| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ybbP [H]
Identifier: 118580669
GI number: 118580669
Start: 2434853
End: 2435638
Strand: Direct
Name: ybbP [H]
Synonym: Ppro_2254
Alternate gene names: 118580669
Gene position: 2434853-2435638 (Clockwise)
Preceding gene: 118580668
Following gene: 118580670
Centisome position: 60.75
GC content: 62.98
Gene sequence:
>786_bases ATGTCGGACCTGTTAGCCAGCTTCACCCTGCTCGATCTCTGCGACATCCTGATCCTGGCTGTCATCGTCTACCGCTTCGC CCTCATCCTGAAGGAGGACGTGGCCATCCGCCTGGTCCTGTTCCTGCTGGCCTTCTTCTCCCTGCTGGTCCTGTCATGCT TTTCAGGGTTCGCCGCCACCGGCTGGCTGCTGCGTTCCCTGTTCGGCTCAAGCCTGGTCATCCTGGCCGTCATCTTCCAG GGGGACATCAGGCGTGCCTTCATGCTCATGGGGCGCCGTCCGGTGGAGCCCCAGATCCGCGACGAAGAGCTGGTGATGAT CGAAGAGCTGATCAAGGCCACCGCCGAGATGGCCGAGAAGCACATCGGCGCGCTGATCGTCATCGTCCGCCAGCACCCCA TCGACCACCTGCTGGAGATCGGCACCCAGATCGAGGCCATGGTGACCAGCGAACTGCTCAACTCGATCTTTCTCCCCTAC TCCCCGATTCACGACGGAGCGGTGATCATCCAGAGGGGCAAGATTACCATGGCCGGCTGCCTGCTGCCGATCTCCCGCAA TCCGGATATCGCCAAGAGCTTCGGCACGCGCCACCGGGCCGCCCTGGGGCTCTCCGAACTGACCGATGCGCTGGTCCTGG TCGTCTCCGAGGAGACCGGCAAGATATCCATGGTCCACGACGGCAAGATCACCTATGACATGGCCGCGGCGGAAATCCGG CGCTTGCTGCGCAAGGGGCTGGACCTGAAGCGCAGCAACAAGCCGCAACCGCCGGGAGAGGACTGA
Upstream 100 bases:
>100_bases CTCGCCACGCAACCGAGCCGGATGCGCGCCGCCCCCCCCGGCGGATTCGGGAACAGAACACCCGGTCTGTTATCAAACAG ACACCCTTTCGAGGAGCTGA
Downstream 100 bases:
>100_bases CATGGACAGGATCCCCAGCGATACCGTCAGCCGCTTTCGCCCCCGCAACCTGACTCTCAAACTGCTCTGCCTCGCCCTTG CCTTCAGCGTCTGGAGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSDLLASFTLLDLCDILILAVIVYRFALILKEDVAIRLVLFLLAFFSLLVLSCFSGFAATGWLLRSLFGSSLVILAVIFQ GDIRRAFMLMGRRPVEPQIRDEELVMIEELIKATAEMAEKHIGALIVIVRQHPIDHLLEIGTQIEAMVTSELLNSIFLPY SPIHDGAVIIQRGKITMAGCLLPISRNPDIAKSFGTRHRAALGLSELTDALVLVVSEETGKISMVHDGKITYDMAAAEIR RLLRKGLDLKRSNKPQPPGED
Sequences:
>Translated_261_residues MSDLLASFTLLDLCDILILAVIVYRFALILKEDVAIRLVLFLLAFFSLLVLSCFSGFAATGWLLRSLFGSSLVILAVIFQ GDIRRAFMLMGRRPVEPQIRDEELVMIEELIKATAEMAEKHIGALIVIVRQHPIDHLLEIGTQIEAMVTSELLNSIFLPY SPIHDGAVIIQRGKITMAGCLLPISRNPDIAKSFGTRHRAALGLSELTDALVLVVSEETGKISMVHDGKITYDMAAAEIR RLLRKGLDLKRSNKPQPPGED >Mature_260_residues SDLLASFTLLDLCDILILAVIVYRFALILKEDVAIRLVLFLLAFFSLLVLSCFSGFAATGWLLRSLFGSSLVILAVIFQG DIRRAFMLMGRRPVEPQIRDEELVMIEELIKATAEMAEKHIGALIVIVRQHPIDHLLEIGTQIEAMVTSELLNSIFLPYS PIHDGAVIIQRGKITMAGCLLPISRNPDIAKSFGTRHRAALGLSELTDALVLVVSEETGKISMVHDGKITYDMAAAEIRR LLRKGLDLKRSNKPQPPGED
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 28889; Mature: 28758
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLASFTLLDLCDILILAVIVYRFALILKEDVAIRLVLFLLAFFSLLVLSCFSGFAAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLLRSLFGSSLVILAVIFQGDIRRAFMLMGRRPVEPQIRDEELVMIEELIKATAEMAEK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HIGALIVIVRQHPIDHLLEIGTQIEAMVTSELLNSIFLPYSPIHDGAVIIQRGKITMAGC HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHE LLPISRNPDIAKSFGTRHRAALGLSELTDALVLVVSEETGKISMVHDGKITYDMAAAEIR EEECCCCCCHHHHHCCHHHHHHCHHHHHHHHEEEEECCCCEEEEEECCCEEHHHHHHHHH RLLRKGLDLKRSNKPQPPGED HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SDLLASFTLLDLCDILILAVIVYRFALILKEDVAIRLVLFLLAFFSLLVLSCFSGFAAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLLRSLFGSSLVILAVIFQGDIRRAFMLMGRRPVEPQIRDEELVMIEELIKATAEMAEK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HIGALIVIVRQHPIDHLLEIGTQIEAMVTSELLNSIFLPYSPIHDGAVIIQRGKITMAGC HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHE LLPISRNPDIAKSFGTRHRAALGLSELTDALVLVVSEETGKISMVHDGKITYDMAAAEIR EEECCCCCCHHHHHCCHHHHHHCHHHHHHHHEEEEECCCCEEEEEECCCEEHHHHHHHHH RLLRKGLDLKRSNKPQPPGED HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]