| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is recG [H]
Identifier: 118580930
GI number: 118580930
Start: 2729075
End: 2731411
Strand: Reverse
Name: recG [H]
Synonym: Ppro_2518
Alternate gene names: 118580930
Gene position: 2731411-2729075 (Counterclockwise)
Preceding gene: 118580931
Following gene: 118580929
Centisome position: 68.15
GC content: 66.92
Gene sequence:
>2337_bases ATGCCGATCCTGACCCTGTCAGCGGACAGTTGTCTGACCATTCCCCCTGAACTGCTGGAGAGGCTGGGGGTGAAACCGGG TGATCGCGTGTCGCTGGAAGAGGGGCAGGGAGGGCTGCTACTGCGTGCCGCGCCCCTCCCCACTGCTGTTCCGACGGCAG AGGGCGCACGCTCCGGGCAACCCGGCGAGGGGGTGGGGGACGCACTAGCCCGCAAGAATCTGGAGACCCCTATGCATTCC GTCAAGGGGGTGGGACCCAAGCTGTCCGCCCTGCTGGCCAGGCGGGGAATCGCCTGCGTGGAGGATGCCCTCTACCTGCT GCCCAACCGTTATGAAGACCGCCGCGAACTGCGCCCCATCGCGGCGCTGCGTCCCGGCTTTAACGAGCTCTTCTCCGGCA GGGTCCTGTCTGCCGAGTCGGTGACCAGCAGGGGAGGGAGGCGCTTCTTCGAGGCGCTGCTGGCCGACGACAGCGCGACG GTCACGCTGAAGTGGTTCAACTGCAATCCGACCTTCATGAAGCGGGTCTGGAAGCAGGGCAGACGAGCCCTGGTAACCGG CGAGGTCTCCCGCTTCGCTTCCCAGCTGGAGGTCCACCATCCCGATGTGGAGTGGCTGGCCGAGGGGAGCGAGCCGCGTG ACCTGCTTAGCGCCGACCCGCTCAATTTCGGCGGCATCATCCCGGTCTATCCCCTGACCGAGGGGCTGAGCCAGAAGGTC ATGCGCCGGGTGATGCGGGAGGTGGTGGAGCGCTTCATCCCCTTTGTCCGCGAGCTGGTTCCGCCGGAACTGCTGGAAAG GCTGGGCCTGCCCGGCCTGCGCCACTCCCTGGGCCATCTGCATACCCCTCCGGTGGACGAGCGGCTGGATGACCTGAACG GTGGATGCAGCGCGGCCCACCGGGCAATCGCATTCGACGAGTTCTTCTTCTGGGAGCTGGGGCTGGCCCTGAAGAGGTGC GGGGTGACCCTGGAGGAGGGGATCGCCTTTCAGGTCAATCACCTCTACACCAAGCCGCTGGTCAGGATGCTCCCCTTCCA GCTGACCAGGGCCCAGCGCAGGGTGCTGTCGGAAATCAAGCAGGACATGATGGCGCCGCACCCCATGCACCGCCTGGTGC AGGGGGATGTGGGCAGCGGCAAGACCCTGGTGGCGCTGATGGCGGCGCTGGTGGCCGTGGAGAACGGTTATCAGGTGGCC ATCATGGCGCCCACGGAGATCCTGGCCGAACAGCACTGGCACACCATTCACCGCTGGTGCGCCGACCTGGGCATAGCCAC CGTCCTGATCACGGCCGGCATGCGCGGCAGGGAGAAGAGCGATGCCCTGGGGAGGGTGGCCGACGGCAGCGCCCGGATCG TGATCGGCACCCATGCCGTGATCCAGGAGAAGGTCGAGTTCGCCCGGCTGGGGTTGGGCATCATCGACGAGCAGCACCGC TTCGGCGTGCTGCAGCGCGCTATCCTCAGGAAAAAGGGGAAGGGGTGCAACCCCGATATCCTGGTGATGACCGCTACCCC CATCCCCCGCACCCTGGCCATGACCCTGTTCGGAGACCTCTCCCTGTCGGTGATCGACGAGCTGCCGCCGGGACGTACGC CGGTGGAGACCAGGGTCACGCCGGAGTCGCAACGCGTGCGGGTCTACGACACCATCCGCCGCGAGGTGGGCCAGGGACGG CAGGCATATGTGGTCTACCCCCTGGTTGAGGAGAACGAGCGGTCGGAGCTCAAGGCCGCCGCCCAGATGGCGGAGCAGCT GGGCAAGGAAATCTTCCCCGACCTGCGCGTCGGCCTGCTGCACGGCCGCATGAACCCCCAGGAGAAGGAGTCGGTCATGG