| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580358
Identifier: 118580358
GI number: 118580358
Start: 2092004
End: 2092837
Strand: Direct
Name: 118580358
Synonym: Ppro_1941
Alternate gene names: NA
Gene position: 2092004-2092837 (Clockwise)
Preceding gene: 118580357
Following gene: 118580359
Centisome position: 52.2
GC content: 60.55
Gene sequence:
>834_bases ATGATGAAGCGAGCGGGATTAGTGGTGGCGGCATCCGCGCTGCTGGGAGGAATCGGGCAGGCCGCGGAGCCGGTAACGAA CCTGGGTGTGGACGAACTGGTGAGAAAAAGCAATCACATGGCCCTGTATCAGGGGACGGACGGCCGCGGCAGGGTCAGCA TGCTGATTACTGACAACCAGGGGCGCACGCGCAGGAGGGAATTCACCATGCTGCGCCGGGATGTGGGGGATAATGATCAA GACCAGAGCTATTTCGTGCTGTTCAACGAACCGCCGGATGTGCGCAGGATGGTCTTCATGGTTCACAAGCATGCCGCGCC GGGGAGGGAAGATGACCGCTGGCTCTACCTGCCCGGCCTGGACCTGGTCAAGCGCATCGCGGCCAGCGACAAGCGCACCA GTTTTGCCGGCTCCGACTTCCTCTACGAGGACATTTCCGGCCGGAACATCACCGAAGACAGGCACGAGCTGCTGCGAACC ACGGACAGGCACCATGTGCTGAAGAACACCCCCAGAAAGCCCGGTAGCGTGGAGTTTGCCTACTATCTGGCATACCTGGA CAAAAAGAGCCTCATGCCGGTGAAACTGGAGTTCTACAAGAAACCTGAACGGCTCTACCGGGTGATCGAGGTACTGCGCA TGGAAGAGATCCAGGCCCGGCAGGGAGAACGGCGGGTGGTCTATCCCACGGTCACGCGCAGCGTTGCCCGGAACCTGGAT ACGGGCAGCCGGACCGAGATGGTCTTTTCCCATATCGGTTACAACGGCGGCCTCAAGGAGGAGCTGTTCAGCGAGCGCTA CCTGAGAAAACCGCCCCGAGAAGCGCTGCGATGA
Upstream 100 bases:
>100_bases CGAGCATAACAACAGGGGACGGCTCCATGGTCTTGCCACGCATCCTTTGGTTTCGCGTAAAGGCAGTCGAAGCGGAGCTC GTCCGGAAAGGGAGAAGACG
Downstream 100 bases:
>100_bases GCCTGACCCGTCTCATGGGCGCGATTCCCGGCGCAGCCGTCGCGCTCTTCCTGATCTCGCCCCCCTCCCCCGCCGCCGGG GCCTTTCCGGGGGCGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein-Sorting Protein; EppA_BapA Family Protein; Von Willebrand Factor Type A; RND Efflux Transporter; Sigma E Regulatory Protein MucB/RseB
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MMKRAGLVVAASALLGGIGQAAEPVTNLGVDELVRKSNHMALYQGTDGRGRVSMLITDNQGRTRRREFTMLRRDVGDNDQ DQSYFVLFNEPPDVRRMVFMVHKHAAPGREDDRWLYLPGLDLVKRIAASDKRTSFAGSDFLYEDISGRNITEDRHELLRT TDRHHVLKNTPRKPGSVEFAYYLAYLDKKSLMPVKLEFYKKPERLYRVIEVLRMEEIQARQGERRVVYPTVTRSVARNLD TGSRTEMVFSHIGYNGGLKEELFSERYLRKPPREALR
Sequences:
>Translated_277_residues MMKRAGLVVAASALLGGIGQAAEPVTNLGVDELVRKSNHMALYQGTDGRGRVSMLITDNQGRTRRREFTMLRRDVGDNDQ DQSYFVLFNEPPDVRRMVFMVHKHAAPGREDDRWLYLPGLDLVKRIAASDKRTSFAGSDFLYEDISGRNITEDRHELLRT TDRHHVLKNTPRKPGSVEFAYYLAYLDKKSLMPVKLEFYKKPERLYRVIEVLRMEEIQARQGERRVVYPTVTRSVARNLD TGSRTEMVFSHIGYNGGLKEELFSERYLRKPPREALR >Mature_277_residues MMKRAGLVVAASALLGGIGQAAEPVTNLGVDELVRKSNHMALYQGTDGRGRVSMLITDNQGRTRRREFTMLRRDVGDNDQ DQSYFVLFNEPPDVRRMVFMVHKHAAPGREDDRWLYLPGLDLVKRIAASDKRTSFAGSDFLYEDISGRNITEDRHELLRT TDRHHVLKNTPRKPGSVEFAYYLAYLDKKSLMPVKLEFYKKPERLYRVIEVLRMEEIQARQGERRVVYPTVTRSVARNLD TGSRTEMVFSHIGYNGGLKEELFSERYLRKPPREALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31993; Mature: 31993
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRAGLVVAASALLGGIGQAAEPVTNLGVDELVRKSNHMALYQGTDGRGRVSMLITDNQ CCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCEEEEEEECCC GRTRRREFTMLRRDVGDNDQDQSYFVLFNEPPDVRRMVFMVHKHAAPGREDDRWLYLPGL CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCH DLVKRIAASDKRTSFAGSDFLYEDISGRNITEDRHELLRTTDRHHVLKNTPRKPGSVEFA HHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH YYLAYLDKKSLMPVKLEFYKKPERLYRVIEVLRMEEIQARQGERRVVYPTVTRSVARNLD HHEEHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCC TGSRTEMVFSHIGYNGGLKEELFSERYLRKPPREALR CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MMKRAGLVVAASALLGGIGQAAEPVTNLGVDELVRKSNHMALYQGTDGRGRVSMLITDNQ CCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCEEEEEEECCC GRTRRREFTMLRRDVGDNDQDQSYFVLFNEPPDVRRMVFMVHKHAAPGREDDRWLYLPGL CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCH DLVKRIAASDKRTSFAGSDFLYEDISGRNITEDRHELLRTTDRHHVLKNTPRKPGSVEFA HHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH YYLAYLDKKSLMPVKLEFYKKPERLYRVIEVLRMEEIQARQGERRVVYPTVTRSVARNLD HHEEHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCC TGSRTEMVFSHIGYNGGLKEELFSERYLRKPPREALR CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA