| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580591
Identifier: 118580591
GI number: 118580591
Start: 2348338
End: 2349051
Strand: Reverse
Name: 118580591
Synonym: Ppro_2175
Alternate gene names: NA
Gene position: 2349051-2348338 (Counterclockwise)
Preceding gene: 118580592
Following gene: 118580590
Centisome position: 58.61
GC content: 55.04
Gene sequence:
>714_bases ATGAAGCGTCTGTTGACAATCCATACGGCTATTCTGGTCGTTACCCTCATCCTGGCAGTTGCCCGCGTTGATGCGGGGAC GGTACTTGTGCCTGGCATGTCGGGTGGTGCTCTCATTGTCAGCAATGTAACGAGCCTGAAAGAGGCTCGTTACCGCTCGA CCATCCACCAGAAATATGACTTCAGTTGCGGGTCCGCGGCATTGGCCACCCTGCTGACGCACCACTACGAAGACCGGGTC AGCGAGCAGGAAGTCTTCAAATGGATGTATACCCACGGCGAGCAGGAAAAAATTCGTCGTGAAGGCTTTTCGCTGCTGGA CATGAAATACTTCCTGGAAGCCCATGGCTACCTTGCCGATGGCTACAGGGTTGAGCTGGACAAACTGGCCCTGGCTGGTG TGCCGGCCATCGTCCTGGTCAATATGAAGGGGTACCGGCATTTCGTGGTGGTGAAAGGGGTGACCGACAAGAGGGTGCTG GTGGGTGATCCGGGACTGGGAACGAGGATCGTAGCGCGAAACGAGTTTGAAAAGATGTGGAACGGCCTGGTGTTTATCAT CCGGAACAGGAGCGTCCGGTCTGAAAACAATTTCAATCGTCTGGAAGAATGGCGCTGCGTCAGGGAAAAGGCTCCACTCG GTCTCGCCCTGAAAAACAGCGATCTGGCAAGCATAACCATGCTTTTGCCTGGTTCGGGAGGAGTACTGCCATGA
Upstream 100 bases:
>100_bases GTGGATTTGCCACCGTTATCCAGAACTCGGGCAATCAGGTGCTCATCCAGAATGATCTGATCGTCAACGTAACCATGCAC TGAATCGAGCGCACGATCCC
Downstream 100 bases:
>100_bases CGACTCTACTGGGAAAACACATTAGAGGCGCGGTTTTTGTGATGGGGCTTATGGCCATGTCAGCCAACTGTCCCGCATAT GCGGCCATGAATGATGCATT
Product: peptidase C39, bacteriocin processing
Products: NA
Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C; Periplasmic
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYDFSCGSAALATLLTHHYEDRV SEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLADGYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVL VGDPGLGTRIVARNEFEKMWNGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP
Sequences:
>Translated_237_residues MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYDFSCGSAALATLLTHHYEDRV SEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLADGYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVL VGDPGLGTRIVARNEFEKMWNGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP >Mature_237_residues MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYDFSCGSAALATLLTHHYEDRV SEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLADGYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVL VGDPGLGTRIVARNEFEKMWNGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP
Specific function: Unknown
COG id: COG3271
COG function: function code R; Predicted double-glycine peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26472; Mature: 26472
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS50990 PEPTIDASE_C39
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYD CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHCC FSCGSAALATLLTHHYEDRVSEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLAD CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCEECC GYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVLVGDPGLGTRIVARNEFEKMW CEEEEHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHH NGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYD CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHCC FSCGSAALATLLTHHYEDRVSEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLAD CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCEECC GYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVLVGDPGLGTRIVARNEFEKMW CEEEEHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHH NGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA