| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580436
Identifier: 118580436
GI number: 118580436
Start: 2169402
End: 2170877
Strand: Reverse
Name: 118580436
Synonym: Ppro_2020
Alternate gene names: NA
Gene position: 2170877-2169402 (Counterclockwise)
Preceding gene: 118580437
Following gene: 118580435
Centisome position: 54.16
GC content: 58.27
Gene sequence:
>1476_bases ATGGTTGTGATAGCACTGCTCTTCTGCTGGACGGCCTGCGCCTGGGCTTCAGGCCAGCCGATACGGCTCTCCCTGGGTGA GGCGGTCCGGATGGCGGCGGAGAAAAACCTGGACGTGCGGGCCGAACTGTACACGCCGGCCCAGTACCAGGCCGACATCA ATCGCAACAGGGCAATCTACGATCCGCAACTGAACATTGAGACGCACTACAGTGATTTCACCAACCCTGTATCCGGTTCC TATGGCAGCGCCTCCAACAAGGGGCACTCCTTTGTGCTGGACTCCTCCCTCAGCCAGCTGTTCTGGACCGGAGCTACCGC GACACTGGGATTCAACAACAGCCACACCAAGACCAACCAGTTCTCCTCCCTGAATAACTACTGGCAGTCCAGTCTCGGCG TCACGCTCAGCCAGCCGCTGCTCAAGAATATGGGGCGCGATGCTACCGATCTCGGCATTTCCATTTCACGATTCTCCAAA TACGCATCCATGGAGCATTTCCGAAATCTCCTGCTGAATACCGTCAGTCAGGCCAGAACGGAGTATTTCAAGCTCTACGG CTTGCAGGAGGTGCGGGAGGTCAAGCGGGTATCTCTGGCGTTGGCCCGCAGGATTCTCGACGAAACCAGGGCCAGGGTTT CCGCCGGTGTCCTGCCGGCCATGGAAATATTAAATGCCGAATACGGCGTGACGACACGGGAAAGGGAGCTGATTGCCGCC GAGAAAGAGGTTAACGATCAGGTGGATGTTCTGCGACTGCTCCTGCAGATTTCCGGCAAAGGGGAGATTGTCATCAGCGA CACGCCGCGCCGCGCGCCGTATCCGCTGGACCAGGATCAGGCCCTGCGACAGGCTATGGGCCGTCCAGATATCAGGGAAC TGCAACGGAGCCTGGACATCAGCGAACTCCAGTCCCGCGTCTTTGGCAACAATATCAAGCCCGATCTCAATTTGAGCCTC TCCGGTTCGCTGGTCGGGCAGGGCCACAGCTACGGCCGCGATATTGGGGATCTGGGAAGCTTTGATTACCCCGCCTGGAG CATCGGTCTGGTCTTCAAATACCCCTTGGGAAACAATGCTGCGGAAAACGACTATCGCAAGAGTCGTCTCAAAAATGCCC AGACCGCCCTGCAGATCCGCAGTCTGGAGGAGAGCGCGAAGAACGAGGTGCTCAGCTTCATCCGCGCCATCGATAGCGCG TTCAAGCAGATCGAGGTCGCTGACCGGGGCAGGGCCTTTGCCGAAGAGCGTCTTCGCGCATTTATGCGCAAGAACAGCGT CGGACTGGCTACCACAAAGGACGTGCTCGAAGTGGAACATGACCTGGCCGATGCCAAGAACAGCCAGATTGCGGCAGCCG TTGCCCATGACAATGCCATTACTCGTTTCCTGCAGGCGACGGGCCAACTACTCGACCAGGAGGGGGTCCGTTTCGTCGAG GGCGACGCTGACCGCCTCTACCTGAATATCTACTGA
Upstream 100 bases:
>100_bases GTGGAGAACAGGGATTGATCGACCTGCTACATGGCGGGGCAGGGGTGCGCGGTATCCCTCCCCGCCGTTTTCATACAGGG ATGCTGGCGTGAGATCGGTG
Downstream 100 bases:
>100_bases TGCTGCGAATCGGACGTATAGAATACGCCAACTGCACCCCGCTCTTTCATGCCCTGAATGCGCTTTTTCCGGAGAACGAC TACCGTTACGTCGGCGGGGT
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Efflux Family Protein; Acriflavin Resistance Protein; Outer Membrane Protein; Outer Membrane Protein-Like; Outer Membrane Lipoprotein; RND Family Efflux Pump Outer Membrane Protein; Outer Membrane Channel Protein; Outer Efflux Pump Domain-Containing Protein
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MVVIALLFCWTACAWASGQPIRLSLGEAVRMAAEKNLDVRAELYTPAQYQADINRNRAIYDPQLNIETHYSDFTNPVSGS YGSASNKGHSFVLDSSLSQLFWTGATATLGFNNSHTKTNQFSSLNNYWQSSLGVTLSQPLLKNMGRDATDLGISISRFSK YASMEHFRNLLLNTVSQARTEYFKLYGLQEVREVKRVSLALARRILDETRARVSAGVLPAMEILNAEYGVTTRERELIAA EKEVNDQVDVLRLLLQISGKGEIVISDTPRRAPYPLDQDQALRQAMGRPDIRELQRSLDISELQSRVFGNNIKPDLNLSL SGSLVGQGHSYGRDIGDLGSFDYPAWSIGLVFKYPLGNNAAENDYRKSRLKNAQTALQIRSLEESAKNEVLSFIRAIDSA FKQIEVADRGRAFAEERLRAFMRKNSVGLATTKDVLEVEHDLADAKNSQIAAAVAHDNAITRFLQATGQLLDQEGVRFVE GDADRLYLNIY
Sequences:
>Translated_491_residues MVVIALLFCWTACAWASGQPIRLSLGEAVRMAAEKNLDVRAELYTPAQYQADINRNRAIYDPQLNIETHYSDFTNPVSGS YGSASNKGHSFVLDSSLSQLFWTGATATLGFNNSHTKTNQFSSLNNYWQSSLGVTLSQPLLKNMGRDATDLGISISRFSK YASMEHFRNLLLNTVSQARTEYFKLYGLQEVREVKRVSLALARRILDETRARVSAGVLPAMEILNAEYGVTTRERELIAA EKEVNDQVDVLRLLLQISGKGEIVISDTPRRAPYPLDQDQALRQAMGRPDIRELQRSLDISELQSRVFGNNIKPDLNLSL SGSLVGQGHSYGRDIGDLGSFDYPAWSIGLVFKYPLGNNAAENDYRKSRLKNAQTALQIRSLEESAKNEVLSFIRAIDSA FKQIEVADRGRAFAEERLRAFMRKNSVGLATTKDVLEVEHDLADAKNSQIAAAVAHDNAITRFLQATGQLLDQEGVRFVE GDADRLYLNIY >Mature_491_residues MVVIALLFCWTACAWASGQPIRLSLGEAVRMAAEKNLDVRAELYTPAQYQADINRNRAIYDPQLNIETHYSDFTNPVSGS YGSASNKGHSFVLDSSLSQLFWTGATATLGFNNSHTKTNQFSSLNNYWQSSLGVTLSQPLLKNMGRDATDLGISISRFSK YASMEHFRNLLLNTVSQARTEYFKLYGLQEVREVKRVSLALARRILDETRARVSAGVLPAMEILNAEYGVTTRERELIAA EKEVNDQVDVLRLLLQISGKGEIVISDTPRRAPYPLDQDQALRQAMGRPDIRELQRSLDISELQSRVFGNNIKPDLNLSL SGSLVGQGHSYGRDIGDLGSFDYPAWSIGLVFKYPLGNNAAENDYRKSRLKNAQTALQIRSLEESAKNEVLSFIRAIDSA FKQIEVADRGRAFAEERLRAFMRKNSVGLATTKDVLEVEHDLADAKNSQIAAAVAHDNAITRFLQATGQLLDQEGVRFVE GDADRLYLNIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54743; Mature: 54743
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVIALLFCWTACAWASGQPIRLSLGEAVRMAAEKNLDVRAELYTPAQYQADINRNRAIY CHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCEEE DPQLNIETHYSDFTNPVSGSYGSASNKGHSFVLDSSLSQLFWTGATATLGFNNSHTKTNQ CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEECCCCCCCCCHH FSSLNNYWQSSLGVTLSQPLLKNMGRDATDLGISISRFSKYASMEHFRNLLLNTVSQART HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EYFKLYGLQEVREVKRVSLALARRILDETRARVSAGVLPAMEILNAEYGVTTRERELIAA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHH EKEVNDQVDVLRLLLQISGKGEIVISDTPRRAPYPLDQDQALRQAMGRPDIRELQRSLDI HHHCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCH SELQSRVFGNNIKPDLNLSLSGSLVGQGHSYGRDIGDLGSFDYPAWSIGLVFKYPLGNNA HHHHHHHHCCCCCCCCCEEECCCEEECCCHHCCCCCCCCCCCCCCEEEEEEEEECCCCCC AENDYRKSRLKNAQTALQIRSLEESAKNEVLSFIRAIDSAFKQIEVADRGRAFAEERLRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FMRKNSVGLATTKDVLEVEHDLADAKNSQIAAAVAHDNAITRFLQATGQLLDQEGVRFVE HHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEE GDADRLYLNIY CCCCEEEEEEC >Mature Secondary Structure MVVIALLFCWTACAWASGQPIRLSLGEAVRMAAEKNLDVRAELYTPAQYQADINRNRAIY CHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCEEE DPQLNIETHYSDFTNPVSGSYGSASNKGHSFVLDSSLSQLFWTGATATLGFNNSHTKTNQ CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEECCCCCCCCCHH FSSLNNYWQSSLGVTLSQPLLKNMGRDATDLGISISRFSKYASMEHFRNLLLNTVSQART HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EYFKLYGLQEVREVKRVSLALARRILDETRARVSAGVLPAMEILNAEYGVTTRERELIAA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHH EKEVNDQVDVLRLLLQISGKGEIVISDTPRRAPYPLDQDQALRQAMGRPDIRELQRSLDI HHHCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCH SELQSRVFGNNIKPDLNLSLSGSLVGQGHSYGRDIGDLGSFDYPAWSIGLVFKYPLGNNA HHHHHHHHCCCCCCCCCEEECCCEEECCCHHCCCCCCCCCCCCCCEEEEEEEEECCCCCC AENDYRKSRLKNAQTALQIRSLEESAKNEVLSFIRAIDSAFKQIEVADRGRAFAEERLRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FMRKNSVGLATTKDVLEVEHDLADAKNSQIAAAVAHDNAITRFLQATGQLLDQEGVRFVE HHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEE GDADRLYLNIY CCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA