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The map label for this gene is gfcE [H]

Identifier: 118580888

GI number: 118580888

Start: 2678810

End: 2679661

Strand: Reverse

Name: gfcE [H]

Synonym: Ppro_2475

Alternate gene names: 118580888

Gene position: 2679661-2678810 (Counterclockwise)

Preceding gene: 118580889

Following gene: 118580887

Centisome position: 66.86

GC content: 57.28

Gene sequence:

>852_bases
ATGAGGCTGATACCGCTGTTTCTGATGCTGCTGCTGGCGCTTCCGCTCTCCTGCCACGCCGCGGATTACGTGATCGGCGA
GGGGGATGGACTGGATGTTGCTGTCTGGGGCGTCAAGGAACTGACCTTTTCGGTCAGGGTCCGTCCGGATGGTAAGATCA
CCGTGCCCGGCCTGGGTGACCTTTCCGCCAGCGGGCAGACACCGACCGAGCTGCAGAAAAGCCTGACGGAAAAGCTTAAG
GATCTGGTGAAGAACCCGATAGTAACCGTAACCGTGCGCGAGATAACCAACAGCAAGGTGTATATTTTCGGGAGTGGAAT
AAATTCAGGGGTATACGATCTCAACCGGCGCACCTCACTCTTGCAGCTCCTCTGCTCCATCGGCAGCCAGGCCTCCGTGG
ATTCCACGTCAGCGGCGGGTTCAGCGGGTGGAGCCACCTCGAAAGTAGCCGATTACAAGCGCGCCTATGTGCTGCGTAAC
GGCAAAAAGATCAAGGAAAACTTCTACCGCCTGTTCATCGACGGCGACACCTCTGAAGATGTGATCATCGAATCCAATGA
CTCCATTTTCGTTCCCCAGCTCCTGGACCGGAATATTTATGTTCTCGGCGCGGTGGCAACGCCGCGCGCCCTCGAATACC
GCGAGGGGATCAAGGTGATGGAGGCGATTCTGGAGGCGGGTGGCTTCACCAAGTTCGCCGATCAGAACGACGTCATCATC
CGCAGGAAAGAGGGGACAAAGGATGTGGCCCTCGAGGTGAAGGCAAAGAAACTGATCAAGGATGGCGACCTGACCCAGAA
CGTGCCTCTTCGGCCGGGAGACTACGTCGTGGTCAGGGAGAGCATCTTCTGA

Upstream 100 bases:

>100_bases
CTCGACACGCTGATCTTCCTGGAAACCATCAAGGTCGTCCTGTTCGGACGTGGCGGCCGCTAAACCACAGAAGCTTTTTT
CCGACGAAAGGGGAAACCAC

Downstream 100 bases:

>100_bases
TCCGGTTGAACGTTACCAAACCAGTACAGCTGCTACGCATGCGGGGTGTCGATGTCGGACTCGGAATTTGATTACAAGAA
GTACCTGGAGCTGATTGTCA

Product: polysaccharide export protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRLIPLFLMLLLALPLSCHAADYVIGEGDGLDVAVWGVKELTFSVRVRPDGKITVPGLGDLSASGQTPTELQKSLTEKLK
DLVKNPIVTVTVREITNSKVYIFGSGINSGVYDLNRRTSLLQLLCSIGSQASVDSTSAAGSAGGATSKVADYKRAYVLRN
GKKIKENFYRLFIDGDTSEDVIIESNDSIFVPQLLDRNIYVLGAVATPRALEYREGIKVMEAILEAGGFTKFADQNDVII
RRKEGTKDVALEVKAKKLIKDGDLTQNVPLRPGDYVVVRESIF

Sequences:

>Translated_283_residues
MRLIPLFLMLLLALPLSCHAADYVIGEGDGLDVAVWGVKELTFSVRVRPDGKITVPGLGDLSASGQTPTELQKSLTEKLK
DLVKNPIVTVTVREITNSKVYIFGSGINSGVYDLNRRTSLLQLLCSIGSQASVDSTSAAGSAGGATSKVADYKRAYVLRN
GKKIKENFYRLFIDGDTSEDVIIESNDSIFVPQLLDRNIYVLGAVATPRALEYREGIKVMEAILEAGGFTKFADQNDVII
RRKEGTKDVALEVKAKKLIKDGDLTQNVPLRPGDYVVVRESIF
>Mature_283_residues
MRLIPLFLMLLLALPLSCHAADYVIGEGDGLDVAVWGVKELTFSVRVRPDGKITVPGLGDLSASGQTPTELQKSLTEKLK
DLVKNPIVTVTVREITNSKVYIFGSGINSGVYDLNRRTSLLQLLCSIGSQASVDSTSAAGSAGGATSKVADYKRAYVLRN
GKKIKENFYRLFIDGDTSEDVIIESNDSIFVPQLLDRNIYVLGAVATPRALEYREGIKVMEAILEAGGFTKFADQNDVII
RRKEGTKDVALEVKAKKLIKDGDLTQNVPLRPGDYVVVRESIF

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=239, Percent_Identity=28.4518828451883, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788376, Length=219, Percent_Identity=25.5707762557078, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 30855; Mature: 30855

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIPLFLMLLLALPLSCHAADYVIGEGDGLDVAVWGVKELTFSVRVRPDGKITVPGLGD
CCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEEEECCCCEEECCCCCC
LSASGQTPTELQKSLTEKLKDLVKNPIVTVTVREITNSKVYIFGSGINSGVYDLNRRTSL
CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHH
LQLLCSIGSQASVDSTSAAGSAGGATSKVADYKRAYVLRNGKKIKENFYRLFIDGDTSED
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCHHCCCEEEEEECCCCCCC
VIIESNDSIFVPQLLDRNIYVLGAVATPRALEYREGIKVMEAILEAGGFTKFADQNDVII
EEEECCCCEECHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
RRKEGTKDVALEVKAKKLIKDGDLTQNVPLRPGDYVVVRESIF
EECCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MRLIPLFLMLLLALPLSCHAADYVIGEGDGLDVAVWGVKELTFSVRVRPDGKITVPGLGD
CCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEEEECCCCEEECCCCCC
LSASGQTPTELQKSLTEKLKDLVKNPIVTVTVREITNSKVYIFGSGINSGVYDLNRRTSL
CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHH
LQLLCSIGSQASVDSTSAAGSAGGATSKVADYKRAYVLRNGKKIKENFYRLFIDGDTSED
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCHHCCCEEEEEECCCCCCC
VIIESNDSIFVPQLLDRNIYVLGAVATPRALEYREGIKVMEAILEAGGFTKFADQNDVII
EEEECCCCEECHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
RRKEGTKDVALEVKAKKLIKDGDLTQNVPLRPGDYVVVRESIF
EECCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]