| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580435
Identifier: 118580435
GI number: 118580435
Start: 2168575
End: 2169402
Strand: Reverse
Name: 118580435
Synonym: Ppro_2019
Alternate gene names: NA
Gene position: 2169402-2168575 (Counterclockwise)
Preceding gene: 118580436
Following gene: 118580433
Centisome position: 54.13
GC content: 57.61
Gene sequence:
>828_bases ATGCTGCGAATCGGACGTATAGAATACGCCAACTGCACCCCGCTCTTTCATGCCCTGAATGCGCTTTTTCCGGAGAACGA CTACCGTTACGTCGGCGGGGTCCCGGCATACCTGAACGGAATGCTGGCGTCGGGAGGGATCGATGTCTGCCCCTCTTCAT CGATCACCTTTGCCACCCATTCCGACCAGTACCTGATCATTCCCGATATCTCCATCAGCAGCAGCGGTCCGGTGCTGAGT GTGCTGCTCTTTTCAAAAACGCCCATTGAGGATCTGGATGGCGCACAGGTGCTGCTCAGTTCGGAGTCAGCCACCTCCGT CAACCTGCTGAAAATCCTGCTCCGTATCCGTTACAACTGCCAATGTACCTTCCAGATAACCGATCAGAGCACCCCTGGTG CCATGGGCGGGAACGAGGCGATCCTTCTGATCGGTGACGCGGCTCTGCGCGCGACCATGAGCAGGCACGACATGTTTGTC TACGATCTGGGAGAACTCTGGTACCGGTGGACCGGCACCCCCTTTGTCTTTGCCCTCTGGCTGACCACTCGGGAGGTGGC GGGCAGACGGGGGGATGAGCTGATGAGACTTGCGCGACAGTTGGGCCATGCCAAACAGTATGCGGAAGAACATCTGGAGG AAATCGTTCGCGTATCGCCGGAGCGGGATTGGATGGGGCCTGAGTTGCTTTTGGACTACTGGAGGAACAATATATCCTAC GATCTGACGGATCTGCACCTGTCAGGATTGAAACGCTACTTCCGTTTCGCGGCGGAGATCGGCCTGATCGCGCCGGTGCG GGATCTCGCCTTTCTGCCCCTGGATTGA
Upstream 100 bases:
>100_bases CCATTACTCGTTTCCTGCAGGCGACGGGCCAACTACTCGACCAGGAGGGGGTCCGTTTCGTCGAGGGCGACGCTGACCGC CTCTACCTGAATATCTACTG
Downstream 100 bases:
>100_bases TTCCCGTGCCGTGACCATCTCGGGCTGATCATGGCTGGGCGCTGGGGTGGTCGAGCCGAGCAGGTAAAACAAAGGGGGAA TTCTCAGCGAATTCCCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLRIGRIEYANCTPLFHALNALFPENDYRYVGGVPAYLNGMLASGGIDVCPSSSITFATHSDQYLIIPDISISSSGPVLS VLLFSKTPIEDLDGAQVLLSSESATSVNLLKILLRIRYNCQCTFQITDQSTPGAMGGNEAILLIGDAALRATMSRHDMFV YDLGELWYRWTGTPFVFALWLTTREVAGRRGDELMRLARQLGHAKQYAEEHLEEIVRVSPERDWMGPELLLDYWRNNISY DLTDLHLSGLKRYFRFAAEIGLIAPVRDLAFLPLD
Sequences:
>Translated_275_residues MLRIGRIEYANCTPLFHALNALFPENDYRYVGGVPAYLNGMLASGGIDVCPSSSITFATHSDQYLIIPDISISSSGPVLS VLLFSKTPIEDLDGAQVLLSSESATSVNLLKILLRIRYNCQCTFQITDQSTPGAMGGNEAILLIGDAALRATMSRHDMFV YDLGELWYRWTGTPFVFALWLTTREVAGRRGDELMRLARQLGHAKQYAEEHLEEIVRVSPERDWMGPELLLDYWRNNISY DLTDLHLSGLKRYFRFAAEIGLIAPVRDLAFLPLD >Mature_275_residues MLRIGRIEYANCTPLFHALNALFPENDYRYVGGVPAYLNGMLASGGIDVCPSSSITFATHSDQYLIIPDISISSSGPVLS VLLFSKTPIEDLDGAQVLLSSESATSVNLLKILLRIRYNCQCTFQITDQSTPGAMGGNEAILLIGDAALRATMSRHDMFV YDLGELWYRWTGTPFVFALWLTTREVAGRRGDELMRLARQLGHAKQYAEEHLEEIVRVSPERDWMGPELLLDYWRNNISY DLTDLHLSGLKRYFRFAAEIGLIAPVRDLAFLPLD
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30841; Mature: 30841
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIGRIEYANCTPLFHALNALFPENDYRYVGGVPAYLNGMLASGGIDVCPSSSITFATH CCEECCEEECCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEC SDQYLIIPDISISSSGPVLSVLLFSKTPIEDLDGAQVLLSSESATSVNLLKILLRIRYNC CCCEEEEECCEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC QCTFQITDQSTPGAMGGNEAILLIGDAALRATMSRHDMFVYDLGELWYRWTGTPFVFALW EEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCEEEEEHHHHHEEECCCCEEEHHH LTTREVAGRRGDELMRLARQLGHAKQYAEEHLEEIVRVSPERDWMGPELLLDYWRNNISY HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCE DLTDLHLSGLKRYFRFAAEIGLIAPVRDLAFLPLD EHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCC >Mature Secondary Structure MLRIGRIEYANCTPLFHALNALFPENDYRYVGGVPAYLNGMLASGGIDVCPSSSITFATH CCEECCEEECCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEC SDQYLIIPDISISSSGPVLSVLLFSKTPIEDLDGAQVLLSSESATSVNLLKILLRIRYNC CCCEEEEECCEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC QCTFQITDQSTPGAMGGNEAILLIGDAALRATMSRHDMFVYDLGELWYRWTGTPFVFALW EEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCEEEEEHHHHHEEECCCCEEEHHH LTTREVAGRRGDELMRLARQLGHAKQYAEEHLEEIVRVSPERDWMGPELLLDYWRNNISY HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCE DLTDLHLSGLKRYFRFAAEIGLIAPVRDLAFLPLD EHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA