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The map label for this gene is yfiO [C]

Identifier: 118581055

GI number: 118581055

Start: 2871126

End: 2871866

Strand: Reverse

Name: yfiO [C]

Synonym: Ppro_2643

Alternate gene names: 118581055

Gene position: 2871866-2871126 (Counterclockwise)

Preceding gene: 118581056

Following gene: 118581054

Centisome position: 71.65

GC content: 58.43

Gene sequence:

>741_bases
ATGAAGATGGGATTCAGGGCTGTTTTTGCGGCTCTCTGTACGCTGACGTTGCTCCAGGGGTGCGCCGAACTGAAGCTGAA
CAAGCCGACCGACGAACTCTACCGGGATGGCGAGGCCTCGTTCCAGAAGGGGAAATACGAGGATGCCGTGATACAGTGGC
GGCGGGTCAAGGAGAGTTTCCCGCCTCCGGAATTGTCGGCCAGGGTGGAGATCAATATCGCCGATGCCTATTTCCTCAAC
AAGGATTACATCGAGGCGGCCGCCGAGTATGAAAACTTCCGCAAACTGCACCCGAACCACGAGTTGATGGGCTATGCCCT
CTACGGCCAGGGGCTCAGCAATTTCAAACAGATCAAGGGGATCGACACGGACCAGACGCCGGTCAAGAATGCGTTGTCAC
TCTTTGAGTCGTACACCAAGCTCTACCCTGGCGGAGCCAACCTGCCGGATGTGCAGGCCCGGATCGTCGATTGCCGCGAC
AAGCAGTTGCAGTACGAACTGTACGTGGGCAAGTTCTACCTGCGCACCGGATCCTACCCGGCCGCCATCGCCCGCTTCGA
GGAGGCGCTGAAGGGATTCGGGGACCTGCCGCGCAGCGACGAGACGCTCTTTTATCTGGGTAGTGCCTATGTGGAGAACG
GCCAGAAGCCCAAGGGGCAGGAGGTCTATACCCGCCTGCTTAAGGAGCATGCCACGAGCTCCTTTGTCCCTGAAGTCAAA
AAGGCTATGGCTGCGCTGTGA

Upstream 100 bases:

>100_bases
CTCATCTCCTTCCCGTGGCAGGTTCCCGCGGGAACAATGTGTATCTCTTCCAAGGGTGGTGTCTGTCGGAGCAGTATTCT
GTTTGTACGATGGGGAAAAC

Downstream 100 bases:

>100_bases
TGGGAACGGATCAGATCGCCTGCTGGGCCATGATCGTGGCCGCTTATCTGCTCGGTTCCATACCGACCGGGCTTTTGCTG
GGAAAACTGTGCGGCGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKMGFRAVFAALCTLTLLQGCAELKLNKPTDELYRDGEASFQKGKYEDAVIQWRRVKESFPPPELSARVEINIADAYFLN
KDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKGIDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRD
KQLQYELYVGKFYLRTGSYPAAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHATSSFVPEVK
KAMAAL

Sequences:

>Translated_246_residues
MKMGFRAVFAALCTLTLLQGCAELKLNKPTDELYRDGEASFQKGKYEDAVIQWRRVKESFPPPELSARVEINIADAYFLN
KDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKGIDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRD
KQLQYELYVGKFYLRTGSYPAAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHATSSFVPEVK
KAMAAL
>Mature_246_residues
MKMGFRAVFAALCTLTLLQGCAELKLNKPTDELYRDGEASFQKGKYEDAVIQWRRVKESFPPPELSARVEINIADAYFLN
KDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKGIDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRD
KQLQYELYVGKFYLRTGSYPAAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHATSSFVPEVK
KAMAAL

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=228, Percent_Identity=25.8771929824561, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27843; Mature: 27843

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMGFRAVFAALCTLTLLQGCAELKLNKPTDELYRDGEASFQKGKYEDAVIQWRRVKESF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCC
PPPELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKG
CCCCCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHHCCCCCHHEEEEHHHCCHHHHHHHCC
IDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGKFYLRTGSYP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCCH
AAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHATSSFVPEVK
HHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHH
KAMAAL
HHHHCC
>Mature Secondary Structure
MKMGFRAVFAALCTLTLLQGCAELKLNKPTDELYRDGEASFQKGKYEDAVIQWRRVKESF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCC
PPPELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKG
CCCCCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHHCCCCCHHEEEEHHHCCHHHHHHHCC
IDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGKFYLRTGSYP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCCH
AAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHATSSFVPEVK
HHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHH
KAMAAL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]