| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581019
Identifier: 118581019
GI number: 118581019
Start: 2833411
End: 2834607
Strand: Direct
Name: 118581019
Synonym: Ppro_2607
Alternate gene names: NA
Gene position: 2833411-2834607 (Clockwise)
Preceding gene: 118581018
Following gene: 118581020
Centisome position: 70.69
GC content: 61.49
Gene sequence:
>1197_bases ATGAGCAAGGTACTGATTATCGGAGCAGGCGGAGTCGGCAGCGTCGTCACCCACAAGTGTGCCCAGCGGCGGGACATCTT CAGCGAGATCACCCTAGCCTCGCGGACCAAGAGCAAGTGCGACGCCATCGCGGCCCAGTTAGGCAACAGCATCAACACCG CCCGGGTTGACGCCGACAATGTCCCGGAACTGGTGTCCCTGCTCAGACAGGTTCAGCCAAAACTGGTCATCAATGTCGCC CTCCCCTACCAGGACCTGACCATCATGGATGCCTGCCTGGAAACCGGTGTGAACTACCTGGACACCGCCAACTACGAGCC CATCGACACGGCAAAATTCGAGTATTCCTGGCAGTGGGCCTACCAGGAGCGCTTCAAAGACGCCGGCCTGATGGCACTTC TGGGCTCCGGCTTCGACCCGGGGGTGACCAACGTCTACACCGCCCTGGCGGCGAAAAAGCACCTGGACGAGGTTCAGGAG ATCGACATCATCGATGCCAACGCCGGCTCCCACGGCCAGCCCTTCGCCACCAACTTCAACCCGGAGATCAACATCCGCGA GGTGACCGCCATCTGCCGCCACTGGGAGAACGGCCAGTGGGTGGAGTCCGGCGCCCTGGCCACTAAACATTCCTTCGACT TTCCCGAGGGGATCGGCCCCATGAACATCTACCGCATGTACCATGAGGAGATGGAGTCGCTGGTCAAACATATCCCCAGC ATCAAAAAGGCCCAGTTCTGGATGACCTTCTCGGACAACTACCTGAAGCACCTGGAGGTGCTGCAGAACGTGGGCATGAC CCGCATCGACGAGGTGGAGTTCCAGGGGCAGAAGATCGTGCCGATCCAGTTTCTGAAGGCGCTCCTCCCCGACCCCGGCT CCCTGGGTCCCCTGACCAAGGGGAAGACCTGCATCGGCGTCATCGCCCGCGGGCTGAAGGACGGCAAACGAAGGCAGGTC TACATCTACAACATCTGCGACCACCAGGAGTGCTACCGGGAGGTCAGCTCCCAGGCCATCAGCTACACCACCGGCGTGCC GGCGGTGGTGGGGGCGATCATGATGCTGACCAACAAGTGGCACGGAGCTGGCGTCTTCAACATGGAGCAGTTCGATCCCG AACCGTTCCTGGATGAACTGGGGCCCATGGGGCTGCCCACCGTGGTGGTGGATGGCGGCGACTGGCCCGAGCTGTAA
Upstream 100 bases:
>100_bases GGCCTGAAGAGGGTAACGGACCGGAACAAACGGTATAATTCTTATTCAGGCAGGCAATTCGCTGCCGTTCGATTCATGGC AGCAGGAGGAGCGTACAGAT
Downstream 100 bases:
>100_bases CCATCAGACCGGATTTGGCGGTTCACACCTGCCGTCCCCTGGTTGATCCACTATTCCATCAAGAAGGAGTATCAGCATGA AGCGCCTGGTCTGCATCTGC
Product: saccharopine dehydrogenase
Products: L-lysine; 2-oxoglutarate; NADH; H+
Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADNVPELVSLLRQVQPKLVINVA LPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWAYQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQE IDIIDANAGSHGQPFATNFNPEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTKGKTCIGVIARGLKDGKRRQV YIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKWHGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL
Sequences:
>Translated_398_residues MSKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADNVPELVSLLRQVQPKLVINVA LPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWAYQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQE IDIIDANAGSHGQPFATNFNPEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTKGKTCIGVIARGLKDGKRRQV YIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKWHGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL >Mature_397_residues SKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADNVPELVSLLRQVQPKLVINVAL PYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWAYQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQEI DIIDANAGSHGQPFATNFNPEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPSI KKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTKGKTCIGVIARGLKDGKRRQVY IYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKWHGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.5.1.7
Molecular weight: Translated: 44172; Mature: 44041
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADN CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC VPELVSLLRQVQPKLVINVALPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWA HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEHH YQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQEIDIIDANAGSHGQPFATNFN HHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC PEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS CCCCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTK CCCEEEEEEECHHHHHHHHHHHHCCCCEEHHHHCCCCEECHHHHHHHHCCCCCCCCCCCC GKTCIGVIARGLKDGKRRQVYIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKW CCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC HGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL CCCCCCCHHHCCCCHHHHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure SKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADN CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC VPELVSLLRQVQPKLVINVALPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWA HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEHH YQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQEIDIIDANAGSHGQPFATNFN HHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC PEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS CCCCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTK CCCEEEEEEECHHHHHHHHHHHHCCCCEEHHHHCCCCEECHHHHHHHHCCCCCCCCCCCC GKTCIGVIARGLKDGKRRQVYIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKW CCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC HGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL CCCCCCCHHHCCCCHHHHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N6-(L-1,3-dicarboxypropyl)-L-lysine; NAD+; H2O
Specific reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-lysine + 2-oxoglutarate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA