALEAPYIRNNIALTRLGFDLDKIETIPFDVDTQLSSADIARNDATIKNIRLWDHAPL CHHEEECCCHHCCEEEEEECCCHHHHEECCCCCCCCCCCCHHCCCCCCEEEEEECCCCHH LKTYSQLQQIRTYYRFFDVDNDRYLVNGRYSQVMLSPRELSYADLPSRNWINERLIFTHG HHHHHHHHHHHHHHHHEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECC NGITFGPVSRISKEGLPEFFVKDIPAVSLADIRVTRPEIYFGELSNEYVIVRTRVPEFSY CCCEECCHHHHHHCCCHHHHHHCCCCCEEEEEEEECCEEEEECCCCCEEEEEEECCCCCC PTSSGNINTTYAGTGGVPMDSLAKRMLFAARFRTEKILLSSDITSQSSIIFNRNINERVR CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCHHHHHH AVAPFLHFDDDPYMVVDDRGRLKWIIDAYTFSDRLPCSKPIKGGVNYMRNSVKAVVDAYD HHHHHHEECCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GTLAFYISDPHDVLIRVYDRMFPGLFRPISAMPDDLRRHVRYPHHFLQLQAAMYTAYHMT CEEEEEECCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC DPKVFYNKENLWQVPALGEKPMEPYYTIMKLPGETAEEYILLLPFTPSKRDNLAAWLTAR CCCEEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEC SDGANYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWNQRGSEVIRGSLLVIPI CCCCCCCEEEEEECCCCCEEECCHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEE EKSLLYVQPLFLAADKAGLPELKRVIVAFGDQVVMEENLEQALQRLFGGKRAPEPASSAT CCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AKDSTTSPALLAKEAMAAYEKAISQQRQGNWSGYGEELRRLEQILRRMAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCH >Mature Secondary Structure MIKNRFILILVIVALTVSLLSFLLAFCTDWLFFVETGFTSVFTTKLYAQAGSGLLFAGVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH FAGTLLNLLLAGKAVFPTYATPREAGDFRPRLDEARRLVKPLGIPACAILALLVGQWGAM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCH QWEKLLFFVNRVSVGTTDPVMGRDIGFYLFTLPLMETITAFAGFTLLTSLFLTVLVYTVR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGICLSERGVAIDGTVRRHLAILLLLLSCVIAAGFHLDCFRLLFSSNGIFHGAGYTDVHS CCEEECCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHH RLPTYRILTILAPLAGTALAIGLWKGAWRMALLAPLAVIVLHVIGIRVYPGLLQKFKVAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NELALEAPYIRNNIALTRLGFDLDKIETIPFDVDTQLSSADIARNDATIKNIRLWDHAPL CHHEEECCCHHCCEEEEEECCCHHHHEECCCCCCCCCCCCHHCCCCCCEEEEEECCCCHH LKTYSQLQQIRTYYRFFDVDNDRYLVNGRYSQVMLSPRELSYADLPSRNWINERLIFTHG HHHHHHHHHHHHHHHHEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECC NGITFGPVSRISKEGLPEFFVKDIPAVSLADIRVTRPEIYFGELSNEYVIVRTRVPEFSY CCCEECCHHHHHHCCCHHHHHHCCCCCEEEEEEEECCEEEEECCCCCEEEEEEECCCCCC PTSSGNINTTYAGTGGVPMDSLAKRMLFAARFRTEKILLSSDITSQSSIIFNRNINERVR CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCHHHHHH AVAPFLHFDDDPYMVVDDRGRLKWIIDAYTFSDRLPCSKPIKGGVNYMRNSVKAVVDAYD HHHHHHEECCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GTLAFYISDPHDVLIRVYDRMFPGLFRPISAMPDDLRRHVRYPHHFLQLQAAMYTAYHMT CEEEEEECCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC DPKVFYNKENLWQVPALGEKPMEPYYTIMKLPGETAEEYILLLPFTPSKRDNLAAWLTAR CCCEEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEC SDGANYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWNQRGSEVIRGSLLVIPI CCCCCCCEEEEEECCCCCEEECCHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEE EKSLLYVQPLFLAADKAGLPELKRVIVAFGDQVVMEENLEQALQRLFGGKRAPEPASSAT CCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AKDSTTSPALLAKEAMAAYEKAISQQRQGNWSGYGEELRRLEQILRRMAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA