| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118580794
Identifier: 118580794
GI number: 118580794
Start: 2582360
End: 2584861
Strand: Direct
Name: 118580794
Synonym: Ppro_2380
Alternate gene names: NA
Gene position: 2582360-2584861 (Clockwise)
Preceding gene: 118580791
Following gene: 118580795
Centisome position: 64.43
GC content: 57.99
Gene sequence:
>2502_bases ATGCTGCCGCTTCCGCTGCGAAAAACCACAAATCGTTGCCAAACAGAACGCCGAAAAATGTCCTTTAGAAACGTTTTCCA AGGGACATTTCTAAAGGACAAAAAAAGTCTAAGGGACAAATTTCAAAACGCTGAAATTACGAATGGTTACCCAATGAACT ACGATGAAGAGCATTATATCGATGTCAAAACTTTGGCAACAGCATGGCTCCCAGCCGATGCAACGACAGATGATCTTGTC AAAAAAATGGCATTAATAAAAAAAGCTATTCAAAGGGGCAAATTCGAATCCGCACGCCAGGTCACGGCTACCCAGGAGGA TGGCCGCCCTTTAGGCCGTGGCGGCAAAATCTGGCAGATCAACATTGCCGACCCCGCCGTGCCTGTGGCCATCCGAATCA AGTGGTTCGACATCATGCTTGCAGTGCCGGAACAGCCGTCCCTGCCCGCCGTAGCCGCCGCGAACCTTCCTGTCGTTGCG CCCAAGTCCTTGACCGTTCCGGACACGCTGGAGCTGAACGGCAAACAGGAAAGGATCATCACCGCCCGCTTCCAGCTCCT GCTGATGCTCGAAAACAGAGGGCCGGGCAAGAAGGTCATGCAGGCCGCCCGCGAGATAATCGACGCCATCAACGACTGCG CTGACAAACGACTGGTCAACATCGCCAAGGTGGCCAATGACCGCAAGGGGACAGAGCGCGGCCTGTCGCTGCGCACTCTG ATGCGCTGGTGGAATACCTACCAGAAAACCGGCAGGAAACAGAACGCCCTTGCGCCGGTCAAGGGGGATCGGATGCCGCG CAACGATCTTGTTGAATGGCTGCGGGATTACGCGCCCGGTACCGCCGAACATACGGCCTTGCCGGTCTGCGTTCCAAGCT GGGTGCCGTACTTCCTGGACGAATACCGCCGCCCGCAAAAACCTTCCATGCAGGAGGCGTGGCGACAGATCAGTCGCACC ATGCCGCCGGACATCGCGCGCCCGTCATACGATCAAGTCCGCCGCGTCATGAAGAAAGTGCCGGTCGTCCATAGCGAGAA GGGCCGCCGGACCGGGGCCGAATACAACAGCCTTCTGGGATACGTGGAGCGTGACGCCTCCGGTTTCGCCCCCATGTCCA TCTGCCAGATTGACGGCCACAGCTTCAAGGCCTACGTGGCGCACCCCGTCACCGGGGCGCACTTCCACCCGGAAATCTGC GGCGTGATCTGCATGACGACAAAGGTTCTCGCCGGTTGGTCCGCCGGATTGGCCGAGAGCAACCAAACCGTTGGCGATGC CTACCGCCACGCCTGCACCGTCAACGAGAACAAACCCTGGGGCGGCGTTCCCGCCATCCTGGAAGCAGACCGGGGGGCCG GGAACATGGCCAAGGTGAACAGTGATGACTATATCGGGCTGTTCGCGCGGATCGGCACCACCTTCATCCCGCCGAAGCGA GGCGGCAATCCCCAGGGCCACGGGGCAATCGAACGGAGCAATCAAACCATCTGGATACGGGCGGCCAAGAGCCTTGTAAC CTGCACCACAAAGGACATGGATCGGGGCGCCCGGCGCAAGGTGTACGACCGCTTGGAGGCGGACCTGAAAGAGGTCAAAA AAGCCGGAAAACTGGGGATGGTTCCCAAAACCTCGGATTTGCTCATGTCCTGGCCCGAATTCCTGGAATTCCTGGACCGG GTTGCCCTGGAGTACAACAGCACCCCGCACAAGGCCTTGCAGAAGATCGTTGCCTCGCTGCCGGACAACCCGGACGGCCC GGCGGTCAGCCGTCACATGTCCCCTTTCGAATGCTGGGCTGATTACGTGGCGCAAGGGTTTGAGCCGGTCCATCCTGATG ACGTGATGCTGCACAAGCTCTTTGCTCCTCATGCCACCGTTACCGTCAAGCGGCAAAAGTTCACCCTGAACGGCAACAGC TATCACTCCCACGAACTGGACGAATACCACGGCCAGCAGGTTGTTGTGTCTTACGACATCAACAATGCGCACACCGTCAC CGTGTTCGATGCTGACGAAAACTTCATCTGCGAGGCGCGGTGGAACGGCAACCGGGTTCATGCCCGTCCGGTGCCGGAAG TGGAACAGGCAACCATGCAGCGACACAGCCGCCGCGTGAAGAACAAGGAAAAGCAGCTCGACATGATGAATGCCGAACTC GACCGAAAAACCCTGGAAATCAGGCCGCTGGTCATGGAACTAGACCAGGCAACCATCGATTACGAGGCACGGGAAGAGCA GAAACGACAGGCGCAGTTGGCCGCCCCCAAGTACTTCAAAGACGAGCATGAGTTTTATAACGATGTCAGGGAACGGCAGC GGGAGGGGCTGGCCTCGGCATACGAAACACAGTGGGCCGATGACAAAGACGCCTCATACACAGGCCGGGGGCATGTAGGG CTGTTCAAGTCAGATCGGTATTGCGAAGGGAGGTTTAAACCTGAAAACAAGCTGCAACCAATGGAAAAAGCCGCCGGTGC TACCAACACCAGCGGCCTTTGA
Upstream 100 bases:
>100_bases AAGTCGCCGTGTCATGGGCTACATCGAAGAACTCATCAAATCGGAGAAGAGCCATGTTGAAGCCGCACACCGTTAAGAAG CTGGTAACGATGACGGAAGA
Downstream 100 bases:
>100_bases GACACCCCGTGCGATGGGGACATTACCAGGAGGAAAAATACCATGAGACACGTAATGGCAACAACCAAAAACATGCGCAA GTTCATGCAAGCCGTTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Bacteriophage Transposase; Transposase A; Transposase-Like Mu; Bacteriophage Transposase A Protein; Integrase Catalytic Subunit; Transposase/Recombinase; Phage Transposition Protein
Number of amino acids: Translated: 833; Mature: 833
Protein sequence:
>833_residues MLPLPLRKTTNRCQTERRKMSFRNVFQGTFLKDKKSLRDKFQNAEITNGYPMNYDEEHYIDVKTLATAWLPADATTDDLV KKMALIKKAIQRGKFESARQVTATQEDGRPLGRGGKIWQINIADPAVPVAIRIKWFDIMLAVPEQPSLPAVAAANLPVVA PKSLTVPDTLELNGKQERIITARFQLLLMLENRGPGKKVMQAAREIIDAINDCADKRLVNIAKVANDRKGTERGLSLRTL MRWWNTYQKTGRKQNALAPVKGDRMPRNDLVEWLRDYAPGTAEHTALPVCVPSWVPYFLDEYRRPQKPSMQEAWRQISRT MPPDIARPSYDQVRRVMKKVPVVHSEKGRRTGAEYNSLLGYVERDASGFAPMSICQIDGHSFKAYVAHPVTGAHFHPEIC GVICMTTKVLAGWSAGLAESNQTVGDAYRHACTVNENKPWGGVPAILEADRGAGNMAKVNSDDYIGLFARIGTTFIPPKR GGNPQGHGAIERSNQTIWIRAAKSLVTCTTKDMDRGARRKVYDRLEADLKEVKKAGKLGMVPKTSDLLMSWPEFLEFLDR VALEYNSTPHKALQKIVASLPDNPDGPAVSRHMSPFECWADYVAQGFEPVHPDDVMLHKLFAPHATVTVKRQKFTLNGNS YHSHELDEYHGQQVVVSYDINNAHTVTVFDADENFICEARWNGNRVHARPVPEVEQATMQRHSRRVKNKEKQLDMMNAEL DRKTLEIRPLVMELDQATIDYEAREEQKRQAQLAAPKYFKDEHEFYNDVRERQREGLASAYETQWADDKDASYTGRGHVG LFKSDRYCEGRFKPENKLQPMEKAAGATNTSGL
Sequences:
>Translated_833_residues MLPLPLRKTTNRCQTERRKMSFRNVFQGTFLKDKKSLRDKFQNAEITNGYPMNYDEEHYIDVKTLATAWLPADATTDDLV KKMALIKKAIQRGKFESARQVTATQEDGRPLGRGGKIWQINIADPAVPVAIRIKWFDIMLAVPEQPSLPAVAAANLPVVA PKSLTVPDTLELNGKQERIITARFQLLLMLENRGPGKKVMQAAREIIDAINDCADKRLVNIAKVANDRKGTERGLSLRTL MRWWNTYQKTGRKQNALAPVKGDRMPRNDLVEWLRDYAPGTAEHTALPVCVPSWVPYFLDEYRRPQKPSMQEAWRQISRT MPPDIARPSYDQVRRVMKKVPVVHSEKGRRTGAEYNSLLGYVERDASGFAPMSICQIDGHSFKAYVAHPVTGAHFHPEIC GVICMTTKVLAGWSAGLAESNQTVGDAYRHACTVNENKPWGGVPAILEADRGAGNMAKVNSDDYIGLFARIGTTFIPPKR GGNPQGHGAIERSNQTIWIRAAKSLVTCTTKDMDRGARRKVYDRLEADLKEVKKAGKLGMVPKTSDLLMSWPEFLEFLDR VALEYNSTPHKALQKIVASLPDNPDGPAVSRHMSPFECWADYVAQGFEPVHPDDVMLHKLFAPHATVTVKRQKFTLNGNS YHSHELDEYHGQQVVVSYDINNAHTVTVFDADENFICEARWNGNRVHARPVPEVEQATMQRHSRRVKNKEKQLDMMNAEL DRKTLEIRPLVMELDQATIDYEAREEQKRQAQLAAPKYFKDEHEFYNDVRERQREGLASAYETQWADDKDASYTGRGHVG LFKSDRYCEGRFKPENKLQPMEKAAGATNTSGL >Mature_833_residues MLPLPLRKTTNRCQTERRKMSFRNVFQGTFLKDKKSLRDKFQNAEITNGYPMNYDEEHYIDVKTLATAWLPADATTDDLV KKMALIKKAIQRGKFESARQVTATQEDGRPLGRGGKIWQINIADPAVPVAIRIKWFDIMLAVPEQPSLPAVAAANLPVVA PKSLTVPDTLELNGKQERIITARFQLLLMLENRGPGKKVMQAAREIIDAINDCADKRLVNIAKVANDRKGTERGLSLRTL MRWWNTYQKTGRKQNALAPVKGDRMPRNDLVEWLRDYAPGTAEHTALPVCVPSWVPYFLDEYRRPQKPSMQEAWRQISRT MPPDIARPSYDQVRRVMKKVPVVHSEKGRRTGAEYNSLLGYVERDASGFAPMSICQIDGHSFKAYVAHPVTGAHFHPEIC GVICMTTKVLAGWSAGLAESNQTVGDAYRHACTVNENKPWGGVPAILEADRGAGNMAKVNSDDYIGLFARIGTTFIPPKR GGNPQGHGAIERSNQTIWIRAAKSLVTCTTKDMDRGARRKVYDRLEADLKEVKKAGKLGMVPKTSDLLMSWPEFLEFLDR VALEYNSTPHKALQKIVASLPDNPDGPAVSRHMSPFECWADYVAQGFEPVHPDDVMLHKLFAPHATVTVKRQKFTLNGNS YHSHELDEYHGQQVVVSYDINNAHTVTVFDADENFICEARWNGNRVHARPVPEVEQATMQRHSRRVKNKEKQLDMMNAEL DRKTLEIRPLVMELDQATIDYEAREEQKRQAQLAAPKYFKDEHEFYNDVRERQREGLASAYETQWADDKDASYTGRGHVG LFKSDRYCEGRFKPENKLQPMEKAAGATNTSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94204; Mature: 94204
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLPLRKTTNRCQTERRKMSFRNVFQGTFLKDKKSLRDKFQNAEITNGYPMNYDEEHYI CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE DVKTLATAWLPADATTDDLVKKMALIKKAIQRGKFESARQVTATQEDGRPLGRGGKIWQI EHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEE NIADPAVPVAIRIKWFDIMLAVPEQPSLPAVAAANLPVVAPKSLTVPDTLELNGKQERII ECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEECCCCEECCCCCCCCCCEECCCCHHHHH TARFQLLLMLENRGPGKKVMQAAREIIDAINDCADKRLVNIAKVANDRKGTERGLSLRTL HHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHH MRWWNTYQKTGRKQNALAPVKGDRMPRNDLVEWLRDYAPGTAEHTALPVCVPSWVPYFLD HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHH EYRRPQKPSMQEAWRQISRTMPPDIARPSYDQVRRVMKKVPVVHSEKGRRTGAEYNSLLG HHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH YVERDASGFAPMSICQIDGHSFKAYVAHPVTGAHFHPEICGVICMTTKVLAGWSAGLAES HHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC NQTVGDAYRHACTVNENKPWGGVPAILEADRGAGNMAKVNSDDYIGLFARIGTTFIPPKR CCHHHHHHHHEEECCCCCCCCCCCHHEECCCCCCCCEEECCCCHHHHHHHHCCCCCCCCC GGNPQGHGAIERSNQTIWIRAAKSLVTCTTKDMDRGARRKVYDRLEADLKEVKKAGKLGM CCCCCCCCCEECCCCEEEEEECCCHHEECCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC VPKTSDLLMSWPEFLEFLDRVALEYNSTPHKALQKIVASLPDNPDGPAVSRHMSPFECWA CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH DYVAQGFEPVHPDDVMLHKLFAPHATVTVKRQKFTLNGNSYHSHELDEYHGQQVVVSYDI HHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCEEEEEEEC NNAHTVTVFDADENFICEARWNGNRVHARPVPEVEQATMQRHSRRVKNKEKQLDMMNAEL CCCEEEEEEECCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRKTLEIRPLVMELDQATIDYEAREEQKRQAQLAAPKYFKDEHEFYNDVRERQREGLASA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH YETQWADDKDASYTGRGHVGLFKSDRYCEGRFKPENKLQPMEKAAGATNTSGL HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCHHHHHCCCCCCCCC >Mature Secondary Structure MLPLPLRKTTNRCQTERRKMSFRNVFQGTFLKDKKSLRDKFQNAEITNGYPMNYDEEHYI CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE DVKTLATAWLPADATTDDLVKKMALIKKAIQRGKFESARQVTATQEDGRPLGRGGKIWQI EHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEE NIADPAVPVAIRIKWFDIMLAVPEQPSLPAVAAANLPVVAPKSLTVPDTLELNGKQERII ECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEECCCCEECCCCCCCCCCEECCCCHHHHH TARFQLLLMLENRGPGKKVMQAAREIIDAINDCADKRLVNIAKVANDRKGTERGLSLRTL HHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHH MRWWNTYQKTGRKQNALAPVKGDRMPRNDLVEWLRDYAPGTAEHTALPVCVPSWVPYFLD HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHH EYRRPQKPSMQEAWRQISRTMPPDIARPSYDQVRRVMKKVPVVHSEKGRRTGAEYNSLLG HHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH YVERDASGFAPMSICQIDGHSFKAYVAHPVTGAHFHPEICGVICMTTKVLAGWSAGLAES HHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC NQTVGDAYRHACTVNENKPWGGVPAILEADRGAGNMAKVNSDDYIGLFARIGTTFIPPKR CCHHHHHHHHEEECCCCCCCCCCCHHEECCCCCCCCEEECCCCHHHHHHHHCCCCCCCCC GGNPQGHGAIERSNQTIWIRAAKSLVTCTTKDMDRGARRKVYDRLEADLKEVKKAGKLGM CCCCCCCCCEECCCCEEEEEECCCHHEECCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC VPKTSDLLMSWPEFLEFLDRVALEYNSTPHKALQKIVASLPDNPDGPAVSRHMSPFECWA CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH DYVAQGFEPVHPDDVMLHKLFAPHATVTVKRQKFTLNGNSYHSHELDEYHGQQVVVSYDI HHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCEEEEEEEC NNAHTVTVFDADENFICEARWNGNRVHARPVPEVEQATMQRHSRRVKNKEKQLDMMNAEL CCCEEEEEEECCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRKTLEIRPLVMELDQATIDYEAREEQKRQAQLAAPKYFKDEHEFYNDVRERQREGLASA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH YETQWADDKDASYTGRGHVGLFKSDRYCEGRFKPENKLQPMEKAAGATNTSGL HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA