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The map label for this gene is crp [H]

Identifier: 118580255

GI number: 118580255

Start: 1975422

End: 1976174

Strand: Reverse

Name: crp [H]

Synonym: Ppro_1835

Alternate gene names: 118580255

Gene position: 1976174-1975422 (Counterclockwise)

Preceding gene: 118580261

Following gene: 118580247

Centisome position: 49.31

GC content: 58.17

Gene sequence:

>753_bases
ATGATCAAGAGCAGATTCGACCATGAACTGGCGAAGAAGATCGTCAGGGCGGTGCCCCTGTTTGCCGGTTTCAGCGACCA
GCAGCTTTCATCCCTGCTGGAGAAATCCAGCGTCTACGCATATGACAGGGATGAGGTCATCATGATGGCCGGCGAAGAGG
CCCGGCAGATGTACATCGTCCTCAAGGGACAGGTCAGGGTGGTGGATCTCACTGCTGACGGCCAGGAACGGGTCATGGCC
TTCCGCCATCGCGGCGATTGCTTCGGCGACGTGGGGCTGCTGGACGGAAAGAGCGATTCCGCCACGGTGATCGCCAACGA
ACCGTGCCGGGTGCTCCTGATTTCAAAAGCCGTGTTTGACGCATGTTTTCTGGAGGAGAGGGATGCACTGCTGCAGGTCA
TCGCGGTGCTCTGCGGCCGTCTGCGCGAGAGTTGGCTGTTTCACTGCATCATAGGAATCAACGACGCCGAGTCCAAGATC
AGGGCAACCCTGTCCCATTACAGCAAGACCTTGGGTGTGCGGGACACCGATGGCGTAATCATCAACGCCACCCTGTCGCA
TCAGAGCATCGCCGACCGCGTCCACATCACCCGCGAAACCGTCAGCCGCGTGCTGCGCAAGATGCGCAACAAGCATGAGA
TCGAAATGGTGGGCCGCCGCTTCAAACTGCTTCCCCTGTTCTTCGAAACCTATGAGAAGAGCGACCTGTTCAGGGCGCTC
AAGGCCGATCTTGACAACCATCTGGAGCTATAA

Upstream 100 bases:

>100_bases
GATGACGGCTGAATGCGTTAAGCCCGACAGACTCCTAGCCAGGTAACGCGGTAAAGCGGGAACGGAGAGAGCCTTTTCCC
CATACAAGGAGCAAACAGAG

Downstream 100 bases:

>100_bases
CATTCTCCGGATGACCAGTATCAGAAGAGTTCCACCTCTCCCGTCCTGATGTCTGACTCCTCAACCAGTCCGTCTCTGAG
CAGCTTTTCGAAAAAACAGA

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: cAMP receptor protein; cAMP regulatory protein [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIKSRFDHELAKKIVRAVPLFAGFSDQQLSSLLEKSSVYAYDRDEVIMMAGEEARQMYIVLKGQVRVVDLTADGQERVMA
FRHRGDCFGDVGLLDGKSDSATVIANEPCRVLLISKAVFDACFLEERDALLQVIAVLCGRLRESWLFHCIIGINDAESKI
RATLSHYSKTLGVRDTDGVIINATLSHQSIADRVHITRETVSRVLRKMRNKHEIEMVGRRFKLLPLFFETYEKSDLFRAL
KADLDNHLEL

Sequences:

>Translated_250_residues
MIKSRFDHELAKKIVRAVPLFAGFSDQQLSSLLEKSSVYAYDRDEVIMMAGEEARQMYIVLKGQVRVVDLTADGQERVMA
FRHRGDCFGDVGLLDGKSDSATVIANEPCRVLLISKAVFDACFLEERDALLQVIAVLCGRLRESWLFHCIIGINDAESKI
RATLSHYSKTLGVRDTDGVIINATLSHQSIADRVHITRETVSRVLRKMRNKHEIEMVGRRFKLLPLFFETYEKSDLFRAL
KADLDNHLEL
>Mature_250_residues
MIKSRFDHELAKKIVRAVPLFAGFSDQQLSSLLEKSSVYAYDRDEVIMMAGEEARQMYIVLKGQVRVVDLTADGQERVMA
FRHRGDCFGDVGLLDGKSDSATVIANEPCRVLLISKAVFDACFLEERDALLQVIAVLCGRLRESWLFHCIIGINDAESKI
RATLSHYSKTLGVRDTDGVIINATLSHQSIADRVHITRETVSRVLRKMRNKHEIEMVGRRFKLLPLFFETYEKSDLFRAL
KADLDNHLEL

Specific function: This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789756, Length=197, Percent_Identity=27.4111675126904, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 28416; Mature: 28416

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSRFDHELAKKIVRAVPLFAGFSDQQLSSLLEKSSVYAYDRDEVIMMAGEEARQMYIV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCEEEEECCCCEEEEEE
LKGQVRVVDLTADGQERVMAFRHRGDCFGDVGLLDGKSDSATVIANEPCRVLLISKAVFD
EECCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHH
ACFLEERDALLQVIAVLCGRLRESWLFHCIIGINDAESKIRATLSHYSKTLGVRDTDGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEE
INATLSHQSIADRVHITRETVSRVLRKMRNKHEIEMVGRRFKLLPLFFETYEKSDLFRAL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KADLDNHLEL
HHHHHHCCCC
>Mature Secondary Structure
MIKSRFDHELAKKIVRAVPLFAGFSDQQLSSLLEKSSVYAYDRDEVIMMAGEEARQMYIV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCEEEEECCCCEEEEEE
LKGQVRVVDLTADGQERVMAFRHRGDCFGDVGLLDGKSDSATVIANEPCRVLLISKAVFD
EECCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHH
ACFLEERDALLQVIAVLCGRLRESWLFHCIIGINDAESKIRATLSHYSKTLGVRDTDGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEE
INATLSHQSIADRVHITRETVSRVLRKMRNKHEIEMVGRRFKLLPLFFETYEKSDLFRAL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KADLDNHLEL
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]