| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is lon [H]
Identifier: 118581016
GI number: 118581016
Start: 2828012
End: 2830483
Strand: Reverse
Name: lon [H]
Synonym: Ppro_2604
Alternate gene names: 118581016
Gene position: 2830483-2828012 (Counterclockwise)
Preceding gene: 118581017
Following gene: 118581015
Centisome position: 70.62
GC content: 61.89
Gene sequence:
>2472_bases TTGAGTGAAACCGAAAAAGACATTGAAAAGCAGGATGCGGAAGAGCTGAAAATACCCGATGAATTACCGCTCTTGCCGGT ACGGGACGTGGTGGTCTACCCGTTCATGATCATTCCGCTTTTCGTTGGGCGCGAGATGTCGGTCAAAGCCGTGGACAGCG CCCTGGCGGGAGACCGCATGATCCTTTTGGCCACCCAGTACGAGATCAGCGAGGAAGATCCACCGCCGGACAAGATTTAC GGCGTCGGCACGGTGGCCATGATCATGCGCATGCTCAAACTGCCCGACGGCAGGATCAAGATCCTGGTCCAGGGGTTGGC CAAGGCCCGCATCACCGAATTTACCTCGGAGAAGCCGTTCTATACGGTACGTGTCGAACGCTTGAACGATATGCCGCTGC TTGATGCGACCCTGGAGACAGAGGCCCTGGTGCGCACCGTGCGGGAGCAGTTGGCCAAGGTTGTGGAACTGGGCAAGCAG GTCTCCCCCGAGGTGATAGTCATACTGGAGAATATCCAGGATCCGGGGAGCATGGCCGACCTGATCGCCAGCAACATGGG GCTCAAGGTTGCCGACGCCCAGCAGCTCCTGGAAACGGTGGATCCCATAACCCGCCTGACCAAGATCAACGAACTGCTCA ATCGTGAGGTGGAACTCTTAAGCGTGCAGGCCAAGATCCAGAGCGCGGCCCGCGAGGAGATGGGCAAGAACCAGCGGGAG TACTACCTGCGGGAGCAGATGCGGGCCATCCAGCAGGAGCTGGGGGACGGCGAGGGGAAGGAGGATCTGATCGAGATCCG CAAGGCCATCGAGTCCGCCAGAATGCCGGAGAGCGTGCAGAAGGAGGCGCTGAAACAGCTGGGCCGCCTGGAGAACATGC ACCCCGATGCCGGCGAGGCCGGCATCATCCGCACCTACCTGGACTGGCTGGTGGAGATCCCCTGGAGCAAGTCCAGCCGC GACAGCCTGGACATCGGTCGTGCCGAGAAGATCCTGAATGAGGACCACTTCTATCTGGACAAGATCAAGGAGCGCATCCT GGAGTTCCTCTCCGTGCGCAAGCTGAAGAAGAAGATGAAAGGGCCGATCCTCTGCTTCGTCGGCCCTCCCGGCGTGGGCA AGACCTCCCTGGGCAAGTCCATCGCCCGGGCCATGAACCGCAAGTTCGTGCGCATCTCCCTGGGGGGGGTGCGTGACGAG GCCGAGATTCGCGGTCATCGCCGCACCTACATCGGCGCGCTTCCCGGGCGTATCATCCAGGGGATGAAGCAGGCCGGCAC CAACAATCCGGTCTTCATGCTGGACGAGCTGGACAAGCTGGGCTACGACTACAAGGGGGATCCCTCATCGGCGCTCCTGG AGGTGCTGGACCCGGAGCAGAACCACTCCTTCTCCGACCACTACATCAACCAGCCCTACAACCTGTCCAACGTGATGTTC ATCGCCACCGCCAACCAGATCGACCCGGTGCCGTCGGCCCTGCGCGACCGCATGGAGGTGATCACCCTCTCGGGCTACAC CGAGGAGGAGAAGCTGGAGATCTCCCGGCGTTTCCTGGTGCCGCGCCAGATGAAGGAGAATGGCCTGAAGGAGAAGAACA TCGCCTTTGACGACGAGGCCATTGCCGAGATCATCGCCAAATATACCCGCGAGGCCGGGCTGCGCAACCTGGAGCGGGAG ATCGGCACGGTCTGCCGCAAGGTGGCCCGCAAGGTGGCCGAGGGGCAGAAACGCATCACCCGGGTGACTGCCAAGAACCT GCATACCTTCCTGGGCGCGCCCAAGTTCATGCGGGAAGAGGACCTGGACAGAAACGAAATCGGCGTGGTCAACGGCCTGG CCTGGACCCCGGTGGGGGGTGAAATCCTGCACATCGAAGCGTCACAGATGCAGGGCAAGGCCGGCCTGACCCTCACCGGT CAGCTGGGGGACGTGATGAAGGAGTCGGCCCAGGCCGCCCATTCCTACATCCGCGCCCATGCCGAGGAACTGAGCATCAA GCCGGAGTTCTTTCAGCAACATGAGATCCACGTGCATGTTCCGGCCGGCGCTATCCCCAAGGACGGCCCTTCCGCCGGGG TCGCCATGACAACGGCCCTGGTCTCGGTCATAACCCGCATTCCGGTCAGGAAAGACGTGGCCATGACCGGCGAGATCACC CTGCGGGGCAAGGTTCTGCCCATCGGCGGGTTGAAGGAGAAGATCCTGGCCGCCGTACGCTCGGAGATGAAAACGGTGAT CATACCGGCCCAGAACAAGAAGGATTTGGAGGACGTCCCGGCCGAGATCCTCAAGAGGGTAAAGATCGTGCCGGTGACCA AGATCGACGAGGTGCTCAAGCTGGCACTGGAGAAGTATCCGCCCCCCCTGGCGGCCACTCCGGCGGGGAGTGTCCCCAAA AAGCGGACAACCAGAGGCGCCGCGGCGCCGAATTCGCCCGATCAGGGACTCCCGGCCAGCGCCAAGGGATAG
Upstream 100 bases:
>100_bases GCAATCCCTGCTCCATTACCGCCGAATACCGCTTGGGCGTGCTGCGGGTGACGTGCCCAAAGAGTGATGGCCTGCAGGTA CCCATAAAGGAGATTACACC
Downstream 100 bases:
>100_bases CCGTTACTGAGACGCTAACCGGAGAGGGGGATACGATGCCGTCCATGGCATCCTATCCCCCTCCTTTTTGGAGGGAAGGT CAATGGATCTGCGCGATAGC
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 823; Mature: 822
Protein sequence:
>823_residues MSETEKDIEKQDAEELKIPDELPLLPVRDVVVYPFMIIPLFVGREMSVKAVDSALAGDRMILLATQYEISEEDPPPDKIY GVGTVAMIMRMLKLPDGRIKILVQGLAKARITEFTSEKPFYTVRVERLNDMPLLDATLETEALVRTVREQLAKVVELGKQ VSPEVIVILENIQDPGSMADLIASNMGLKVADAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQRE YYLREQMRAIQQELGDGEGKEDLIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEAGIIRTYLDWLVEIPWSKSSR DSLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMKGPILCFVGPPGVGKTSLGKSIARAMNRKFVRISLGGVRDE AEIRGHRRTYIGALPGRIIQGMKQAGTNNPVFMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMF IATANQIDPVPSALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEAIAEIIAKYTREAGLRNLERE IGTVCRKVARKVAEGQKRITRVTAKNLHTFLGAPKFMREEDLDRNEIGVVNGLAWTPVGGEILHIEASQMQGKAGLTLTG QLGDVMKESAQAAHSYIRAHAEELSIKPEFFQQHEIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEIT LRGKVLPIGGLKEKILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLKLALEKYPPPLAATPAGSVPK KRTTRGAAAPNSPDQGLPASAKG
Sequences:
>Translated_823_residues MSETEKDIEKQDAEELKIPDELPLLPVRDVVVYPFMIIPLFVGREMSVKAVDSALAGDRMILLATQYEISEEDPPPDKIY GVGTVAMIMRMLKLPDGRIKILVQGLAKARITEFTSEKPFYTVRVERLNDMPLLDATLETEALVRTVREQLAKVVELGKQ VSPEVIVILENIQDPGSMADLIASNMGLKVADAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQRE YYLREQMRAIQQELGDGEGKEDLIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEAGIIRTYLDWLVEIPWSKSSR DSLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMKGPILCFVGPPGVGKTSLGKSIARAMNRKFVRISLGGVRDE AEIRGHRRTYIGALPGRIIQGMKQAGTNNPVFMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMF IATANQIDPVPSALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEAIAEIIAKYTREAGLRNLERE IGTVCRKVARKVAEGQKRITRVTAKNLHTFLGAPKFMREEDLDRNEIGVVNGLAWTPVGGEILHIEASQMQGKAGLTLTG QLGDVMKESAQAAHSYIRAHAEELSIKPEFFQQHEIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEIT LRGKVLPIGGLKEKILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLKLALEKYPPPLAATPAGSVPK KRTTRGAAAPNSPDQGLPASAKG >Mature_822_residues SETEKDIEKQDAEELKIPDELPLLPVRDVVVYPFMIIPLFVGREMSVKAVDSALAGDRMILLATQYEISEEDPPPDKIYG VGTVAMIMRMLKLPDGRIKILVQGLAKARITEFTSEKPFYTVRVERLNDMPLLDATLETEALVRTVREQLAKVVELGKQV SPEVIVILENIQDPGSMADLIASNMGLKVADAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQREY YLREQMRAIQQELGDGEGKEDLIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEAGIIRTYLDWLVEIPWSKSSRD SLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMKGPILCFVGPPGVGKTSLGKSIARAMNRKFVRISLGGVRDEA EIRGHRRTYIGALPGRIIQGMKQAGTNNPVFMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMFI ATANQIDPVPSALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEAIAEIIAKYTREAGLRNLEREI GTVCRKVARKVAEGQKRITRVTAKNLHTFLGAPKFMREEDLDRNEIGVVNGLAWTPVGGEILHIEASQMQGKAGLTLTGQ LGDVMKESAQAAHSYIRAHAEELSIKPEFFQQHEIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEITL RGKVLPIGGLKEKILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLKLALEKYPPPLAATPAGSVPKK RTTRGAAAPNSPDQGLPASAKG
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=837, Percent_Identity=39.7849462365591, Blast_Score=578, Evalue=1e-165, Organism=Homo sapiens, GI21396489, Length=840, Percent_Identity=37.8571428571429, Blast_Score=544, Evalue=1e-154, Organism=Escherichia coli, GI1786643, Length=777, Percent_Identity=51.0939510939511, Blast_Score=807, Evalue=0.0, Organism=Caenorhabditis elegans, GI17556486, Length=797, Percent_Identity=35.3826850690088, Blast_Score=480, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17505831, Length=690, Percent_Identity=38.4057971014493, Blast_Score=479, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6319449, Length=721, Percent_Identity=38.6962552011096, Blast_Score=501, Evalue=1e-142, Organism=Drosophila melanogaster, GI24666867, Length=685, Percent_Identity=43.3576642335766, Blast_Score=549, Evalue=1e-156, Organism=Drosophila melanogaster, GI221513036, Length=685, Percent_Identity=43.3576642335766, Blast_Score=549, Evalue=1e-156,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 91483; Mature: 91352
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETEKDIEKQDAEELKIPDELPLLPVRDVVVYPFMIIPLFVGREMSVKAVDSALAGDRM CCCCHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCE ILLATQYEISEEDPPPDKIYGVGTVAMIMRMLKLPDGRIKILVQGLAKARITEFTSEKPF EEEEEEEECCCCCCCCHHEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE YTVRVERLNDMPLLDATLETEALVRTVREQLAKVVELGKQVSPEVIVILENIQDPGSMAD EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH LIASNMGLKVADAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQRE HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH YYLREQMRAIQQELGDGEGKEDLIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC GIIRTYLDWLVEIPWSKSSRDSLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMK HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC GPILCFVGPPGVGKTSLGKSIARAMNRKFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQ CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCHHHHHHCCHHHHHH GMKQAGTNNPVFMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMF HHHHCCCCCCEEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEE IATANQIDPVPSALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEA EEECCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH IAEIIAKYTREAGLRNLEREIGTVCRKVARKVAEGQKRITRVTAKNLHTFLGAPKFMREE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC DLDRNEIGVVNGLAWTPVGGEILHIEASQMQGKAGLTLTGQLGDVMKESAQAAHSYIRAH CCCCCCCCEECCCEECCCCCEEEEEEHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHH AEELSIKPEFFQQHEIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEIT HHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECEEE LRGKVLPIGGLKEKILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLK EEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH LALEKYPPPLAATPAGSVPKKRTTRGAAAPNSPDQGLPASAKG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SETEKDIEKQDAEELKIPDELPLLPVRDVVVYPFMIIPLFVGREMSVKAVDSALAGDRM CCCHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCE ILLATQYEISEEDPPPDKIYGVGTVAMIMRMLKLPDGRIKILVQGLAKARITEFTSEKPF EEEEEEEECCCCCCCCHHEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE YTVRVERLNDMPLLDATLETEALVRTVREQLAKVVELGKQVSPEVIVILENIQDPGSMAD EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH LIASNMGLKVADAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQRE HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH YYLREQMRAIQQELGDGEGKEDLIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC GIIRTYLDWLVEIPWSKSSRDSLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMK HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC GPILCFVGPPGVGKTSLGKSIARAMNRKFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQ CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCHHHHHHCCHHHHHH GMKQAGTNNPVFMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMF HHHHCCCCCCEEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEE IATANQIDPVPSALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEA EEECCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH IAEIIAKYTREAGLRNLEREIGTVCRKVARKVAEGQKRITRVTAKNLHTFLGAPKFMREE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC DLDRNEIGVVNGLAWTPVGGEILHIEASQMQGKAGLTLTGQLGDVMKESAQAAHSYIRAH CCCCCCCCEECCCEECCCCCEEEEEEHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHH AEELSIKPEFFQQHEIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEIT HHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECEEE LRGKVLPIGGLKEKILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLK EEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH LALEKYPPPLAATPAGSVPKKRTTRGAAAPNSPDQGLPASAKG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA