| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118580416
Identifier: 118580416
GI number: 118580416
Start: 2147394
End: 2148269
Strand: Reverse
Name: 118580416
Synonym: Ppro_2000
Alternate gene names: NA
Gene position: 2148269-2147394 (Counterclockwise)
Preceding gene: 118580417
Following gene: 118580415
Centisome position: 53.6
GC content: 56.16
Gene sequence:
>876_bases ATGAAGAAGATGTTCGTTTCCGCGCTGCTGTGTGCGCTGCTGGTCGTGCCTCAGATCGCATTGGCAGTGAACTCGCGGGA TTACATTCCGCTACCGCCCGACACGTTCCTCTTTTGCACCTATTTCAAACACATATCCGCAACTTCGTACTATGCGAACG GCAAGAAGGTGAGCAATGATTTCAATCTCACCGAAAATCTCGGCATTCTCAGGCCGGTGTACTACATGGATATCGGCAAG GCGCTCTACGGCGACGGCGGGTTCCGCATCGACCCCCAGGCGCTGATCCCCTTCGGCGAAGCCAACCTGGATGGCGCGGC CGTGGGCAACGCGGATATTTCCACGACGGGATTCGCCGATCCGACCGTTTTCGCGACCTTCTGGTTCGTCAACGATCCCA AGAACAAGTTGTGGGCCGGCTTCAGCCCCTACATAACCATGCCCCTGGGCGATTACGACCGGCACAAGGCGCTCAACCTG GGGAACAACCGCTGGGCGATCAAGCCGGAACTGGGCGTCGTCAAGGGTTTCGGGGAGAGGACCTACCTGGACATGATCGT CAATGGCGAGTTCTATACGGAAAACGAGAAGATCAATCTCAAGCAGGATCCGGTCTTCGGGGCTGAGGTTCATCTGAGCT ACGACATCACCAAGCAGTGGTACGCCTCGGTGGACTATTTCTACAGTTATGGCGGCGAGACGAAGCAAAACGGCGAGTGG CAGAACAACAAGGTCAACAGCCACGGCCTCGGTCTCTCGCTGTTCTGGATGATCGGAAGCAACAACCAGCTGATGGTTGA ATACCGTGATGACTTCTCGGTAAGGAACGGGCCGGGCACCAATACCTTTGGCGCCCGTTGGGCATACTTCTTTTGA
Upstream 100 bases:
>100_bases GTCGCGCAGGAGTGCCCCGCGCCCCTGCAATGGAATGAAAAGGGGATTCATCAGCGTCACTACCATTACATAACGATGAG ATTACTGGGGAGGTGTATCC
Downstream 100 bases:
>100_bases CCTCCGGCTGTCGCTCTGTGAAACAGATTTGACCGATTCAGGGGAAGGTGATGTAGGTTTCCGTCCTGCGTCCCGGCTCC TGGTGATGTCACTCCGCCAG
Product: putative signal peptide
Products: NA
Alternate protein names: Phenol Degradation; Quinohemoprotein Alcohol Dehydrogenase; Alcohol Dehydrogenase; QbdB Protein; Meta-Pathway Phenol Degradation-Like Protein; Signal Peptide-Containing Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKMFVSALLCALLVVPQIALAVNSRDYIPLPPDTFLFCTYFKHISATSYYANGKKVSNDFNLTENLGILRPVYYMDIGK ALYGDGGFRIDPQALIPFGEANLDGAAVGNADISTTGFADPTVFATFWFVNDPKNKLWAGFSPYITMPLGDYDRHKALNL GNNRWAIKPELGVVKGFGERTYLDMIVNGEFYTENEKINLKQDPVFGAEVHLSYDITKQWYASVDYFYSYGGETKQNGEW QNNKVNSHGLGLSLFWMIGSNNQLMVEYRDDFSVRNGPGTNTFGARWAYFF
Sequences:
>Translated_291_residues MKKMFVSALLCALLVVPQIALAVNSRDYIPLPPDTFLFCTYFKHISATSYYANGKKVSNDFNLTENLGILRPVYYMDIGK ALYGDGGFRIDPQALIPFGEANLDGAAVGNADISTTGFADPTVFATFWFVNDPKNKLWAGFSPYITMPLGDYDRHKALNL GNNRWAIKPELGVVKGFGERTYLDMIVNGEFYTENEKINLKQDPVFGAEVHLSYDITKQWYASVDYFYSYGGETKQNGEW QNNKVNSHGLGLSLFWMIGSNNQLMVEYRDDFSVRNGPGTNTFGARWAYFF >Mature_291_residues MKKMFVSALLCALLVVPQIALAVNSRDYIPLPPDTFLFCTYFKHISATSYYANGKKVSNDFNLTENLGILRPVYYMDIGK ALYGDGGFRIDPQALIPFGEANLDGAAVGNADISTTGFADPTVFATFWFVNDPKNKLWAGFSPYITMPLGDYDRHKALNL GNNRWAIKPELGVVKGFGERTYLDMIVNGEFYTENEKINLKQDPVFGAEVHLSYDITKQWYASVDYFYSYGGETKQNGEW QNNKVNSHGLGLSLFWMIGSNNQLMVEYRDDFSVRNGPGTNTFGARWAYFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32818; Mature: 32818
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMFVSALLCALLVVPQIALAVNSRDYIPLPPDTFLFCTYFKHISATSYYANGKKVSND CHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHEEHHHHHCCCEEECCCCEECCC FNLTENLGILRPVYYMDIGKALYGDGGFRIDPQALIPFGEANLDGAAVGNADISTTGFAD CCCCCCCCCCCEEHEEECCHHHCCCCCEEECCCEEEECCCCCCCCEEECCCCCCCCCCCC PTVFATFWFVNDPKNKLWAGFSPYITMPLGDYDRHKALNLGNNRWAIKPELGVVKGFGER CCEEEEEEEEECCCCCEECCCCCEEEEECCCCCCCCEEECCCCEEEECCCCCEEECCCCC TYLDMIVNGEFYTENEKINLKQDPVFGAEVHLSYDITKQWYASVDYFYSYGGETKQNGEW EEEEEEECCEEEECCCEEEEECCCCCCEEEEEEEECCHHHHHHHHEEEECCCCCCCCCCC QNNKVNSHGLGLSLFWMIGSNNQLMVEYRDDFSVRNGPGTNTFGARWAYFF CCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MKKMFVSALLCALLVVPQIALAVNSRDYIPLPPDTFLFCTYFKHISATSYYANGKKVSND CHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHEEHHHHHCCCEEECCCCEECCC FNLTENLGILRPVYYMDIGKALYGDGGFRIDPQALIPFGEANLDGAAVGNADISTTGFAD CCCCCCCCCCCEEHEEECCHHHCCCCCEEECCCEEEECCCCCCCCEEECCCCCCCCCCCC PTVFATFWFVNDPKNKLWAGFSPYITMPLGDYDRHKALNLGNNRWAIKPELGVVKGFGER CCEEEEEEEEECCCCCEECCCCCEEEEECCCCCCCCEEECCCCEEEECCCCCEEECCCCC TYLDMIVNGEFYTENEKINLKQDPVFGAEVHLSYDITKQWYASVDYFYSYGGETKQNGEW EEEEEEECCEEEECCCEEEEECCCCCCEEEEEEEECCHHHHHHHHEEEECCCCCCCCCCC QNNKVNSHGLGLSLFWMIGSNNQLMVEYRDDFSVRNGPGTNTFGARWAYFF CCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA