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The map label for this gene is ydhO [H]

Identifier: 118580457

GI number: 118580457

Start: 2190926

End: 2191780

Strand: Direct

Name: ydhO [H]

Synonym: Ppro_2041

Alternate gene names: 118580457

Gene position: 2190926-2191780 (Clockwise)

Preceding gene: 118580456

Following gene: 118580458

Centisome position: 54.66

GC content: 60.7

Gene sequence:

>855_bases
ATGTATCGTTTTATTCGACCAGCCATACTGGCGCTCTGCTGCGTCATCGTCCTGTATTCCCCCATGCTTGCCGCCGCCGC
GGCGCTTTCCGGAGTGCGAAGCCTGGGCTACGCCATCCAGATGGGCGCATTCTCCGACGTAAAAAACGCAGAGCGATTCA
CGGCCACGCTCCAGGCCAAGGGGATCGAGGCCTTCTATTTCCGCAAGGACAACGGCATCTACGCCGTCCGTTTCGGTGAC
TTCGCCACCAAGGCCAAGGCCCGCACCGCGGCCGACCGCCTGGTGGCGGACAAACTGATCGACGGCTACTACATCGCCCC
CCCCCATCAGGCCGTCTTCTCGGCCGCCAAGGGACCGGGATGGCAGAAGCAACCCGCTGCCGAGATCCATGCGGCACGGG
ACAAGAAGCGCGACGACAGCACAGCAATGCGGAGCGTCGATGGCTCAAAACAGAATAATAGATCAAGCCGCTCGGAGCGC
GACATGGGCTTTATCGCGGCCCGCACCGCCGAACGTTTCGTGGGCATACCCTACCGCTGGGGCGGGGACAACGTAGTCGA
AGGAATGGATTGCAGCGGATTCGTCAGGGCCGTCTACAACCTGTGCGGCGTGAGCATCCCGCGCACGTCGCGGGATCAGT
TCAAGGCCGGTGAGTCCGTCAGCCGGGGGACACTACTGGATGGCGACCTGGTCTTCTTCGGCTCGGACGAGGACAAAATC
AATCATGTGGGCATCTATGTGGGTAAGGGCAAATTCGTCCACGCCCCCCGCAGGGGCGAGGAGATTCGCATAACCTCAAT
CGATGACACCTATTTCGACAAGCGCTTCGTCGGCGCACGCAGATATTTTCAATAA

Upstream 100 bases:

>100_bases
CCCTCTCCGAACCCAAAAAGTTCTTTACTCGTCGGGCCATAATATGGATACTAACCCGACACGCCAATGTCCACTCCACG
AATGATCACCCTTTGAGAGA

Downstream 100 bases:

>100_bases
AACGGGGAACACATGGCCATCATCAGACCATTCCGGGCTCTTCGCCCTCCAAAGAATCTTGCCGAACAGGTTGCCGCCCT
GCCCTACGACGTCATGAACG

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MYRFIRPAILALCCVIVLYSPMLAAAAALSGVRSLGYAIQMGAFSDVKNAERFTATLQAKGIEAFYFRKDNGIYAVRFGD
FATKAKARTAADRLVADKLIDGYYIAPPHQAVFSAAKGPGWQKQPAAEIHAARDKKRDDSTAMRSVDGSKQNNRSSRSER
DMGFIAARTAERFVGIPYRWGGDNVVEGMDCSGFVRAVYNLCGVSIPRTSRDQFKAGESVSRGTLLDGDLVFFGSDEDKI
NHVGIYVGKGKFVHAPRRGEEIRITSIDDTYFDKRFVGARRYFQ

Sequences:

>Translated_284_residues
MYRFIRPAILALCCVIVLYSPMLAAAAALSGVRSLGYAIQMGAFSDVKNAERFTATLQAKGIEAFYFRKDNGIYAVRFGD
FATKAKARTAADRLVADKLIDGYYIAPPHQAVFSAAKGPGWQKQPAAEIHAARDKKRDDSTAMRSVDGSKQNNRSSRSER
DMGFIAARTAERFVGIPYRWGGDNVVEGMDCSGFVRAVYNLCGVSIPRTSRDQFKAGESVSRGTLLDGDLVFFGSDEDKI
NHVGIYVGKGKFVHAPRRGEEIRITSIDDTYFDKRFVGARRYFQ
>Mature_284_residues
MYRFIRPAILALCCVIVLYSPMLAAAAALSGVRSLGYAIQMGAFSDVKNAERFTATLQAKGIEAFYFRKDNGIYAVRFGD
FATKAKARTAADRLVADKLIDGYYIAPPHQAVFSAAKGPGWQKQPAAEIHAARDKKRDDSTAMRSVDGSKQNNRSSRSER
DMGFIAARTAERFVGIPYRWGGDNVVEGMDCSGFVRAVYNLCGVSIPRTSRDQFKAGESVSRGTLLDGDLVFFGSDEDKI
NHVGIYVGKGKFVHAPRRGEEIRITSIDDTYFDKRFVGARRYFQ

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=112, Percent_Identity=44.6428571428571, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1786421, Length=137, Percent_Identity=35.7664233576642, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788501, Length=110, Percent_Identity=41.8181818181818, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1788001, Length=114, Percent_Identity=38.5964912280702, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 31418; Mature: 31418

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRFIRPAILALCCVIVLYSPMLAAAAALSGVRSLGYAIQMGAFSDVKNAERFTATLQAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCHHHHEEEEECC
GIEAFYFRKDNGIYAVRFGDFATKAKARTAADRLVADKLIDGYYIAPPHQAVFSAAKGPG
CCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCC
WQKQPAAEIHAARDKKRDDSTAMRSVDGSKQNNRSSRSERDMGFIAARTAERFVGIPYRW
CCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCEEE
GGDNVVEGMDCSGFVRAVYNLCGVSIPRTSRDQFKAGESVSRGTLLDGDLVFFGSDEDKI
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCE
NHVGIYVGKGKFVHAPRRGEEIRITSIDDTYFDKRFVGARRYFQ
EEEEEEEECCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYRFIRPAILALCCVIVLYSPMLAAAAALSGVRSLGYAIQMGAFSDVKNAERFTATLQAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCHHHHEEEEECC
GIEAFYFRKDNGIYAVRFGDFATKAKARTAADRLVADKLIDGYYIAPPHQAVFSAAKGPG
CCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCC
WQKQPAAEIHAARDKKRDDSTAMRSVDGSKQNNRSSRSERDMGFIAARTAERFVGIPYRW
CCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCEEE
GGDNVVEGMDCSGFVRAVYNLCGVSIPRTSRDQFKAGESVSRGTLLDGDLVFFGSDEDKI
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCE
NHVGIYVGKGKFVHAPRRGEEIRITSIDDTYFDKRFVGARRYFQ
EEEEEEEECCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]