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The map label for this gene is ybeX [C]

Identifier: 118580452

GI number: 118580452

Start: 2186553

End: 2187443

Strand: Direct

Name: ybeX [C]

Synonym: Ppro_2036

Alternate gene names: 118580452

Gene position: 2186553-2187443 (Clockwise)

Preceding gene: 118580451

Following gene: 118580453

Centisome position: 54.55

GC content: 55.22

Gene sequence:

>891_bases
ATGCAAGGTAATATTTTTCACATCATCGGGAGGAAAGACACGTTGGAAGAGGGGAGCACCATAACATCCGGAATTTTCAA
GCTGTTCGAACGCTTCGTCCACGGACGGAAGAAAATGACCGCCTATGAGATCCAGGACCTCATCAAGGCAAGCGAGGACG
AGGGTGTGGTCAACGAGGAGGAGAGCGAGATGATTCGCTCCATATTCTCGCTCCGCTCAACCGTGGTGCGCGAGGTCATG
GTACCGCGCATCGACATGGCCTGCATTTCCGTGGATGCGACCGTCCGGGAAATTCTGGAGACCATCCTGGCCTGCGGCCA
TTCGCGCATACCGGTCTTTGAAAACAGCGTCGACAACGTCATCGGACTACTCTATGCCAAGGACATGCTCAAATACTGGG
GACTGTCCGAGGATCTGATCAGGGTCCGCTCCATCATGCGGCCCCCCTACTTTATCCCCGAAACCAAGAATCTGGAGCAA
CTGCTCCAGGAGTTCAAGAATAAGCACGTTCACCTGGCCATCGTCATCGACGAATACGGCGGCACATCGGGCCTGATCAC
CATCGAGGACCTGCTGGAGCAGATCGTAGGCGACATCCAGGACGAGCACGACCGGGAAGAGGCGCTCTTCACGACTAATG
ACGACGGATCGCTCACCGCCGATGCCCGTCTGCCCATCGAGGAACTGGAGCAACTCTTTGACATGGAGATCGAACATGAC
AAGTTCGATACGGTTGGCGGCCTGATCTTCCACCTGACCGGAAAGATCTCCGCACCCGGCGATACCGTCGAAAATGAACA
GCTTGTCATCGCCGTCCTTGACTCCGATGAACGCAAGATCAAGCGGGTCTGCATAACCCGCAAGAACAACATGGAAACGG
ACAACGAGTGA

Upstream 100 bases:

>100_bases
CTCCCTGGTCGGTGCCGGCATAACGGCCATTGTGCTGCTTCTTTTCAAACAGTTCGCATAGACTGTGATAGGGCACGGCT
TCGTCCACGGACTACCACAA

Downstream 100 bases:

>100_bases
ACGCGGGATCCCTGTACACACACGCGGCCGCGATCTTCGATCGCCCCGGCCGTCTCGCCATCGCCTCCGGCGTTCTGATC
GCCCTCTCCTTTCCCAGCAC

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MQGNIFHIIGRKDTLEEGSTITSGIFKLFERFVHGRKKMTAYEIQDLIKASEDEGVVNEEESEMIRSIFSLRSTVVREVM
VPRIDMACISVDATVREILETILACGHSRIPVFENSVDNVIGLLYAKDMLKYWGLSEDLIRVRSIMRPPYFIPETKNLEQ
LLQEFKNKHVHLAIVIDEYGGTSGLITIEDLLEQIVGDIQDEHDREEALFTTNDDGSLTADARLPIEELEQLFDMEIEHD
KFDTVGGLIFHLTGKISAPGDTVENEQLVIAVLDSDERKIKRVCITRKNNMETDNE

Sequences:

>Translated_296_residues
MQGNIFHIIGRKDTLEEGSTITSGIFKLFERFVHGRKKMTAYEIQDLIKASEDEGVVNEEESEMIRSIFSLRSTVVREVM
VPRIDMACISVDATVREILETILACGHSRIPVFENSVDNVIGLLYAKDMLKYWGLSEDLIRVRSIMRPPYFIPETKNLEQ
LLQEFKNKHVHLAIVIDEYGGTSGLITIEDLLEQIVGDIQDEHDREEALFTTNDDGSLTADARLPIEELEQLFDMEIEHD
KFDTVGGLIFHLTGKISAPGDTVENEQLVIAVLDSDERKIKRVCITRKNNMETDNE
>Mature_296_residues
MQGNIFHIIGRKDTLEEGSTITSGIFKLFERFVHGRKKMTAYEIQDLIKASEDEGVVNEEESEMIRSIFSLRSTVVREVM
VPRIDMACISVDATVREILETILACGHSRIPVFENSVDNVIGLLYAKDMLKYWGLSEDLIRVRSIMRPPYFIPETKNLEQ
LLQEFKNKHVHLAIVIDEYGGTSGLITIEDLLEQIVGDIQDEHDREEALFTTNDDGSLTADARLPIEELEQLFDMEIEHD
KFDTVGGLIFHLTGKISAPGDTVENEQLVIAVLDSDERKIKRVCITRKNNMETDNE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=218, Percent_Identity=33.0275229357798, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI94681046, Length=201, Percent_Identity=31.8407960199005, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI40068055, Length=199, Percent_Identity=29.6482412060301, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI40068053, Length=199, Percent_Identity=29.6482412060301, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI40068049, Length=188, Percent_Identity=29.7872340425532, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1786879, Length=277, Percent_Identity=30.6859205776173, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI87082033, Length=288, Percent_Identity=25.6944444444444, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI145693175, Length=238, Percent_Identity=26.890756302521, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788119, Length=298, Percent_Identity=26.510067114094, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790664, Length=272, Percent_Identity=23.8970588235294, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 33687; Mature: 33687

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNIFHIIGRKDTLEEGSTITSGIFKLFERFVHGRKKMTAYEIQDLIKASEDEGVVNEE
CCCCEEEEECCCCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCH
ESEMIRSIFSLRSTVVREVMVPRIDMACISVDATVREILETILACGHSRIPVFENSVDNV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHCCCCCCCCHHCCHHHH
IGLLYAKDMLKYWGLSEDLIRVRSIMRPPYFIPETKNLEQLLQEFKNKHVHLAIVIDEYG
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC
GTSGLITIEDLLEQIVGDIQDEHDREEALFTTNDDGSLTADARLPIEELEQLFDMEIEHD
CCCCCEEHHHHHHHHHHHHCCCCCHHCCEEEECCCCCEEECCCCCHHHHHHHHCCCCCCC
KFDTVGGLIFHLTGKISAPGDTVENEQLVIAVLDSDERKIKRVCITRKNNMETDNE
HHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQGNIFHIIGRKDTLEEGSTITSGIFKLFERFVHGRKKMTAYEIQDLIKASEDEGVVNEE
CCCCEEEEECCCCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCH
ESEMIRSIFSLRSTVVREVMVPRIDMACISVDATVREILETILACGHSRIPVFENSVDNV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHCCCCCCCCHHCCHHHH
IGLLYAKDMLKYWGLSEDLIRVRSIMRPPYFIPETKNLEQLLQEFKNKHVHLAIVIDEYG
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC
GTSGLITIEDLLEQIVGDIQDEHDREEALFTTNDDGSLTADARLPIEELEQLFDMEIEHD
CCCCCEEHHHHHHHHHHHHCCCCCHHCCEEEECCCCCEEECCCCCHHHHHHHHCCCCCCC
KFDTVGGLIFHLTGKISAPGDTVENEQLVIAVLDSDERKIKRVCITRKNNMETDNE
HHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]