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The map label for this gene is arnC [H]

Identifier: 118580997

GI number: 118580997

Start: 2803301

End: 2804251

Strand: Reverse

Name: arnC [H]

Synonym: Ppro_2585

Alternate gene names: 118580997

Gene position: 2804251-2803301 (Counterclockwise)

Preceding gene: 118580998

Following gene: 118580996

Centisome position: 69.97

GC content: 58.99

Gene sequence:

>951_bases
GTGGATTTCAGTATTGTAGTGCCTATCTATAACGAACAGGAAAACATCGACGAACTCTATGGCGCCATCGTGGGTGCGCT
GGATCCCGTCGATGCCTGCTTTGAAATCATCATGGTGGACGACGGTTCCCGGGATGGATCCTTTGATGCGCTGAAGCGTC
TGGCGTCCGGGGATGAACGCCTCAAGGTGATCAGGTTTCGCCGCAACTTCGGCCAGACCGCGGCCATGGCCGCCGGTTTC
GACGCAGCCAGCGGCGACATCATCATCCCCATGGATGGCGATCTGCAGAACGATCCATCGGACATACCACGTCTGATCGC
AAAACTCCACGAGGGGTACGATGTGGTCTCCGGCTGGCGCAACGAACGCAAGGATACCTTCATCACCCGCAAGATTCCGT
CAGTCCTGGCAAATGCCCTGATCTCGTTCTTTACCGGCGTACATCTCCACGATTACGGCTGCACCCTGAAGGCCTACCGC
CGCGAGGTGCTGGACGGCATCAGCCTGTACGGCGAGATGCACCGCTTCGTGCCTGCCCTGGCGTCCCAGGTGGGGGCCAG
GGTCACCGAACTTCCGGTCAGGCACCATCCCCGCCGTCACGGAGTGAGCAAATACGGTATCTCGCGCACCGTGCGGGTGA
TCCTGGACCTGATGACGGTCAAGTTTCTGCTGGCCTACTCCACCAAGCCGATCCAGCTGTTCGGCAAGTGGGGGCTGTAC
ACCCTCATGGCCGGGTTTCTGAGCGGCGCCATGACCATCTACATGAAGCTGTTCGAACATCTCAGCATGAACAGAAACCC
GCTGCTGATCCTGACCGCCTTCCTTGTGTTCATGGGGGTGCAGTTCATCGTGCTGGGGCTGTTGGGAGAGGTCAACGCCC
GCACCTACTACGAAGCCCAGGGCAAGCCGATTTATGTGGTCAGGGAGAAGATCAACCTGGGGGCTGAGTGA

Upstream 100 bases:

>100_bases
GTGATGGTGAACGCTTGCGCCGGGGCGATGGTTGCGCTGCACCAATCTCCGCGAAACGGCGCACAGGCCGGCAGGAAGGA
ATCCTGCCAGGGAGCATGAT

Downstream 100 bases:

>100_bases
GGGGTGAGGAGTGATGGGTAAGACCTATTCCGGGGGGCGGGTTCCCCCGGGCGTTGTTGTCGAAGAAACGGCTTGCCGGA
CGGATACGGCTGACCAGGCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MDFSIVVPIYNEQENIDELYGAIVGALDPVDACFEIIMVDDGSRDGSFDALKRLASGDERLKVIRFRRNFGQTAAMAAGF
DAASGDIIIPMDGDLQNDPSDIPRLIAKLHEGYDVVSGWRNERKDTFITRKIPSVLANALISFFTGVHLHDYGCTLKAYR
REVLDGISLYGEMHRFVPALASQVGARVTELPVRHHPRRHGVSKYGISRTVRVILDLMTVKFLLAYSTKPIQLFGKWGLY
TLMAGFLSGAMTIYMKLFEHLSMNRNPLLILTAFLVFMGVQFIVLGLLGEVNARTYYEAQGKPIYVVREKINLGAE

Sequences:

>Translated_316_residues
MDFSIVVPIYNEQENIDELYGAIVGALDPVDACFEIIMVDDGSRDGSFDALKRLASGDERLKVIRFRRNFGQTAAMAAGF
DAASGDIIIPMDGDLQNDPSDIPRLIAKLHEGYDVVSGWRNERKDTFITRKIPSVLANALISFFTGVHLHDYGCTLKAYR
REVLDGISLYGEMHRFVPALASQVGARVTELPVRHHPRRHGVSKYGISRTVRVILDLMTVKFLLAYSTKPIQLFGKWGLY
TLMAGFLSGAMTIYMKLFEHLSMNRNPLLILTAFLVFMGVQFIVLGLLGEVNARTYYEAQGKPIYVVREKINLGAE
>Mature_316_residues
MDFSIVVPIYNEQENIDELYGAIVGALDPVDACFEIIMVDDGSRDGSFDALKRLASGDERLKVIRFRRNFGQTAAMAAGF
DAASGDIIIPMDGDLQNDPSDIPRLIAKLHEGYDVVSGWRNERKDTFITRKIPSVLANALISFFTGVHLHDYGCTLKAYR
REVLDGISLYGEMHRFVPALASQVGARVTELPVRHHPRRHGVSKYGISRTVRVILDLMTVKFLLAYSTKPIQLFGKWGLY
TLMAGFLSGAMTIYMKLFEHLSMNRNPLLILTAFLVFMGVQFIVLGLLGEVNARTYYEAQGKPIYVVREKINLGAE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=230, Percent_Identity=30.4347826086957, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI1788588, Length=310, Percent_Identity=37.0967741935484, Blast_Score=207, Evalue=9e-55,
Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=29.7734627831715, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71999402, Length=221, Percent_Identity=30.316742081448, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325441, Length=112, Percent_Identity=33.9285714285714, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24585265, Length=229, Percent_Identity=30.1310043668122, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 35372; Mature: 35372

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSIVVPIYNEQENIDELYGAIVGALDPVDACFEIIMVDDGSRDGSFDALKRLASGDER
CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHCCHHH
LKVIRFRRNFGQTAAMAAGFDAASGDIIIPMDGDLQNDPSDIPRLIAKLHEGYDVVSGWR
HHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
NERKDTFITRKIPSVLANALISFFTGVHLHDYGCTLKAYRREVLDGISLYGEMHRFVPAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQVGARVTELPVRHHPRRHGVSKYGISRTVRVILDLMTVKFLLAYSTKPIQLFGKWGLY
HHHHCCHHHHCCHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
TLMAGFLSGAMTIYMKLFEHLSMNRNPLLILTAFLVFMGVQFIVLGLLGEVNARTYYEAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GKPIYVVREKINLGAE
CCEEEEEEECCCCCCC
>Mature Secondary Structure
MDFSIVVPIYNEQENIDELYGAIVGALDPVDACFEIIMVDDGSRDGSFDALKRLASGDER
CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHCCHHH
LKVIRFRRNFGQTAAMAAGFDAASGDIIIPMDGDLQNDPSDIPRLIAKLHEGYDVVSGWR
HHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
NERKDTFITRKIPSVLANALISFFTGVHLHDYGCTLKAYRREVLDGISLYGEMHRFVPAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQVGARVTELPVRHHPRRHGVSKYGISRTVRVILDLMTVKFLLAYSTKPIQLFGKWGLY
HHHHCCHHHHCCHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
TLMAGFLSGAMTIYMKLFEHLSMNRNPLLILTAFLVFMGVQFIVLGLLGEVNARTYYEAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GKPIYVVREKINLGAE
CCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA