| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is tgt [H]
Identifier: 118580220
GI number: 118580220
Start: 1926124
End: 1927248
Strand: Reverse
Name: tgt [H]
Synonym: Ppro_1800
Alternate gene names: 118580220
Gene position: 1927248-1926124 (Counterclockwise)
Preceding gene: 118580221
Following gene: 118580219
Centisome position: 48.09
GC content: 60.98
Gene sequence:
>1125_bases TTGTCGACTTCTCTTTTCACACTCCTTCACCGGGATGCCTCCTGCGGGGCGCGGCTTGGCAGCCTGAATACCCTGCACGG CGCCATTGAGACCCCCATCTTCATGCCGGTGGGTACCAACGCCACCGTCAAGGCCATGACTCCCGATGATCTGCTGGCGG TCAACGCCCAGATCATCCTCTCCAACACCTACCACCTCTACCTCCGTCCGGGGCACCGACTGGTGGAGCAGTTGGGCGGG TTGCACTCCTTCATGAACTGGCACCGCCCGATCCTGACCGACAGCGGCGGATTCCAGGTCTTCAGCCTGGGGGAGTTGCG CAAGATCAGCGAGGAAGGGGTCAGGTTCCAGTCCCATCTGGACGGTTCCTATCACTTCCTGACCCCGGAACTGTCCATAG GGATCCAGGAGGCGTTGGGTGCGGATATCATCATGTGCTTCGACGAGTGCCCCCCGGCCACGGCGGAGTACGACTACGTC AGCCGCTCCCTGGAGATGACCACCCGCTGGGCAAGGCGCTGCAAACAGGCCCACCGGCGTGAGGGACAGCAGTTGTTCGG CATCATTCAGGGGGGAATGCATTACGACCTGCGTGCCCGCAGCCTGGAGCAGATCTTTGAGATCGGCTTTGACGGCTATG CTTTGGGCGGCCTCTCGGTGGGTGAGGAAAAAGAACAGATGTACGGCGTCATGGAGGCCTGCGCCCCGCTGATGCCACAG GACCATCCCCGCTACATCATGGGCATCGGCGCCCCCCAGGACCTGGTGGAGGCGGTCTGGCACGGCTACGACATGTTCGA TTGCGTCATGCCGACCCGCAACGCCCGCAACGGCATGCTCTTCACCAGCCAGGGGCGGATCAACATCAAGGCCAAGATCT TTGAAGAGGATTCCGGACCGCTGGACCCGGAGTGCGGCTGCCACGTCTGCAGGAACTACTCCCGCGCCTATCTGCGGCAC CTCTACCGGGCGGGCGAAATCCTGGCCTCGAACCTGAACACCTATCACAACCTGTACTATTTCCTCGACCTGATGCGCCA GATGCGCGAGGCGATCAAAAACGACAACCTGGCGGGATTCCGCCGCGAGTTTTACGCAAAGCAGCAGATACATCATAAAA TTTAG
Upstream 100 bases:
>100_bases TGACCCCCCCTGTGATGAAAAGGGGGAGAACGTGTCTCCAACCAGTCTATAGATCTTGTGACGTAAATAAAGCTGTACCA TTGTCTTCCACGGGTGCTTA
Downstream 100 bases:
>100_bases TAAGTTAAGGAGGTTTGTTCTATGTTAGGATTAGCATTTGCCATGTCGGGCCCGCCGGGCGGGGCAACGGGAGCCGGCGG TGCAGCTGGCGCGTTTCAGC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSTSLFTLLHRDASCGARLGSLNTLHGAIETPIFMPVGTNATVKAMTPDDLLAVNAQIILSNTYHLYLRPGHRLVEQLGG LHSFMNWHRPILTDSGGFQVFSLGELRKISEEGVRFQSHLDGSYHFLTPELSIGIQEALGADIIMCFDECPPATAEYDYV SRSLEMTTRWARRCKQAHRREGQQLFGIIQGGMHYDLRARSLEQIFEIGFDGYALGGLSVGEEKEQMYGVMEACAPLMPQ DHPRYIMGIGAPQDLVEAVWHGYDMFDCVMPTRNARNGMLFTSQGRINIKAKIFEEDSGPLDPECGCHVCRNYSRAYLRH LYRAGEILASNLNTYHNLYYFLDLMRQMREAIKNDNLAGFRREFYAKQQIHHKI
Sequences:
>Translated_374_residues MSTSLFTLLHRDASCGARLGSLNTLHGAIETPIFMPVGTNATVKAMTPDDLLAVNAQIILSNTYHLYLRPGHRLVEQLGG LHSFMNWHRPILTDSGGFQVFSLGELRKISEEGVRFQSHLDGSYHFLTPELSIGIQEALGADIIMCFDECPPATAEYDYV SRSLEMTTRWARRCKQAHRREGQQLFGIIQGGMHYDLRARSLEQIFEIGFDGYALGGLSVGEEKEQMYGVMEACAPLMPQ DHPRYIMGIGAPQDLVEAVWHGYDMFDCVMPTRNARNGMLFTSQGRINIKAKIFEEDSGPLDPECGCHVCRNYSRAYLRH LYRAGEILASNLNTYHNLYYFLDLMRQMREAIKNDNLAGFRREFYAKQQIHHKI >Mature_373_residues STSLFTLLHRDASCGARLGSLNTLHGAIETPIFMPVGTNATVKAMTPDDLLAVNAQIILSNTYHLYLRPGHRLVEQLGGL HSFMNWHRPILTDSGGFQVFSLGELRKISEEGVRFQSHLDGSYHFLTPELSIGIQEALGADIIMCFDECPPATAEYDYVS RSLEMTTRWARRCKQAHRREGQQLFGIIQGGMHYDLRARSLEQIFEIGFDGYALGGLSVGEEKEQMYGVMEACAPLMPQD HPRYIMGIGAPQDLVEAVWHGYDMFDCVMPTRNARNGMLFTSQGRINIKAKIFEEDSGPLDPECGCHVCRNYSRAYLRHL YRAGEILASNLNTYHNLYYFLDLMRQMREAIKNDNLAGFRREFYAKQQIHHKI
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=349, Percent_Identity=46.4183381088825, Blast_Score=322, Evalue=3e-88, Organism=Homo sapiens, GI13375872, Length=278, Percent_Identity=24.8201438848921, Blast_Score=98, Evalue=1e-20, Organism=Escherichia coli, GI1786607, Length=354, Percent_Identity=55.0847457627119, Blast_Score=409, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17544680, Length=349, Percent_Identity=44.4126074498567, Blast_Score=311, Evalue=4e-85, Organism=Drosophila melanogaster, GI19920510, Length=352, Percent_Identity=46.3068181818182, Blast_Score=327, Evalue=6e-90, Organism=Drosophila melanogaster, GI21355311, Length=236, Percent_Identity=24.1525423728814, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42451; Mature: 42320
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLFTLLHRDASCGARLGSLNTLHGAIETPIFMPVGTNATVKAMTPDDLLAVNAQIIL CCCHHHHHHHCCCHHCHHCCCCHHHHHHHCCCEEEEECCCCEEEEECCCCHHEECEEEEE SNTYHLYLRPGHRLVEQLGGLHSFMNWHRPILTDSGGFQVFSLGELRKISEEGVRFQSHL ECCEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECHHHHHHHHHCCEEHHHC DGSYHFLTPELSIGIQEALGADIIMCFDECPPATAEYDYVSRSLEMTTRWARRCKQAHRR CCCEEEECCCHHCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EGQQLFGIIQGGMHYDLRARSLEQIFEIGFDGYALGGLSVGEEKEQMYGVMEACAPLMPQ CHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCC DHPRYIMGIGAPQDLVEAVWHGYDMFDCVMPTRNARNGMLFTSQGRINIKAKIFEEDSGP CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCEEEEEEEEECCCCC LDPECGCHVCRNYSRAYLRHLYRAGEILASNLNTYHNLYYFLDLMRQMREAIKNDNLAGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RREFYAKQQIHHKI HHHHHHHHHHHHCC >Mature Secondary Structure STSLFTLLHRDASCGARLGSLNTLHGAIETPIFMPVGTNATVKAMTPDDLLAVNAQIIL CCHHHHHHHCCCHHCHHCCCCHHHHHHHCCCEEEEECCCCEEEEECCCCHHEECEEEEE SNTYHLYLRPGHRLVEQLGGLHSFMNWHRPILTDSGGFQVFSLGELRKISEEGVRFQSHL ECCEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECHHHHHHHHHCCEEHHHC DGSYHFLTPELSIGIQEALGADIIMCFDECPPATAEYDYVSRSLEMTTRWARRCKQAHRR CCCEEEECCCHHCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EGQQLFGIIQGGMHYDLRARSLEQIFEIGFDGYALGGLSVGEEKEQMYGVMEACAPLMPQ CHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCC DHPRYIMGIGAPQDLVEAVWHGYDMFDCVMPTRNARNGMLFTSQGRINIKAKIFEEDSGP CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCEEEEEEEEECCCCC LDPECGCHVCRNYSRAYLRHLYRAGEILASNLNTYHNLYYFLDLMRQMREAIKNDNLAGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RREFYAKQQIHHKI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA