| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581021
Identifier: 118581021
GI number: 118581021
Start: 2835157
End: 2836335
Strand: Direct
Name: 118581021
Synonym: Ppro_2609
Alternate gene names: NA
Gene position: 2835157-2836335 (Clockwise)
Preceding gene: 118581020
Following gene: 118581022
Centisome position: 70.74
GC content: 63.61
Gene sequence:
>1179_bases ATGACCGGCATCGACATCGAAAAAATCCTTGAACTGGCCCCCTCCCCCGCCTATGTGGTGGACCTGGGACGACTGCGCCA CAACCTGGCAATCCTGGACAACGTGCAGAAACGGAGCGGCGCCAAGATACTCATGGCGCTGAAGGCCTTCTCCATGTGGA GCACCTTCCCCCTGATCAGCCGCACCCTGGCCGGGGTCTGCGCCAGTTCCCCCTGGGAGGCGCGCCTGGGACGTGAGGAA TTCGGCGGGGAGGTGCACAGTTTCGCCGCCGCCTTCAAGGAGCGCGATGTGGTGGAGCTCTTGGAGATCTCCAACCACCT GGTCTTCAACTCCCTTGGCCAGCTGGAGCGCTTCCGCCCGCTCTGGGAAGCGAAGCATGGAAATGTCTCCATCGGACTGC GGGTCAACCCGGAACACTCCGAGGGGCACACCGCCATCTACGACCCCTGCGCCCCCTGCTCGCGCCTGGGCATCCCCCTG GCGGAATTTGAGCGAAGAATCGGTGAGGTTGGTGAGGAGCGCGCCCTGAACGGCGTGGAGGGGCTGCACTTCCACACCCT CTGCGAGCAGCTCTTCCAGCCGCTGGAGCGCACGGCACGGGCCTTCGAGGAGAAGTTCGGCAGGTTCCTGCCGCGCATGA AATGGCTCAACCTGGGGGGAGGACACCACATCACCCGGGAGGGGTATGACATCGACGGCCTGGTGGATCTGGTCAGCTAC TTCCGGGAGAAGTATGATCTTACGGTCTACCTGGAGCCGGGGGAAGCCATCGCCATCGGCACCGGCATCCTGGTGGGCGA GGTGCTGGACCTGGTGCACAACGCCATGGATATCGCCATACTGGACCTGTCAGCCACCTGCCACATGCCGGACATCCTTG AGATGCCCTACCGTCCCGACATCAAAAACGGCTTTGATCCTGGCGAAAAGGCGCACAGCTACCGCCTGGCCGGCCCCTCC TGCCTGGCCGGCGACGTGATCGGCGACTGGTCCTTTGAACGGCCGCTCCTGCCGGGAGATCGCCTGGCATTCCTGGACAT GGCCCACTACACCATGGTCAAGACCACCACCTTCAACGGCATCCAGCACCCGGCCATCTGCACCTATGAGCCGGAAACCG GCGAACTCAAGGTCGTGCGCACCTTCGCCTATGGCGACTTCAGGGCGCGCCTCTCCTGA
Upstream 100 bases:
>100_bases TGAGCGGTCACCCCGACGGCGGCCAGACCTCCCCCGGCAAGGGCAAGGGGAACGGCAAGGGACATGGCAAAGGGCACGAC AAGTAGGGGCAACTCAGCAC
Downstream 100 bases:
>100_bases CATGGCCCTGAAGAGCAAACTCTGGATGACCGGCAGCCTGGAATGGTTCACCTTCATCGACAACGAAGAGGTCTACCTGG GCAAACGGGAGGTGCCTGTG
Product: carboxynorspermidine decarboxylase
Products: NA
Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTGIDIEKILELAPSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLISRTLAGVCASSPWEARLGREE FGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRPLWEAKHGNVSIGLRVNPEHSEGHTAIYDPCAPCSRLGIPL AEFERRIGEVGEERALNGVEGLHFHTLCEQLFQPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSY FREKYDLTVYLEPGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPDIKNGFDPGEKAHSYRLAGPS CLAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNGIQHPAICTYEPETGELKVVRTFAYGDFRARLS
Sequences:
>Translated_392_residues MTGIDIEKILELAPSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLISRTLAGVCASSPWEARLGREE FGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRPLWEAKHGNVSIGLRVNPEHSEGHTAIYDPCAPCSRLGIPL AEFERRIGEVGEERALNGVEGLHFHTLCEQLFQPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSY FREKYDLTVYLEPGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPDIKNGFDPGEKAHSYRLAGPS CLAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNGIQHPAICTYEPETGELKVVRTFAYGDFRARLS >Mature_391_residues TGIDIEKILELAPSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLISRTLAGVCASSPWEARLGREEF GGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRPLWEAKHGNVSIGLRVNPEHSEGHTAIYDPCAPCSRLGIPLA EFERRIGEVGEERALNGVEGLHFHTLCEQLFQPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSYF REKYDLTVYLEPGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPDIKNGFDPGEKAHSYRLAGPSC LAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNGIQHPAICTYEPETGELKVVRTFAYGDFRARLS
Specific function: Unknown
COG id: COG0019
COG function: function code E; Diaminopimelate decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43792; Mature: 43661
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIDIEKILELAPSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLIS CCCCCHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RTLAGVCASSPWEARLGREEFGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRP HHHHHHHCCCCHHHHCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LWEAKHGNVSIGLRVNPEHSEGHTAIYDPCAPCSRLGIPLAEFERRIGEVGEERALNGVE HHHCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCC GLHFHTLCEQLFQPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCEECCCCCCHHHHHHHHHH FREKYDLTVYLEPGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPD HHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCC IKNGFDPGEKAHSYRLAGPSCLAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNG CCCCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCC IQHPAICTYEPETGELKVVRTFAYGDFRARLS CCCCEEEEECCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure TGIDIEKILELAPSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLIS CCCCHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RTLAGVCASSPWEARLGREEFGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRP HHHHHHHCCCCHHHHCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LWEAKHGNVSIGLRVNPEHSEGHTAIYDPCAPCSRLGIPLAEFERRIGEVGEERALNGVE HHHCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCC GLHFHTLCEQLFQPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCEECCCCCCHHHHHHHHHH FREKYDLTVYLEPGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPD HHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCC IKNGFDPGEKAHSYRLAGPSCLAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNG CCCCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCC IQHPAICTYEPETGELKVVRTFAYGDFRARLS CCCCEEEEECCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA