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The map label for this gene is yfjY [C]

Identifier: 118580692

GI number: 118580692

Start: 2453298

End: 2453798

Strand: Reverse

Name: yfjY [C]

Synonym: Ppro_2277

Alternate gene names: 118580692

Gene position: 2453798-2453298 (Counterclockwise)

Preceding gene: 118580694

Following gene: 118580691

Centisome position: 61.22

GC content: 46.11

Gene sequence:

>501_bases
ATGACAATTGAAACATTATTCGGCCAGGAACAGGTTCCAGCGAAACCGAGAGCGATCAGGCTCAAGAAAATCAGAGCGGT
ATATGAAACATTGACCATCAAAGAGGGGAATAGCCGTTATCTGAAGCCGTTCACCAGATACAGCAGTCCGGAGCAGGTTT
TCGAAACTTTCAACTTTTTGCGGCATGAAACGAAGGAATATTTCTTTGCCATACACTTGGACGGCAAAAACCGTATCTGT
TGCGTTGACGAAGTATCAGTCGGCTCATTGAATCAGAGCGTTGTCCACCCAAGAGAAGTATTCAAAACGGCCCTCTTGTC
ATCGGCAGCAGCGATTATCCTGATGCACAATCATCCTTCAGGAGATCCAGCGCCAAGCAGAGAGGACATTGAAATAACAA
AACGATTAAAGGAAGCAGGAGAGCTTATCGGCGTGAAGGTATTGGATCACATCATTATCGGCGACAACTTTCATTCGTTT
GCCAGCCAGGGACTGCTGTAA

Upstream 100 bases:

>100_bases
CTGAATTGCTTGGTTCTGCAATGAGTGACCTCTGGTCGATCCTGGAATCCAACGGCTACACCATTGACATTGATACCAAT
CGACTAAAGAGGACATCGCC

Downstream 100 bases:

>100_bases
GGAATAAAACGACAATAGGATGCCATATGCATGCCGACAAACCGAAAGGAGTATTCAGATGAAATTCAATCCAGGGCAGC
TGGTCGTGACCAGAGGCGTA

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTIETLFGQEQVPAKPRAIRLKKIRAVYETLTIKEGNSRYLKPFTRYSSPEQVFETFNFLRHETKEYFFAIHLDGKNRIC
CVDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPSGDPAPSREDIEITKRLKEAGELIGVKVLDHIIIGDNFHSF
ASQGLL

Sequences:

>Translated_166_residues
MTIETLFGQEQVPAKPRAIRLKKIRAVYETLTIKEGNSRYLKPFTRYSSPEQVFETFNFLRHETKEYFFAIHLDGKNRIC
CVDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPSGDPAPSREDIEITKRLKEAGELIGVKVLDHIIIGDNFHSF
ASQGLL
>Mature_165_residues
TIETLFGQEQVPAKPRAIRLKKIRAVYETLTIKEGNSRYLKPFTRYSSPEQVFETFNFLRHETKEYFFAIHLDGKNRICC
VDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPSGDPAPSREDIEITKRLKEAGELIGVKVLDHIIIGDNFHSFA
SQGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=103, Percent_Identity=45.6310679611651, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI2367100, Length=103, Percent_Identity=43.6893203883495, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1788312, Length=103, Percent_Identity=44.6601941747573, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=40, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001405 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18766; Mature: 18635

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIETLFGQEQVPAKPRAIRLKKIRAVYETLTIKEGNSRYLKPFTRYSSPEQVFETFNFL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCCHHHHHHHHHHH
RHETKEYFFAIHLDGKNRICCVDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPS
HHHCCCEEEEEEECCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHCCEEEEEEECCCC
GDPAPSREDIEITKRLKEAGELIGVKVLDHIIIGDNFHSFASQGLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure 
TIETLFGQEQVPAKPRAIRLKKIRAVYETLTIKEGNSRYLKPFTRYSSPEQVFETFNFL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCCHHHHHHHHHHH
RHETKEYFFAIHLDGKNRICCVDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPS
HHHCCCEEEEEEECCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHCCEEEEEEECCCC
GDPAPSREDIEITKRLKEAGELIGVKVLDHIIIGDNFHSFASQGLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA