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The map label for this gene is ydjA [C]

Identifier: 118580769

GI number: 118580769

Start: 2545718

End: 2546290

Strand: Reverse

Name: ydjA [C]

Synonym: Ppro_2354

Alternate gene names: 118580769

Gene position: 2546290-2545718 (Counterclockwise)

Preceding gene: 118580770

Following gene: 118580768

Centisome position: 63.53

GC content: 58.64

Gene sequence:

>573_bases
ATGGACAGTCTGACCACCATCATGAAGCGACGCAGTTCCTGCAGGAAATTCAGCGCAGAAGCGCTGCCCCGGGAGACCAT
CGAGGCGCTGATCAACACAGCGGTCTGGGCCCCCAGCGGTTCCAATAACCAGCCCTGGCGCTTCGTCGTTATTTTCGATA
GGGAACGCCTGAAGCGCCTCTCCGACACCGCCAAGGAAAAGTGGCTGGCCAACATGGAGGACGCCCCCTTTATCCGGCAG
TACGAGAAGTGGATGAATAACCCCGAGTTCAACATCTTCTACAACGCGCCGGCACTGATCGTCATCTACGGCGACAGTAA
AGCCCACTGGCAGGTGTACGACTGCAGCATGGTGGCCCAGAACATAAACCTGCTGGCCGAGGAGCAGGGGCTGGGCTGCT
GCTGGATCGGCTTTGCCCACAACGTACTGGACGAGCCGGAAGTCAAGAAGGAGCTGGGGATGCCGGAGGAGTATGAACTG
GTTGCGCCGCTGATCATCGGCTATCCGGCGGTGAAGCGGGAACAGTCCGAAAACCCGATCAAGCGGAAGCCGGTGGAGAT
CAACTTCCTGTAA

Upstream 100 bases:

>100_bases
TTCATCTCGCCGGGAAGTACGACGAAAGAGCCCTGATGCGCTTTCTCCGGCATCCCCCAACTGCCGTTTCCAGGATAAAC
AACCCCAAGGAGGCAAAGCC

Downstream 100 bases:

>100_bases
CAGGGCGGTCCCGTCAGGGTTGTGGTACGTCTCCCCAGGGTGGATGGACAGGGATGGGGTGCTGATGAACCCCATCCCCA
CCCTGACCCTTGAACCTGAA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDSLTTIMKRRSSCRKFSAEALPRETIEALINTAVWAPSGSNNQPWRFVVIFDRERLKRLSDTAKEKWLANMEDAPFIRQ
YEKWMNNPEFNIFYNAPALIVIYGDSKAHWQVYDCSMVAQNINLLAEEQGLGCCWIGFAHNVLDEPEVKKELGMPEEYEL
VAPLIIGYPAVKREQSENPIKRKPVEINFL

Sequences:

>Translated_190_residues
MDSLTTIMKRRSSCRKFSAEALPRETIEALINTAVWAPSGSNNQPWRFVVIFDRERLKRLSDTAKEKWLANMEDAPFIRQ
YEKWMNNPEFNIFYNAPALIVIYGDSKAHWQVYDCSMVAQNINLLAEEQGLGCCWIGFAHNVLDEPEVKKELGMPEEYEL
VAPLIIGYPAVKREQSENPIKRKPVEINFL
>Mature_190_residues
MDSLTTIMKRRSSCRKFSAEALPRETIEALINTAVWAPSGSNNQPWRFVVIFDRERLKRLSDTAKEKWLANMEDAPFIRQ
YEKWMNNPEFNIFYNAPALIVIYGDSKAHWQVYDCSMVAQNINLLAEEQGLGCCWIGFAHNVLDEPEVKKELGMPEEYEL
VAPLIIGYPAVKREQSENPIKRKPVEINFL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21983; Mature: 21983

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLTTIMKRRSSCRKFSAEALPRETIEALINTAVWAPSGSNNQPWRFVVIFDRERLKRL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCEEEEEEECHHHHHHH
SDTAKEKWLANMEDAPFIRQYEKWMNNPEFNIFYNAPALIVIYGDSKAHWQVYDCSMVAQ
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEEEHHHHHHH
NINLLAEEQGLGCCWIGFAHNVLDEPEVKKELGMPEEYELVAPLIIGYPAVKREQSENPI
HHHHEECCCCCEEEEECHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCCC
KRKPVEINFL
CCCCEEEECC
>Mature Secondary Structure
MDSLTTIMKRRSSCRKFSAEALPRETIEALINTAVWAPSGSNNQPWRFVVIFDRERLKRL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCEEEEEEECHHHHHHH
SDTAKEKWLANMEDAPFIRQYEKWMNNPEFNIFYNAPALIVIYGDSKAHWQVYDCSMVAQ
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEEEHHHHHHH
NINLLAEEQGLGCCWIGFAHNVLDEPEVKKELGMPEEYELVAPLIIGYPAVKREQSENPI
HHHHEECCCCCEEEEECHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCCC
KRKPVEINFL
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]