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The map label for this gene is psd [H]

Identifier: 118581096

GI number: 118581096

Start: 2923248

End: 2924237

Strand: Direct

Name: psd [H]

Synonym: Ppro_2685

Alternate gene names: 118581096

Gene position: 2923248-2924237 (Clockwise)

Preceding gene: 118581095

Following gene: 118581097

Centisome position: 72.94

GC content: 61.21

Gene sequence:

>990_bases
ATGCAGCACCAGTACATCGAGCGGGATAGCGGCCAGATCGTCACGGAACGACTCCTGGCCGACGACATGATCAGGCTGCT
CTACCACGGTGTGCGGGAGAACAGCGGCCGCCTCTTCGATCTGCTGATCAGCAGCCGTGCCTCACAGATCCTGGGAATGA
TCCAGTTCGACCGTCCGGTCCTGTCCCCCCGGACCTTGGCGGCCCGCTATGGCATCGATACCGATGAATTGCTGGAGCCT
GCGGAGAAGCTTAATACCCTGCGCAAGCTGTTCGAACGCAGGATCAGATACGAAGCGTGCCGTCCCATGCCGGATGAGCG
GGGAGCCGTCGTTTCGCCGGCCGACGCAAGGATCGTGATCGGCTCCCTGCGAGAAACGTCGCTGATCTTCCTCAAGGACA
AGTTCTTTGGCTACGAGGAACTACTGGGGAGACAGAAAACGGATTGGGTCGGCGGATTCGAGAACGGCGATTTCGCGGTC
TTCCGCCTGACCCCTGACAAGTACCACTACAACCACGCCCCCGTAGCGGGACGGGTGCTGGATTTCTACACCATCGACGG
CGACTACCACTCCTGCAACCCCTCGGCCGTGGTCTGCATGGCCACCCCTTTTTCAAAGAACCGCAGGGTGGTGACCATCA
TCGACACGGATGTTCCCAACGGCACCAGCACGGGGCTGGTGGCAATGGTTGAAGTCGTGGCGCTGATGATCGGCGACATC
GTTCAGGCCTACAGCAGCAGGGGGTATGAGTCGCCCCATTCCATGGAAATCGGCATGTTCGTCGAGAAGGGGCAGCCCAA
GAGCCTCTACCGGCCGGGGAGCAGCACCGATATCCTGCTGTTCCAGCCGGGACGGATCAGGTTCTGCGAGGACCTGCTGT
CGAACATGCGCCGCAGCGGGGTGTCGAGCCGCTTCAGCAGGGGCTTCGGGGCGCCGCTGGTGGAGACCGATATCAGGGTC
AGGTCTTTGATCGGCCAGGCGGTGAATTGA

Upstream 100 bases:

>100_bases
ACCGCCACGCTCATCCAGGCCATGAATCTGCTGCTGTTAAGCGTATTTCACGACGAGCGGCGCTTCGCCGCCCATACCAC
CACAAGGAGCGACTCCATCA

Downstream 100 bases:

>100_bases
TGCTGAATTCATCAGTAGGGAACTACCTGCGTTCGCGCGGACGGGCTCTCTTCGATAGTCCCCGACTGCCGTTTCCTGGA
TGACACGAAAAGGGAGCGCG

Product: phosphatidylserine decarboxylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MQHQYIERDSGQIVTERLLADDMIRLLYHGVRENSGRLFDLLISSRASQILGMIQFDRPVLSPRTLAARYGIDTDELLEP
AEKLNTLRKLFERRIRYEACRPMPDERGAVVSPADARIVIGSLRETSLIFLKDKFFGYEELLGRQKTDWVGGFENGDFAV
FRLTPDKYHYNHAPVAGRVLDFYTIDGDYHSCNPSAVVCMATPFSKNRRVVTIIDTDVPNGTSTGLVAMVEVVALMIGDI
VQAYSSRGYESPHSMEIGMFVEKGQPKSLYRPGSSTDILLFQPGRIRFCEDLLSNMRRSGVSSRFSRGFGAPLVETDIRV
RSLIGQAVN

Sequences:

>Translated_329_residues
MQHQYIERDSGQIVTERLLADDMIRLLYHGVRENSGRLFDLLISSRASQILGMIQFDRPVLSPRTLAARYGIDTDELLEP
AEKLNTLRKLFERRIRYEACRPMPDERGAVVSPADARIVIGSLRETSLIFLKDKFFGYEELLGRQKTDWVGGFENGDFAV
FRLTPDKYHYNHAPVAGRVLDFYTIDGDYHSCNPSAVVCMATPFSKNRRVVTIIDTDVPNGTSTGLVAMVEVVALMIGDI
VQAYSSRGYESPHSMEIGMFVEKGQPKSLYRPGSSTDILLFQPGRIRFCEDLLSNMRRSGVSSRFSRGFGAPLVETDIRV
RSLIGQAVN
>Mature_329_residues
MQHQYIERDSGQIVTERLLADDMIRLLYHGVRENSGRLFDLLISSRASQILGMIQFDRPVLSPRTLAARYGIDTDELLEP
AEKLNTLRKLFERRIRYEACRPMPDERGAVVSPADARIVIGSLRETSLIFLKDKFFGYEELLGRQKTDWVGGFENGDFAV
FRLTPDKYHYNHAPVAGRVLDFYTIDGDYHSCNPSAVVCMATPFSKNRRVVTIIDTDVPNGTSTGLVAMVEVVALMIGDI
VQAYSSRGYESPHSMEIGMFVEKGQPKSLYRPGSSTDILLFQPGRIRFCEDLLSNMRRSGVSSRFSRGFGAPLVETDIRV
RSLIGQAVN

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790604, Length=238, Percent_Identity=27.3109243697479, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321609, Length=293, Percent_Identity=24.9146757679181, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 37041; Mature: 37041

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHQYIERDSGQIVTERLLADDMIRLLYHGVRENSGRLFDLLISSRASQILGMIQFDRPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCC
LSPRTLAARYGIDTDELLEPAEKLNTLRKLFERRIRYEACRPMPDERGAVVSPADARIVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEE
GSLRETSLIFLKDKFFGYEELLGRQKTDWVGGFENGDFAVFRLTPDKYHYNHAPVAGRVL
ECCCCCEEEEEEHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE
DFYTIDGDYHSCNPSAVVCMATPFSKNRRVVTIIDTDVPNGTSTGLVAMVEVVALMIGDI
EEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
VQAYSSRGYESPHSMEIGMFVEKGQPKSLYRPGSSTDILLFQPGRIRFCEDLLSNMRRSG
HHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
VSSRFSRGFGAPLVETDIRVRSLIGQAVN
HHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQHQYIERDSGQIVTERLLADDMIRLLYHGVRENSGRLFDLLISSRASQILGMIQFDRPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCC
LSPRTLAARYGIDTDELLEPAEKLNTLRKLFERRIRYEACRPMPDERGAVVSPADARIVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEE
GSLRETSLIFLKDKFFGYEELLGRQKTDWVGGFENGDFAVFRLTPDKYHYNHAPVAGRVL
ECCCCCEEEEEEHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE
DFYTIDGDYHSCNPSAVVCMATPFSKNRRVVTIIDTDVPNGTSTGLVAMVEVVALMIGDI
EEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
VQAYSSRGYESPHSMEIGMFVEKGQPKSLYRPGSSTDILLFQPGRIRFCEDLLSNMRRSG
HHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
VSSRFSRGFGAPLVETDIRVRSLIGQAVN
HHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA