| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is gluP [H]
Identifier: 118580602
GI number: 118580602
Start: 2359223
End: 2360035
Strand: Reverse
Name: gluP [H]
Synonym: Ppro_2186
Alternate gene names: 118580602
Gene position: 2360035-2359223 (Counterclockwise)
Preceding gene: 118580603
Following gene: 118580595
Centisome position: 58.88
GC content: 63.35
Gene sequence:
>813_bases ATGGCGCAAAAACCCATACTCTGCCCTCGCTGCCGGACCCTGATCGGCAGCGAGGAACAGACCTGTTCACGCTGCGGGAC ATCCCGCAACGCTTCCTGGTGGCAGTTCATCAACCGGACGGCCGGGGTATTGGAAGGGGAGTGGCTGGTCAGGGCGCTGA TCACGCTCAACCTGGTGTATTACTGCGTTTCGCTGCTGGTCAGCTTGTATATCGGCAGGGGAGGCGGGTTTCTCTCTCCC GATCGGGTGAGTCTGTTGCTGCTGGGGGCTACCGGCAGCGTGCCTCTGGACCAGTTCGGCCGCTTCTGGTCGCTGTTGAG CGCCAACTACCTGCATGGCGGCATACTGCACCTGCTCTTCAACCTGATGGCGCTGCGACAGATCGGTCCCTGGGTCGTTA ACGAGTACGGGCCCAGCCGCATGTTCATCATCTATACCCTGGGGGGCATCTTCGGCTTCTGGGTTTCCTGGCAGGCGGGG GTGGCCTTCACCATCGGCGCGTCCGCCGCCATATGCAGCCTGATCGGCTCCCTGCTGTACTTCGGAAAGAGCAGCGGCGG GGCCTACGGCGCCTCGGTGTACCGGGAGGTGAGCGGCTGGGTGGTCAGTCTGCTGGTTTTTGGCCTGATCGTGCCGGGGA TTAACAACTGGGGGCATGGCGGCGGCATCCTCGGCGGGATCCTGTTGGGCATGCTTGTGGGCTACAACGGACGCAGCCGC GAGACGTCGTGGCACCAGGGGGTGGCGCTGCTCTGTGCAGCAATGACCGCGGCTGTTCTGATCTGGCCACTGTTGACCAT GCTGCCGGGCTAG
Upstream 100 bases:
>100_bases GAGGTCGTGCCCCTGATGCGCTCACCTTTTCCGGAACGCTTCCGCCGCGACTGCTCCGGCGGCTTCGAACCATATCCCAC ACCCGACGAGGGAGCTTGAC
Downstream 100 bases:
>100_bases TACCCTGTAACGCTTGTTTTTTCGTACCAAACCCTCCCCTTGTCAGGGGAGGGTTAAAGGCTTCCCCCCTGACAAGGGGG GGCTGAGGAGGGTTGGTTTT
Product: rhomboid family protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MAQKPILCPRCRTLIGSEEQTCSRCGTSRNASWWQFINRTAGVLEGEWLVRALITLNLVYYCVSLLVSLYIGRGGGFLSP DRVSLLLLGATGSVPLDQFGRFWSLLSANYLHGGILHLLFNLMALRQIGPWVVNEYGPSRMFIIYTLGGIFGFWVSWQAG VAFTIGASAAICSLIGSLLYFGKSSGGAYGASVYREVSGWVVSLLVFGLIVPGINNWGHGGGILGGILLGMLVGYNGRSR ETSWHQGVALLCAAMTAAVLIWPLLTMLPG
Sequences:
>Translated_270_residues MAQKPILCPRCRTLIGSEEQTCSRCGTSRNASWWQFINRTAGVLEGEWLVRALITLNLVYYCVSLLVSLYIGRGGGFLSP DRVSLLLLGATGSVPLDQFGRFWSLLSANYLHGGILHLLFNLMALRQIGPWVVNEYGPSRMFIIYTLGGIFGFWVSWQAG VAFTIGASAAICSLIGSLLYFGKSSGGAYGASVYREVSGWVVSLLVFGLIVPGINNWGHGGGILGGILLGMLVGYNGRSR ETSWHQGVALLCAAMTAAVLIWPLLTMLPG >Mature_269_residues AQKPILCPRCRTLIGSEEQTCSRCGTSRNASWWQFINRTAGVLEGEWLVRALITLNLVYYCVSLLVSLYIGRGGGFLSPD RVSLLLLGATGSVPLDQFGRFWSLLSANYLHGGILHLLFNLMALRQIGPWVVNEYGPSRMFIIYTLGGIFGFWVSWQAGV AFTIGASAAICSLIGSLLYFGKSSGGAYGASVYREVSGWVVSLLVFGLIVPGINNWGHGGGILGGILLGMLVGYNGRSRE TSWHQGVALLCAAMTAAVLIWPLLTMLPG
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 29100; Mature: 28968
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKPILCPRCRTLIGSEEQTCSRCGTSRNASWWQFINRTAGVLEGEWLVRALITLNLVY CCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YCVSLLVSLYIGRGGGFLSPDRVSLLLLGATGSVPLDQFGRFWSLLSANYLHGGILHLLF HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLMALRQIGPWVVNEYGPSRMFIIYTLGGIFGFWVSWQAGVAFTIGASAAICSLIGSLLY HHHHHHHHCCHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHH FGKSSGGAYGASVYREVSGWVVSLLVFGLIVPGINNWGHGGGILGGILLGMLVGYNGRSR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC ETSWHQGVALLCAAMTAAVLIWPLLTMLPG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQKPILCPRCRTLIGSEEQTCSRCGTSRNASWWQFINRTAGVLEGEWLVRALITLNLVY CCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YCVSLLVSLYIGRGGGFLSPDRVSLLLLGATGSVPLDQFGRFWSLLSANYLHGGILHLLF HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLMALRQIGPWVVNEYGPSRMFIIYTLGGIFGFWVSWQAGVAFTIGASAAICSLIGSLLY HHHHHHHHCCHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHH FGKSSGGAYGASVYREVSGWVVSLLVFGLIVPGINNWGHGGGILGGILLGMLVGYNGRSR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC ETSWHQGVALLCAAMTAAVLIWPLLTMLPG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]