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The map label for this gene is insD1 [C]

Identifier: 118580261

GI number: 118580261

Start: 1981586

End: 1982491

Strand: Reverse

Name: insD1 [C]

Synonym: Ppro_1841

Alternate gene names: 118580261

Gene position: 1982491-1981586 (Counterclockwise)

Preceding gene: 118580262

Following gene: 118580255

Centisome position: 49.46

GC content: 51.55

Gene sequence:

>906_bases
TTGTCGGTTGCAAAGAGCAAGTTCTACGCTTGGATCGAGCGTTACGGTAAAGCTAACGAACACAACGCCCCGATTCCTCG
TGATTTCTGGCTTGAGGAATGGGAGCGGGAAGCCATCATTCAGTTTGCAGTGGACAACCCGCTTGAAGGATACCGGCGAC
TAACCTTCATGATGCTGGATCGGGACATTGTGGCCGTCAGTCCTTCCAGCACCTGGCGTGTTCTTTCAAAAGCAGGTCTG
CTCCAGAAATGGAACAAGAAGAAGAGCCTCAAGGGCACCGGCTTCGTACAGCCGCTCAAACCACATGAGCACTGGCATGT
GGATGTGTCCTACATCAACATCTGCGGCACCTTCTATTATCTGTGCAGCCTTCTGGACGGATGCAGTCGCTACATCGTCC
ACTGGGAGATCAGGGAACAGATGACGGAAAAGGACGTGGAAATCATCATGCAGCGAGCCAAGGAGAAATTCCCCAATGCC
CGACCACGAGTTATTTCCGACAACGGGCCACAGTTCATTGCCAAGGATTTCAAGGAGTTCATTCGCGTTTCCGGCATGAC
CCATGTAAAGACAGCACCATTCTACCCGCAGTCGAACGGCAAATTGGAACGCTTCCATGGAACCATCAAAGACGAATGCA
TCCGTCCCGGCGTGCCGCTTTCACTTGACGATGCCCGCAGGATGACTGAGAAATACATTGAGCACTACAACAATGTCAAG
TTGCACAGCGCTATCGGCTACATTGCCCCGGCTGACAAACTGGCTGGCAGAGACCGGGAAATATTCAAAGAGCGAGACAG
GAAACTGGAAGAAGCCAGAGAACTGAGAAAGCAGAAACGACAGCAAGCCTTTTCTAAAATCAATCATTCAGGGAAAGCCG
ACCTGCCATTAGATCAAGCGGCCTGA

Upstream 100 bases:

>100_bases
CGGCAGCTGGGTTCCCCATGACATACGTGATGCTGTCGTTGACTACACCAGGCTATGGAGCGACAAGACCGGGATACCGC
TGAAACGCTTCATATCCTGG

Downstream 100 bases:

>100_bases
AAGTCCATTTCCGACTGAGGCGGGACAAGATCACCGGCGGTTTAAGGCCGGTGAATCTTCCTTGTTTGACTTATTCGTGC
CAATTTGTGTTTCTACATTT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSVAKSKFYAWIERYGKANEHNAPIPRDFWLEEWEREAIIQFAVDNPLEGYRRLTFMMLDRDIVAVSPSSTWRVLSKAGL
LQKWNKKKSLKGTGFVQPLKPHEHWHVDVSYINICGTFYYLCSLLDGCSRYIVHWEIREQMTEKDVEIIMQRAKEKFPNA
RPRVISDNGPQFIAKDFKEFIRVSGMTHVKTAPFYPQSNGKLERFHGTIKDECIRPGVPLSLDDARRMTEKYIEHYNNVK
LHSAIGYIAPADKLAGRDREIFKERDRKLEEARELRKQKRQQAFSKINHSGKADLPLDQAA

Sequences:

>Translated_301_residues
MSVAKSKFYAWIERYGKANEHNAPIPRDFWLEEWEREAIIQFAVDNPLEGYRRLTFMMLDRDIVAVSPSSTWRVLSKAGL
LQKWNKKKSLKGTGFVQPLKPHEHWHVDVSYINICGTFYYLCSLLDGCSRYIVHWEIREQMTEKDVEIIMQRAKEKFPNA
RPRVISDNGPQFIAKDFKEFIRVSGMTHVKTAPFYPQSNGKLERFHGTIKDECIRPGVPLSLDDARRMTEKYIEHYNNVK
LHSAIGYIAPADKLAGRDREIFKERDRKLEEARELRKQKRQQAFSKINHSGKADLPLDQAA
>Mature_300_residues
SVAKSKFYAWIERYGKANEHNAPIPRDFWLEEWEREAIIQFAVDNPLEGYRRLTFMMLDRDIVAVSPSSTWRVLSKAGLL
QKWNKKKSLKGTGFVQPLKPHEHWHVDVSYINICGTFYYLCSLLDGCSRYIVHWEIREQMTEKDVEIIMQRAKEKFPNAR
PRVISDNGPQFIAKDFKEFIRVSGMTHVKTAPFYPQSNGKLERFHGTIKDECIRPGVPLSLDDARRMTEKYIEHYNNVKL
HSAIGYIAPADKLAGRDREIFKERDRKLEEARELRKQKRQQAFSKINHSGKADLPLDQAA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789424, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789224, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788305, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787669, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786558, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789981, Length=216, Percent_Identity=22.6851851851852, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 35186; Mature: 35055

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAKSKFYAWIERYGKANEHNAPIPRDFWLEEWEREAIIQFAVDNPLEGYRRLTFMMLD
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
RDIVAVSPSSTWRVLSKAGLLQKWNKKKSLKGTGFVQPLKPHEHWHVDVSYINICGTFYY
CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
LCSLLDGCSRYIVHWEIREQMTEKDVEIIMQRAKEKFPNARPRVISDNGPQFIAKDFKEF
HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHH
IRVSGMTHVKTAPFYPQSNGKLERFHGTIKDECIRPGVPLSLDDARRMTEKYIEHYNNVK
HHHCCCCEEECCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEE
LHSAIGYIAPADKLAGRDREIFKERDRKLEEARELRKQKRQQAFSKINHSGKADLPLDQA
HHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
A
C
>Mature Secondary Structure 
SVAKSKFYAWIERYGKANEHNAPIPRDFWLEEWEREAIIQFAVDNPLEGYRRLTFMMLD
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
RDIVAVSPSSTWRVLSKAGLLQKWNKKKSLKGTGFVQPLKPHEHWHVDVSYINICGTFYY
CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
LCSLLDGCSRYIVHWEIREQMTEKDVEIIMQRAKEKFPNARPRVISDNGPQFIAKDFKEF
HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHH
IRVSGMTHVKTAPFYPQSNGKLERFHGTIKDECIRPGVPLSLDDARRMTEKYIEHYNNVK
HHHCCCCEEECCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEE
LHSAIGYIAPADKLAGRDREIFKERDRKLEEARELRKQKRQQAFSKINHSGKADLPLDQA
HHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152895 [H]