| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is ucpA [C]
Identifier: 118580280
GI number: 118580280
Start: 2004470
End: 2005228
Strand: Reverse
Name: ucpA [C]
Synonym: Ppro_1861
Alternate gene names: 118580280
Gene position: 2005228-2004470 (Counterclockwise)
Preceding gene: 118580281
Following gene: 118580279
Centisome position: 50.03
GC content: 49.8
Gene sequence:
>759_bases ATGGACAAGCCACTTACAGGTAAGACTGCAATTGTAACCGGTGCCAGCTCCGGTATTGGATACGCTACTGCTATTACATT AGCTCGTGCAGGCGCTGCCGTGGTGTCAAACGCCCGGCGCAAAGACCGACTGGATAAGTTGGTAGAGGAAATAACTGCTC AAGGAGGAAAAGCACTCGCGGTTGCAGGTGATGCGGGAAGTCAGGAGGATATTGACCTGCTGCTTGAACAGACTTTGACT TGGAAAGAGAGCGGCGGCAAGTATGATATTGTCGTTGCAAACGCTGGTCGTGGACTGGCAGGTGGCATCCTTGACAGTGA TGACTCACAGTGGCAGGAATTATACCAGACCAACGTAATCGGTGTGGCCAGCCTGATACGACGGGTAGGTCAATATATGG CTCAACAGAAAAGCGGCGATATTGTGGTCATTGGTTCGGTCGTGGGGAAAAATATTTCTCCATATAGCGGTTTTTACGGT TCCAGTAAATTTGCAGTCGGTGCTCTTACCGAAGCACTGCGCCGCGAGATTTGCCAGTACGGGGTACGTGTTTCCTTGGT AATGCCGGGAATTGTGACCAGTGGATTTCAGGAAGTGGCCGGATATAATCAGGAAAACTTTGGTAAATCAATTGCCCAGT TCGGGAAAGTACTCGAACCTCAGGCTATTGCCGATAGTATCCACTGGCTGCTTACTCTGCCGCCTCATGTGAACATCAAT GAAATTATGGTTCGCCCCACAGGCCAGAGTTTTCCATAA
Upstream 100 bases:
>100_bases GGTCGGTGTCCCAACCGGTGAAGACAAGCCGAAGGACAAATTCCAAAAGGATAAAATTCACTGGGGAAAATGGTAAGCTA TTCAAAAAGGAGAATTTTAT
Downstream 100 bases:
>100_bases CCCCATATCAGAAGGAATTATAAATGCTCGATTTCATAGTGAACCATCAGACATGTACAAAGTGCGGCCAGTGTGTCACC GATTGTCTGGCGACAATCAT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MDKPLTGKTAIVTGASSGIGYATAITLARAGAAVVSNARRKDRLDKLVEEITAQGGKALAVAGDAGSQEDIDLLLEQTLT WKESGGKYDIVVANAGRGLAGGILDSDDSQWQELYQTNVIGVASLIRRVGQYMAQQKSGDIVVIGSVVGKNISPYSGFYG SSKFAVGALTEALRREICQYGVRVSLVMPGIVTSGFQEVAGYNQENFGKSIAQFGKVLEPQAIADSIHWLLTLPPHVNIN EIMVRPTGQSFP
Sequences:
>Translated_252_residues MDKPLTGKTAIVTGASSGIGYATAITLARAGAAVVSNARRKDRLDKLVEEITAQGGKALAVAGDAGSQEDIDLLLEQTLT WKESGGKYDIVVANAGRGLAGGILDSDDSQWQELYQTNVIGVASLIRRVGQYMAQQKSGDIVVIGSVVGKNISPYSGFYG SSKFAVGALTEALRREICQYGVRVSLVMPGIVTSGFQEVAGYNQENFGKSIAQFGKVLEPQAIADSIHWLLTLPPHVNIN EIMVRPTGQSFP >Mature_252_residues MDKPLTGKTAIVTGASSGIGYATAITLARAGAAVVSNARRKDRLDKLVEEITAQGGKALAVAGDAGSQEDIDLLLEQTLT WKESGGKYDIVVANAGRGLAGGILDSDDSQWQELYQTNVIGVASLIRRVGQYMAQQKSGDIVVIGSVVGKNISPYSGFYG SSKFAVGALTEALRREICQYGVRVSLVMPGIVTSGFQEVAGYNQENFGKSIAQFGKVLEPQAIADSIHWLLTLPPHVNIN EIMVRPTGQSFP
Specific function: Unknown
COG id: COG4221
COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI109715829, Length=251, Percent_Identity=32.2709163346614, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI5031737, Length=232, Percent_Identity=30.1724137931034, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=31.6326530612245, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI32483357, Length=232, Percent_Identity=28.448275862069, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI7657478, Length=233, Percent_Identity=30.4721030042918, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=30.3030303030303, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI7706318, Length=229, Percent_Identity=30.5676855895196, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI32455239, Length=256, Percent_Identity=28.515625, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI5031765, Length=256, Percent_Identity=28.515625, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4503817, Length=236, Percent_Identity=28.8135593220339, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI223718074, Length=209, Percent_Identity=28.7081339712919, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=30.4812834224599, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI210032110, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI126723750, Length=209, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI142976729, Length=234, Percent_Identity=26.4957264957265, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI209862901, Length=201, Percent_Identity=28.8557213930348, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI19923983, Length=201, Percent_Identity=28.8557213930348, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI40254992, Length=229, Percent_Identity=26.6375545851528, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI19923817, Length=240, Percent_Identity=25.4166666666667, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4557649, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI4504505, Length=242, Percent_Identity=26.4462809917355, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI87082100, Length=227, Percent_Identity=31.2775330396476, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787820, Length=248, Percent_Identity=29.8387096774194, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1786701, Length=236, Percent_Identity=30.0847457627119, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787335, Length=224, Percent_Identity=29.4642857142857, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787905, Length=229, Percent_Identity=31.0043668122271, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI87082160, Length=190, Percent_Identity=31.5789473684211, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790717, Length=190, Percent_Identity=26.8421052631579, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789378, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788459, Length=190, Percent_Identity=27.8947368421053, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI2367365, Length=229, Percent_Identity=26.2008733624454, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1789208, Length=204, Percent_Identity=25.9803921568627, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17562906, Length=245, Percent_Identity=33.469387755102, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17562908, Length=246, Percent_Identity=32.9268292682927, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562990, Length=241, Percent_Identity=31.5352697095436, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560220, Length=242, Percent_Identity=31.404958677686, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17531453, Length=243, Percent_Identity=30.8641975308642, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI193204405, Length=245, Percent_Identity=31.0204081632653, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17560676, Length=233, Percent_Identity=27.4678111587983, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560150, Length=242, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI72000259, Length=242, Percent_Identity=29.7520661157025, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562910, Length=243, Percent_Identity=30.0411522633745, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538486, Length=211, Percent_Identity=32.2274881516588, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17559104, Length=240, Percent_Identity=30.8333333333333, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994604, Length=230, Percent_Identity=29.5652173913043, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562904, Length=243, Percent_Identity=28.3950617283951, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561402, Length=235, Percent_Identity=28.936170212766, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17563726, Length=244, Percent_Identity=27.4590163934426, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538480, Length=248, Percent_Identity=28.6290322580645, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560332, Length=205, Percent_Identity=32.6829268292683, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17551412, Length=208, Percent_Identity=31.7307692307692, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71994600, Length=233, Percent_Identity=27.8969957081545, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17544670, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=30.8080808080808, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71997099, Length=207, Percent_Identity=28.9855072463768, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565030, Length=211, Percent_Identity=30.3317535545024, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=28.0612244897959, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71997402, Length=194, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17570069, Length=192, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI115534694, Length=195, Percent_Identity=30.2564102564103, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=256, Percent_Identity=30.859375, Blast_Score=112, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6322067, Length=177, Percent_Identity=31.0734463276836, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI116007236, Length=253, Percent_Identity=32.4110671936759, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24641232, Length=259, Percent_Identity=31.6602316602317, Blast_Score=118, Evalue=3e-27, Organism=Drosophila melanogaster, GI24648944, Length=247, Percent_Identity=31.5789473684211, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24663911, Length=257, Percent_Identity=31.5175097276265, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI281364494, Length=257, Percent_Identity=31.1284046692607, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21355319, Length=205, Percent_Identity=32.1951219512195, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21357041, Length=230, Percent_Identity=33.9130434782609, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI24648693, Length=256, Percent_Identity=30.46875, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355889, Length=256, Percent_Identity=30.46875, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI116007234, Length=255, Percent_Identity=31.7647058823529, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24641388, Length=264, Percent_Identity=31.4393939393939, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI116007238, Length=205, Percent_Identity=33.6585365853659, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI28571387, Length=262, Percent_Identity=29.7709923664122, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644339, Length=207, Percent_Identity=32.8502415458937, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI23397609, Length=234, Percent_Identity=32.0512820512821, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571526, Length=203, Percent_Identity=32.0197044334975, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=28.8617886178862, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24580925, Length=201, Percent_Identity=32.3383084577114, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24640492, Length=215, Percent_Identity=26.9767441860465, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI116007232, Length=189, Percent_Identity=33.8624338624339, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI161076933, Length=230, Percent_Identity=29.5652173913043, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584748, Length=230, Percent_Identity=29.5652173913043, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358495, Length=248, Percent_Identity=25, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574402, Length=192, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584752, Length=196, Percent_Identity=32.6530612244898, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644337, Length=239, Percent_Identity=27.1966527196653, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26688; Mature: 26688
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPLTGKTAIVTGASSGIGYATAITLARAGAAVVSNARRKDRLDKLVEEITAQGGKALA CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VAGDAGSQEDIDLLLEQTLTWKESGGKYDIVVANAGRGLAGGILDSDDSQWQELYQTNVI EECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCHH GVASLIRRVGQYMAQQKSGDIVVIGSVVGKNISPYSGFYGSSKFAVGALTEALRREICQY HHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GVRVSLVMPGIVTSGFQEVAGYNQENFGKSIAQFGKVLEPQAIADSIHWLLTLPPHVNIN CCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCC EIMVRPTGQSFP EEEEECCCCCCC >Mature Secondary Structure MDKPLTGKTAIVTGASSGIGYATAITLARAGAAVVSNARRKDRLDKLVEEITAQGGKALA CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VAGDAGSQEDIDLLLEQTLTWKESGGKYDIVVANAGRGLAGGILDSDDSQWQELYQTNVI EECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCHH GVASLIRRVGQYMAQQKSGDIVVIGSVVGKNISPYSGFYGSSKFAVGALTEALRREICQY HHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GVRVSLVMPGIVTSGFQEVAGYNQENFGKSIAQFGKVLEPQAIADSIHWLLTLPPHVNIN CCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCC EIMVRPTGQSFP EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]