CCTCGTTCAAGGCCCGGGAGTTGGACATCCTGGTCTCCACTACGGTGATCGAGGTGGGTATAGACGTTCCCAACGCCACG GTGATGGTCATCGAACATGCCGAACGCTTCGGCCTTTCCCAGCTGCACCAGCTGCGCGGCAGGGTGGGGCGGGGCGCTGC CAGGTCCCGCTGCATCCTGATGACAAACGGCCGACCTTCCGAGGATGGGGAGAGGCGGCTCAAGGTCATGGAAGCCACCA ATGACGGGTTTCGCATTGCCGAGGCCGATCTGGAGATCCGCGGGCCCGGCGATTTCCTCGGCACGCGCCAGTCCGGCATG CCCGATTTCCGGGTCGCCAACATCCTGCGCGACGGCGCGCTGCTGGAGCAGGCCCGGCAGGCTGCTTTCGGCCTCCTGGA GCAGGATCCCGGCCTGGCCTCGTCCGGCAACGCCCCCCTGCGTGACGAGCTGCTGCGGCGCTGGGGGCAGCGCCTGGAAC TGGGCGCCATCGGGTAA
Upstream 100 bases:
>100_bases TGCTGTACCCCCCATCCCGCGCACCCGCACCAGCCCTCCTGTCAGGTTTGCGGCGCCATTGCGTCATGCAGCCGCTTCAG GCCGCTGTGACGGCGACAGC
Downstream 100 bases:
>100_bases GAATCCAACCAATGATCGATTGAACCATGCGCATACTGACCGGAACGGAAATATTCAACAAGAACTTCGTGGATTCGGTG GTCACCATCGGCAATTTCGA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MPILTLSADSCLTIPPELLERLGVKPGDRVSLEEGQGGLLLRAAPLPTAVPTAEGARSGQPGEGVGDALARKNLETPMHS VKGVGPKLSALLARRGIACVEDALYLLPNRYEDRRELRPIAALRPGFNELFSGRVLSAESVTSRGGRRFFEALLADDSAT VTLKWFNCNPTFMKRVWKQGRRALVTGEVSRFASQLEVHHPDVEWLAEGSEPRDLLSADPLNFGGIIPVYPLTEGLSQKV MRRVMREVVERFIPFVRELVPPELLERLGLPGLRHSLGHLHTPPVDERLDDLNGGCSAAHRAIAFDEFFFWELGLALKRC GVTLEEGIAFQVNHLYTKPLVRMLPFQLTRAQRRVLSEIKQDMMAPHPMHRLVQGDVGSGKTLVALMAALVAVENGYQVA IMAPTEILAEQHWHTIHRWCADLGIATVLITAGMRGREKSDALGRVADGSARIVIGTHAVIQEKVEFARLGLGIIDEQHR FGVLQRAILRKKGKGCNPDILVMTATPIPRTLAMTLFGDLSLSVIDELPPGRTPVETRVTPESQRVRVYDTIRREVGQGR QAYVVYPLVEENERSELKAAAQMAEQLGKEIFPDLRVGLLHGRMNPQEKESVMASFKARELDILVSTTVIEVGIDVPNAT VMVIEHAERFGLSQLHQLRGRVGRGAARSRCILMTNGRPSEDGERRLKVMEATNDGFRIAEADLEIRGPGDFLGTRQSGM PDFRVANILRDGALLEQARQAAFGLLEQDPGLASSGNAPLRDELLRRWGQRLELGAIG
Sequences:
>Translated_778_residues MPILTLSADSCLTIPPELLERLGVKPGDRVSLEEGQGGLLLRAAPLPTAVPTAEGARSGQPGEGVGDALARKNLETPMHS VKGVGPKLSALLARRGIACVEDALYLLPNRYEDRRELRPIAALRPGFNELFSGRVLSAESVTSRGGRRFFEALLADDSAT VTLKWFNCNPTFMKRVWKQGRRALVTGEVSRFASQLEVHHPDVEWLAEGSEPRDLLSADPLNFGGIIPVYPLTEGLSQKV MRRVMREVVERFIPFVRELVPPELLERLGLPGLRHSLGHLHTPPVDERLDDLNGGCSAAHRAIAFDEFFFWELGLALKRC GVTLEEGIAFQVNHLYTKPLVRMLPFQLTRAQRRVLSEIKQDMMAPHPMHRLVQGDVGSGKTLVALMAALVAVENGYQVA IMAPTEILAEQHWHTIHRWCADLGIATVLITAGMRGREKSDALGRVADGSARIVIGTHAVIQEKVEFARLGLGIIDEQHR FGVLQRAILRKKGKGCNPDILVMTATPIPRTLAMTLFGDLSLSVIDELPPGRTPVETRVTPESQRVRVYDTIRREVGQGR QAYVVYPLVEENERSELKAAAQMAEQLGKEIFPDLRVGLLHGRMNPQEKESVMASFKARELDILVSTTVIEVGIDVPNAT VMVIEHAERFGLSQLHQLRGRVGRGAARSRCILMTNGRPSEDGERRLKVMEATNDGFRIAEADLEIRGPGDFLGTRQSGM PDFRVANILRDGALLEQARQAAFGLLEQDPGLASSGNAPLRDELLRRWGQRLELGAIG >Mature_777_residues PILTLSADSCLTIPPELLERLGVKPGDRVSLEEGQGGLLLRAAPLPTAVPTAEGARSGQPGEGVGDALARKNLETPMHSV KGVGPKLSALLARRGIACVEDALYLLPNRYEDRRELRPIAALRPGFNELFSGRVLSAESVTSRGGRRFFEALLADDSATV TLKWFNCNPTFMKRVWKQGRRALVTGEVSRFASQLEVHHPDVEWLAEGSEPRDLLSADPLNFGGIIPVYPLTEGLSQKVM RRVMREVVERFIPFVRELVPPELLERLGLPGLRHSLGHLHTPPVDERLDDLNGGCSAAHRAIAFDEFFFWELGLALKRCG VTLEEGIAFQVNHLYTKPLVRMLPFQLTRAQRRVLSEIKQDMMAPHPMHRLVQGDVGSGKTLVALMAALVAVENGYQVAI MAPTEILAEQHWHTIHRWCADLGIATVLITAGMRGREKSDALGRVADGSARIVIGTHAVIQEKVEFARLGLGIIDEQHRF GVLQRAILRKKGKGCNPDILVMTATPIPRTLAMTLFGDLSLSVIDELPPGRTPVETRVTPESQRVRVYDTIRREVGQGRQ AYVVYPLVEENERSELKAAAQMAEQLGKEIFPDLRVGLLHGRMNPQEKESVMASFKARELDILVSTTVIEVGIDVPNATV MVIEHAERFGLSQLHQLRGRVGRGAARSRCILMTNGRPSEDGERRLKVMEATNDGFRIAEADLEIRGPGDFLGTRQSGMP DFRVANILRDGALLEQARQAAFGLLEQDPGLASSGNAPLRDELLRRWGQRLELGAIG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=696, Percent_Identity=45.2586206896552, Blast_Score=524, Evalue=1e-150, Organism=Escherichia coli, GI1787357, Length=400, Percent_Identity=41, Blast_Score=276, Evalue=5e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 85776; Mature: 85645
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILTLSADSCLTIPPELLERLGVKPGDRVSLEEGQGGLLLRAAPLPTAVPTAEGARSGQ CCEEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCC PGEGVGDALARKNLETPMHSVKGVGPKLSALLARRGIACVEDALYLLPNRYEDRRELRPI CCCCHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCH AALRPGFNELFSGRVLSAESVTSRGGRRFFEALLADDSATVTLKWFNCNPTFMKRVWKQG HHHCCCHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCC RRALVTGEVSRFASQLEVHHPDVEWLAEGSEPRDLLSADPLNFGGIIPVYPLTEGLSQKV CEEEEHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHH MRRVMREVVERFIPFVRELVPPELLERLGLPGLRHSLGHLHTPPVDERLDDLNGGCSAAH HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHH RAIAFDEFFFWELGLALKRCGVTLEEGIAFQVNHLYTKPLVRMLPFQLTRAQRRVLSEIK HHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDMMAPHPMHRLVQGDVGSGKTLVALMAALVAVENGYQVAIMAPTEILAEQHWHTIHRWC HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH ADLGIATVLITAGMRGREKSDALGRVADGSARIVIGTHAVIQEKVEFARLGLGIIDEQHR HHHHHHHHHHHCCCCCCCHHHHHCEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHH FGVLQRAILRKKGKGCNPDILVMTATPIPRTLAMTLFGDLSLSVIDELPPGRTPVETRVT HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC PESQRVRVYDTIRREVGQGRQAYVVYPLVEENERSELKAAAQMAEQLGKEIFPDLRVGLL CCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH HGRMNPQEKESVMASFKARELDILVSTTVIEVGIDVPNATVMVIEHAERFGLSQLHQLRG HCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCEEEEEECHHHCCHHHHHHHHH RVGRGAARSRCILMTNGRPSEDGERRLKVMEATNDGFRIAEADLEIRGPGDFLGTRQSGM HHCCCCCCCEEEEEECCCCCCCHHHHEEHEEECCCCCEEEECCEEEECCCCCCCCCCCCC PDFRVANILRDGALLEQARQAAFGLLEQDPGLASSGNAPLRDELLRRWGQRLELGAIG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PILTLSADSCLTIPPELLERLGVKPGDRVSLEEGQGGLLLRAAPLPTAVPTAEGARSGQ CEEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCC PGEGVGDALARKNLETPMHSVKGVGPKLSALLARRGIACVEDALYLLPNRYEDRRELRPI CCCCHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCH AALRPGFNELFSGRVLSAESVTSRGGRRFFEALLADDSATVTLKWFNCNPTFMKRVWKQG HHHCCCHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCC RRALVTGEVSRFASQLEVHHPDVEWLAEGSEPRDLLSADPLNFGGIIPVYPLTEGLSQKV CEEEEHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHH MRRVMREVVERFIPFVRELVPPELLERLGLPGLRHSLGHLHTPPVDERLDDLNGGCSAAH HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHH RAIAFDEFFFWELGLALKRCGVTLEEGIAFQVNHLYTKPLVRMLPFQLTRAQRRVLSEIK HHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDMMAPHPMHRLVQGDVGSGKTLVALMAALVAVENGYQVAIMAPTEILAEQHWHTIHRWC HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH ADLGIATVLITAGMRGREKSDALGRVADGSARIVIGTHAVIQEKVEFARLGLGIIDEQHR HHHHHHHHHHHCCCCCCCHHHHHCEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHH FGVLQRAILRKKGKGCNPDILVMTATPIPRTLAMTLFGDLSLSVIDELPPGRTPVETRVT HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC PESQRVRVYDTIRREVGQGRQAYVVYPLVEENERSELKAAAQMAEQLGKEIFPDLRVGLL CCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH HGRMNPQEKESVMASFKARELDILVSTTVIEVGIDVPNATVMVIEHAERFGLSQLHQLRG HCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCEEEEEECHHHCCHHHHHHHHH RVGRGAARSRCILMTNGRPSEDGERRLKVMEATNDGFRIAEADLEIRGPGDFLGTRQSGM HHCCCCCCCEEEEEECCCCCCCHHHHEEHEEECCCCCEEEECCEEEECCCCCCCCCCCCC PDFRVANILRDGALLEQARQAAFGLLEQDPGLASSGNAPLRDELLRRWGQRLELGAIG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]