| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is korA [H]
Identifier: 118580740
GI number: 118580740
Start: 2510754
End: 2511887
Strand: Reverse
Name: korA [H]
Synonym: Ppro_2325
Alternate gene names: 118580740
Gene position: 2511887-2510754 (Counterclockwise)
Preceding gene: 118580741
Following gene: 118580739
Centisome position: 62.67
GC content: 62.79
Gene sequence:
>1134_bases GTGGCGAAACGAGTTGCATTCCTTCAGGGTAATGAGGCCGCCGCCTTCGGTGCGCTCTATGCCGGTTGCGATTTCTTTGC CGGCTACCCCATAACCCCTGCCACCGAAGTCTCAGAGGTTCTCTCCGTCGAGCTTCCCAAGGTGGGGGGCAAGTTTATCC AGATGGAAGACGAGATCGGCGCCATGGCCGCCTGTCTGGGGGCGGCGCTGACCGGCTCCAAGGTGCTGACCGCCACCTCC GGCCCCGGCTTTTCCCTGAAGCAGGAGTTGATCGGCTATGGCTGCATCGCCGAGATCCCCTGCGTGATCATCGATGTCAT GCGCGGCGGTCCCTCCACCGGTATGCCCACGGGCCCCAGTCAGTCCGATATCATGGCCGCCCGCTGGGGCACCCACGGCG ACCATCCCGCCATCTGTCTTGTGCCGGCCTCGGTGCAGGAACTGTTCGAGGAGACGGTGCGCGCCTTCAACCTGGCTGAA ACGTACCGCACCCCGGTGATCGTCCTGCCGGACGAGATCATCGCCCACATGCGCGAGCGCATCGTTATTCCCGATGCGGG TGAGCTGGAGGTGATCGACCGCAGGCTCCCTTCCGTTCCTCCCGAAGAGTACAAGCCCTACGACACCAGTTTCGGCGATG TGCCCCCCCTGGCCTCATTCGGTTCCGGCTACCGTTTCCACGTGACCGGTCTGAACAAGATGCAGGACGGCTTTCCCACC ACCAAACCTTCCCTGGTCCAGGCCGAGCAGGAACGCCAGATGCGCAAGGTCAATGCCAATGTGGACGACATCGTCACCTA CGAGGAGTACCTGCTGGAGGATGCGGAAATCGCCGTCGTTGCCTTCGGGTCCACCTCCCGCTCGGTGCGCTACGCCATCA ACGTAGCCCGCGAGCAGGGGATCAGGGCCGGCATGTTCCGCATCAGGACGATCTGGCCCTTTCCCGACCGGCAGATCAGG GAACTTTCCACCAGGGTCAGGGCGATCATCACCCCGGAGATGAATCTGGGCATGTGCACCCAGGAGGTCCAGCGCTGCGT CGAGGGGAGGGTGCCGGTGCAGGGGCTCTTCCGCGTGGACGGTGAACCGATCAACCCCGACCAGATACTCGAAAGCCTTA AAAAGGTTCTCTAA
Upstream 100 bases:
>100_bases AAAACCGGAAGCATGCATCGCCTGCATGCAGTGTGAATTGCGCTGTCCAGACTTTGCCATCAAAGTCATCGTGGATACGA ACACGGGGAGGAACTGAGCG
Downstream 100 bases:
>100_bases ACCATGGCATTTGATTACGAAAAATATCTCCGTCCCGAAAAGCTGCCCCATATCTGGTGCCCCGGCTGCGGCCACGGCAT CGTCATGAAGGGGCTGATCC
Product: 2-oxoglutarate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MAKRVAFLQGNEAAAFGALYAGCDFFAGYPITPATEVSEVLSVELPKVGGKFIQMEDEIGAMAACLGAALTGSKVLTATS GPGFSLKQELIGYGCIAEIPCVIIDVMRGGPSTGMPTGPSQSDIMAARWGTHGDHPAICLVPASVQELFEETVRAFNLAE TYRTPVIVLPDEIIAHMRERIVIPDAGELEVIDRRLPSVPPEEYKPYDTSFGDVPPLASFGSGYRFHVTGLNKMQDGFPT TKPSLVQAEQERQMRKVNANVDDIVTYEEYLLEDAEIAVVAFGSTSRSVRYAINVAREQGIRAGMFRIRTIWPFPDRQIR ELSTRVRAIITPEMNLGMCTQEVQRCVEGRVPVQGLFRVDGEPINPDQILESLKKVL
Sequences:
>Translated_377_residues MAKRVAFLQGNEAAAFGALYAGCDFFAGYPITPATEVSEVLSVELPKVGGKFIQMEDEIGAMAACLGAALTGSKVLTATS GPGFSLKQELIGYGCIAEIPCVIIDVMRGGPSTGMPTGPSQSDIMAARWGTHGDHPAICLVPASVQELFEETVRAFNLAE TYRTPVIVLPDEIIAHMRERIVIPDAGELEVIDRRLPSVPPEEYKPYDTSFGDVPPLASFGSGYRFHVTGLNKMQDGFPT TKPSLVQAEQERQMRKVNANVDDIVTYEEYLLEDAEIAVVAFGSTSRSVRYAINVAREQGIRAGMFRIRTIWPFPDRQIR ELSTRVRAIITPEMNLGMCTQEVQRCVEGRVPVQGLFRVDGEPINPDQILESLKKVL >Mature_376_residues AKRVAFLQGNEAAAFGALYAGCDFFAGYPITPATEVSEVLSVELPKVGGKFIQMEDEIGAMAACLGAALTGSKVLTATSG PGFSLKQELIGYGCIAEIPCVIIDVMRGGPSTGMPTGPSQSDIMAARWGTHGDHPAICLVPASVQELFEETVRAFNLAET YRTPVIVLPDEIIAHMRERIVIPDAGELEVIDRRLPSVPPEEYKPYDTSFGDVPPLASFGSGYRFHVTGLNKMQDGFPTT KPSLVQAEQERQMRKVNANVDDIVTYEEYLLEDAEIAVVAFGSTSRSVRYAINVAREQGIRAGMFRIRTIWPFPDRQIRE LSTRVRAIITPEMNLGMCTQEVQRCVEGRVPVQGLFRVDGEPINPDQILESLKKVL
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 41242; Mature: 41111
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRVAFLQGNEAAAFGALYAGCDFFAGYPITPATEVSEVLSVELPKVGGKFIQMEDEIG CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHH AMAACLGAALTGSKVLTATSGPGFSLKQELIGYGCIAEIPCVIIDVMRGGPSTGMPTGPS HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC QSDIMAARWGTHGDHPAICLVPASVQELFEETVRAFNLAETYRTPVIVLPDEIIAHMRER CCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHE IVIPDAGELEVIDRRLPSVPPEEYKPYDTSFGDVPPLASFGSGYRFHVTGLNKMQDGFPT EECCCCCCHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHCCCCC TKPSLVQAEQERQMRKVNANVDDIVTYEEYLLEDAEIAVVAFGSTSRSVRYAINVAREQG CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHEEHHHHHCC IRAGMFRIRTIWPFPDRQIRELSTRVRAIITPEMNLGMCTQEVQRCVEGRVPVQGLFRVD CHHCEEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEC GEPINPDQILESLKKVL CCCCCHHHHHHHHHHHC >Mature Secondary Structure AKRVAFLQGNEAAAFGALYAGCDFFAGYPITPATEVSEVLSVELPKVGGKFIQMEDEIG CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHH AMAACLGAALTGSKVLTATSGPGFSLKQELIGYGCIAEIPCVIIDVMRGGPSTGMPTGPS HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC QSDIMAARWGTHGDHPAICLVPASVQELFEETVRAFNLAETYRTPVIVLPDEIIAHMRER CCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHE IVIPDAGELEVIDRRLPSVPPEEYKPYDTSFGDVPPLASFGSGYRFHVTGLNKMQDGFPT EECCCCCCHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHCCCCC TKPSLVQAEQERQMRKVNANVDDIVTYEEYLLEDAEIAVVAFGSTSRSVRYAINVAREQG CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHEEHHHHHCC IRAGMFRIRTIWPFPDRQIRELSTRVRAIITPEMNLGMCTQEVQRCVEGRVPVQGLFRVD CHHCEEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEC GEPINPDQILESLKKVL CCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]