| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is aroL [H]
Identifier: 118580776
GI number: 118580776
Start: 2554546
End: 2555073
Strand: Reverse
Name: aroL [H]
Synonym: Ppro_2361
Alternate gene names: 118580776
Gene position: 2555073-2554546 (Counterclockwise)
Preceding gene: 118580777
Following gene: 118580773
Centisome position: 63.75
GC content: 67.23
Gene sequence:
>528_bases ATGACGACAGAGACCATTTTCATAGTCGGGGCCCGCGCCTCGGGAAAGACGACCATCGGACAGAGCCTGGCGCAGGCGCT GGGTTGCGGGTTTGTTGACACCGATCAGCACATGCTGGAGACGACGTCCCTGACCGTGGCCGAGGTTGTGGAGAAGGAAG GGTGGGAAGGTTTCCGGCGCCGGGAGAGCGAGGCGCTGCGTGCCGTGACCAGGCCCGGAATGGTGGTGGCCACCGGAGGA GGGATGGTACTGTCCGAGGCTAACCGCCAGTTCATGCGTGACAACGGAACGGTGCTCTACCTGTCCGCGCCGGCGTCGGT GCTGGCCGCGCGTCTTGAGGCGAATCCCGAGGAAGCCCAGCGCCCGACGCTCACCGGACGGCCCATCGTGGCAGAGGTGA GCGAGGTCCTGGCAGCCCGGGAGCCGCTCTACCGGAACGCGGCCCATCATGTGCTGGATGCCACGGCAGCGCCCGATCTC GTTGTGGCGCAGGCGCTGGAGGCACTGCGCGAGCCGTCGTCACCCTGA
Upstream 100 bases:
>100_bases AAAAGGTCTTGCGCTGGCCAGCGTTACGGGTGATAGTGTGCAACGGTCGCCCGCCGCACCCAAGGCGGCGGCTTTATTCA GCAATGGAGAGGGGAGTACC
Downstream 100 bases:
>100_bases TTGCAACGATCGCGGAGGGCGGATTCGTCCGCCCTCCAGGCAGTCTCAACTCCCGCCTCGCAACGCCTCCACCGCATTCC CCCCGGCACAGCTCCCTTTT
Product: shikimate kinase II
Products: NA
Alternate protein names: SK 2 [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTTETIFIVGARASGKTTIGQSLAQALGCGFVDTDQHMLETTSLTVAEVVEKEGWEGFRRRESEALRAVTRPGMVVATGG GMVLSEANRQFMRDNGTVLYLSAPASVLAARLEANPEEAQRPTLTGRPIVAEVSEVLAAREPLYRNAAHHVLDATAAPDL VVAQALEALREPSSP
Sequences:
>Translated_175_residues MTTETIFIVGARASGKTTIGQSLAQALGCGFVDTDQHMLETTSLTVAEVVEKEGWEGFRRRESEALRAVTRPGMVVATGG GMVLSEANRQFMRDNGTVLYLSAPASVLAARLEANPEEAQRPTLTGRPIVAEVSEVLAAREPLYRNAAHHVLDATAAPDL VVAQALEALREPSSP >Mature_174_residues TTETIFIVGARASGKTTIGQSLAQALGCGFVDTDQHMLETTSLTVAEVVEKEGWEGFRRRESEALRAVTRPGMVVATGGG MVLSEANRQFMRDNGTVLYLSAPASVLAARLEANPEEAQRPTLTGRPIVAEVSEVLAAREPLYRNAAHHVLDATAAPDLV VAQALEALREPSSP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fifth step. [C]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=170, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=7e-13, Organism=Escherichia coli, GI1786587, Length=167, Percent_Identity=53.8922155688623, Blast_Score=187, Evalue=4e-49, Organism=Escherichia coli, GI87082255, Length=164, Percent_Identity=36.5853658536585, Blast_Score=87, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6320332, Length=182, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 18641; Mature: 18510
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTETIFIVGARASGKTTIGQSLAQALGCGFVDTDQHMLETTSLTVAEVVEKEGWEGFRR CCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH RESEALRAVTRPGMVVATGGGMVLSEANRQFMRDNGTVLYLSAPASVLAARLEANPEEAQ HHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHC RPTLTGRPIVAEVSEVLAAREPLYRNAAHHVLDATAAPDLVVAQALEALREPSSP CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTETIFIVGARASGKTTIGQSLAQALGCGFVDTDQHMLETTSLTVAEVVEKEGWEGFRR CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH RESEALRAVTRPGMVVATGGGMVLSEANRQFMRDNGTVLYLSAPASVLAARLEANPEEAQ HHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHC RPTLTGRPIVAEVSEVLAAREPLYRNAAHHVLDATAAPDLVVAQALEALREPSSP CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA