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The map label for this gene is ybeY [C]

Identifier: 118580450

GI number: 118580450

Start: 2185444

End: 2185827

Strand: Direct

Name: ybeY [C]

Synonym: Ppro_2034

Alternate gene names: 118580450

Gene position: 2185444-2185827 (Clockwise)

Preceding gene: 118580449

Following gene: 118580451

Centisome position: 54.53

GC content: 59.64

Gene sequence:

>384_bases
TTGGGATGTCCTGAGGGGACGGAGCTGTCGATCTCCATCGTGGGAGACCGGGCTATCCGCCGCATCAACCGCGACTATCT
GAACAGGGATCGTCCCACCAACGTGATCTCATTCTCCCTCCAGGAAGGGGAATGCGGCGCCATACCCTCCCTTGCACTGG
GCGATGTGGTCATCTCGGCCGACACTGCTCTGCGAGAGGCTGAAGAAGGGGGGATGGAATTCTTCGAGCGTCTCTGTTTC
CTGCTGCTGCACGGCACCCTGCACCTGTGCGGTTACGACCATGAGCGGAGCGGTGAGGAAGAAGCGGCCAGGATGGAGGC
CAGGGAGGTGGAGTTATTCAGCGTCCTGAAGAACGAGGGGTTGTTAAGCCAGACAGGTTCATAG

Upstream 100 bases:

>100_bases
GGAGGCAGCGCACGTGCAGATACTGTTGAGCAACCGCCAGAGGAGGCACCGGATCAGGAGCGGCCAACTGAAAAAGGTGG
CGGCGAGGATCTTAAGCGAC

Downstream 100 bases:

>100_bases
ACTCGGCCAACTGCGCCATCGCAGGCATCCTGCATGCCGTGCGGGCTGAAAAGCACATGCGCAACCACTTTGCCTTTGCG
CTGCTAGTGCTGCTGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MGCPEGTELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISADTALREAEEGGMEFFERLCF
LLLHGTLHLCGYDHERSGEEEAARMEAREVELFSVLKNEGLLSQTGS

Sequences:

>Translated_127_residues
MGCPEGTELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISADTALREAEEGGMEFFERLCF
LLLHGTLHLCGYDHERSGEEEAARMEAREVELFSVLKNEGLLSQTGS
>Mature_126_residues
GCPEGTELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISADTALREAEEGGMEFFERLCFL
LLHGTLHLCGYDHERSGEEEAARMEAREVELFSVLKNEGLLSQTGS

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

Organism=Escherichia coli, GI1786880, Length=90, Percent_Identity=38.8888888888889, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 13989; Mature: 13858

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCPEGTELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISA
CCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHEEEEC
DTALREAEEGGMEFFERLCFLLLHGTLHLCGYDHERSGEEEAARMEAREVELFSVLKNEG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
LLSQTGS
CCCCCCC
>Mature Secondary Structure 
GCPEGTELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISA
CCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHEEEEC
DTALREAEEGGMEFFERLCFLLLHGTLHLCGYDHERSGEEEAARMEAREVELFSVLKNEG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
LLSQTGS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA