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The map label for this gene is ydiB [H]

Identifier: 118580676

GI number: 118580676

Start: 2440807

End: 2441301

Strand: Direct

Name: ydiB [H]

Synonym: Ppro_2261

Alternate gene names: 118580676

Gene position: 2440807-2441301 (Clockwise)

Preceding gene: 118580675

Following gene: 118580677

Centisome position: 60.9

GC content: 63.03

Gene sequence:

>495_bases
ATGAAACGGCTCTCCCTGGCGACCTCTTCGCCGGCAGAGACCGAGGAGCTTGGCCGACGCCTGGGAGAAATGCTCATTCC
CGGAACCTTCGTCGCCCTGTGCGGGGAACTGGGGGGGGGCAAGACCTGCTTCACCCGGGGGGTGGTGAGCGGAGCGGCGC
CCCAAAGCGCCCATCTGGTGGCCAGCCCCACCTTTGCCATCATGAACGAGTATCCCGGCACCCCTCCCATCTATCACTTC
GACTTCTACCGGTTATCCTCCTGTCACGAGATTGCCGAACTGGGCTTCGAGGATTTTTTCCAGGGAGAGGGCATCTGCCT
GGCCGAATGGTCCGAACGCCTGGAAGAGCTGCTTCCGGTTGAGCGCCTGAGCGTCACCTTCCAGCATGACGGCGACGACA
GGCGCATCATCACCATCCAGGCAGAAGGGGCCGGTCCGGAGGCCCTGCTGGAGCGGCTTGATGCCCGCCAGGAACCCAGA
AATGCTTTGACCTGA

Upstream 100 bases:

>100_bases
TGATGAGCAGCCGCAGGCTGAATTCCCTGCCGGTTCTCCAGGAGGGAAAACTGGTGGGGATCGTGTCGCGCATCGACATC
ATCCGCAGCCTGATCAACCG

Downstream 100 bases:

>100_bases
TCCGGTTTTGTCTGCTATACAGTGGAGTCCGCCAGCAGCTTGACGGACACCATTACCAGGAAAGGGAGTACCTGAAGTAT
GGCACTTGTCGTTCAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKRLSLATSSPAETEELGRRLGEMLIPGTFVALCGELGGGKTCFTRGVVSGAAPQSAHLVASPTFAIMNEYPGTPPIYHF
DFYRLSSCHEIAELGFEDFFQGEGICLAEWSERLEELLPVERLSVTFQHDGDDRRIITIQAEGAGPEALLERLDARQEPR
NALT

Sequences:

>Translated_164_residues
MKRLSLATSSPAETEELGRRLGEMLIPGTFVALCGELGGGKTCFTRGVVSGAAPQSAHLVASPTFAIMNEYPGTPPIYHF
DFYRLSSCHEIAELGFEDFFQGEGICLAEWSERLEELLPVERLSVTFQHDGDDRRIITIQAEGAGPEALLERLDARQEPR
NALT
>Mature_164_residues
MKRLSLATSSPAETEELGRRLGEMLIPGTFVALCGELGGGKTCFTRGVVSGAAPQSAHLVASPTFAIMNEYPGTPPIYHF
DFYRLSSCHEIAELGFEDFFQGEGICLAEWSERLEELLPVERLSVTFQHDGDDRRIITIQAEGAGPEALLERLDARQEPR
NALT

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=144, Percent_Identity=34.7222222222222, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17999; Mature: 17999

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSLATSSPAETEELGRRLGEMLIPGTFVALCGELGGGKTCFTRGVVSGAAPQSAHLV
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE
ASPTFAIMNEYPGTPPIYHFDFYRLSSCHEIAELGFEDFFQGEGICLAEWSERLEELLPV
ECCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHCCH
ERLSVTFQHDGDDRRIITIQAEGAGPEALLERLDARQEPRNALT
HHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRLSLATSSPAETEELGRRLGEMLIPGTFVALCGELGGGKTCFTRGVVSGAAPQSAHLV
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE
ASPTFAIMNEYPGTPPIYHFDFYRLSSCHEIAELGFEDFFQGEGICLAEWSERLEELLPV
ECCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHCCH
ERLSVTFQHDGDDRRIITIQAEGAGPEALLERLDARQEPRNALT
HHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]