| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580832
Identifier: 118580832
GI number: 118580832
Start: 2617201
End: 2618148
Strand: Reverse
Name: 118580832
Synonym: Ppro_2419
Alternate gene names: NA
Gene position: 2618148-2617201 (Counterclockwise)
Preceding gene: 118580833
Following gene: 118580831
Centisome position: 65.32
GC content: 63.19
Gene sequence:
>948_bases ATGACCATGCGCTTTTCCGGTACGCTTTTCAGAAGAAAATCACTGGGGGTCGAGATCGGTCCGGCCGGGGCGGCCTTTGC CCTGCTGGGGGGGAGCTCAACGAATCCCTGCCTGGAGCGGGTTGCTTTTCGCCCGCTGGCGCCCGGCGCGTTGCGGCCCT CCCTGCGCGAAGCCAATATCACCGATCCCCAGGCCTTCTGCGACTGCCTGAGGGAGGCTCACTCGCAGCTGTTGCAGGGG GGTACCATGCTGTCGGTTACCCTGCCCGATGCCGTGGGGCGCGTCCTTTTGATGGATGTGGAGGGGCGCTTCAAGAACCG AGCCGAGGGTTTGGACATTATCCGCTGGAAGCTTAAGAAGAGCATGCCCCTGGACGTGGGCGACACCCATCTGGATTACC AGAAACTGCGGGTGAGCGAGAACAACGACATGCTCCTGCTGGTGAGCCTGGTTTCCCGTTCCGTCATCGGCCAGTACGAG GATCTGATCGCGGCTGCGGGTCTGGTCCCGGCCCGCATCGATCTGAACCTGTTCAACCTCTACCGCACCTTCGAGAGGCG ACTGTCCCTTCAGGATGAGTGCACGCTGATATCCTTCTACGGCAACTCCCTGTCGATCATGATCATGGCCGATGGGGTTC CCGAGTTCATACGGGTCAAGGAGCTTCCCGGCGTGTCGCCCCATGACGGCCGTGTCTACCGGGAGATCTGCAACTCGCTT CTGGCCTACCGGGAGCGCTTCCCGGAGCGCATACCCCAGGGAGTGACCTGCATCGCCGCGCCCGAGGCCGCGCCCGGTTT CCGCGACATGGTCAGCGAGGCCCTTGCCGGAGAAACGCTGCTGCTGGAAGCCAAGTCGGCTGTCACCCCACTGGTGGACG CTCCGGCGGATCAGGCGACACTTTTTCCCTTTACGGCCGCCATCGGCGCCGCCCTGAGGAGTCTGTGA
Upstream 100 bases:
>100_bases AGAGATCAACCGTGTCACCTTCGTGGAGTAACGGACAGGGGGGCAGGCAGCGTTTTCAGCGAACTTTGTTTTGTGTTTTC CGTCCGCATTACAGGATGAA
Downstream 100 bases:
>100_bases TGCGTTTTACCATCAATCTTGCCACCAGGACGTACCTGGACCATGGCCTGATCAACCGTATCCTGGGAGGGGCGCTGCTG TTCCTGCTGCTGCTGTCGGC
Product: putative type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilM; Type II Secretion System ATPase PulM
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTMRFSGTLFRRKSLGVEIGPAGAAFALLGGSSTNPCLERVAFRPLAPGALRPSLREANITDPQAFCDCLREAHSQLLQG GTMLSVTLPDAVGRVLLMDVEGRFKNRAEGLDIIRWKLKKSMPLDVGDTHLDYQKLRVSENNDMLLLVSLVSRSVIGQYE DLIAAAGLVPARIDLNLFNLYRTFERRLSLQDECTLISFYGNSLSIMIMADGVPEFIRVKELPGVSPHDGRVYREICNSL LAYRERFPERIPQGVTCIAAPEAAPGFRDMVSEALAGETLLLEAKSAVTPLVDAPADQATLFPFTAAIGAALRSL
Sequences:
>Translated_315_residues MTMRFSGTLFRRKSLGVEIGPAGAAFALLGGSSTNPCLERVAFRPLAPGALRPSLREANITDPQAFCDCLREAHSQLLQG GTMLSVTLPDAVGRVLLMDVEGRFKNRAEGLDIIRWKLKKSMPLDVGDTHLDYQKLRVSENNDMLLLVSLVSRSVIGQYE DLIAAAGLVPARIDLNLFNLYRTFERRLSLQDECTLISFYGNSLSIMIMADGVPEFIRVKELPGVSPHDGRVYREICNSL LAYRERFPERIPQGVTCIAAPEAAPGFRDMVSEALAGETLLLEAKSAVTPLVDAPADQATLFPFTAAIGAALRSL >Mature_314_residues TMRFSGTLFRRKSLGVEIGPAGAAFALLGGSSTNPCLERVAFRPLAPGALRPSLREANITDPQAFCDCLREAHSQLLQGG TMLSVTLPDAVGRVLLMDVEGRFKNRAEGLDIIRWKLKKSMPLDVGDTHLDYQKLRVSENNDMLLLVSLVSRSVIGQYED LIAAAGLVPARIDLNLFNLYRTFERRLSLQDECTLISFYGNSLSIMIMADGVPEFIRVKELPGVSPHDGRVYREICNSLL AYRERFPERIPQGVTCIAAPEAAPGFRDMVSEALAGETLLLEAKSAVTPLVDAPADQATLFPFTAAIGAALRSL
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34409; Mature: 34278
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRFSGTLFRRKSLGVEIGPAGAAFALLGGSSTNPCLERVAFRPLAPGALRPSLREANI CCEEECCCHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC TDPQAFCDCLREAHSQLLQGGTMLSVTLPDAVGRVLLMDVEGRFKNRAEGLDIIRWKLKK CCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCEEEEEECCCCCCCCCCCHHHHHHHHHC SMPLDVGDTHLDYQKLRVSENNDMLLLVSLVSRSVIGQYEDLIAAAGLVPARIDLNLFNL CCCCCCCCCCCCHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH YRTFERRLSLQDECTLISFYGNSLSIMIMADGVPEFIRVKELPGVSPHDGRVYREICNSL HHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHH LAYRERFPERIPQGVTCIAAPEAAPGFRDMVSEALAGETLLLEAKSAVTPLVDAPADQAT HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCC LFPFTAAIGAALRSL HHHHHHHHHHHHHCC >Mature Secondary Structure TMRFSGTLFRRKSLGVEIGPAGAAFALLGGSSTNPCLERVAFRPLAPGALRPSLREANI CEEECCCHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC TDPQAFCDCLREAHSQLLQGGTMLSVTLPDAVGRVLLMDVEGRFKNRAEGLDIIRWKLKK CCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCEEEEEECCCCCCCCCCCHHHHHHHHHC SMPLDVGDTHLDYQKLRVSENNDMLLLVSLVSRSVIGQYEDLIAAAGLVPARIDLNLFNL CCCCCCCCCCCCHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH YRTFERRLSLQDECTLISFYGNSLSIMIMADGVPEFIRVKELPGVSPHDGRVYREICNSL HHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHH LAYRERFPERIPQGVTCIAAPEAAPGFRDMVSEALAGETLLLEAKSAVTPLVDAPADQAT HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCC LFPFTAAIGAALRSL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA