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The map label for this gene is yhcC [C]

Identifier: 118580197

GI number: 118580197

Start: 1905583

End: 1906641

Strand: Reverse

Name: yhcC [C]

Synonym: Ppro_1777

Alternate gene names: 118580197

Gene position: 1906641-1905583 (Counterclockwise)

Preceding gene: 118580198

Following gene: 118580196

Centisome position: 47.57

GC content: 62.98

Gene sequence:

>1059_bases
ATGAGCAGGATTACGGTCCCTTTTTTTATCAGCCACCAGGGGTGCCCGCACACCTGCGTTTTCTGCGATCAGCGCTCGAT
CTCCGGCTCCAGTGGCACACTGCCGGATGCGCAAGAAATTGCCGCAAGAATCGCTGACTGGCACGGTTCGGCACAGGGGC
GTCCCCTGGAGGTTGCCTTCTTCGGCGGAACCTTCACCGCTCTCCCCCGTCAGATTCAGCAACGGCTCCTGGCTGCGGTA
CACCCCTTCCTCCGCTCCGGCGTCGTCAGCTCGATCCGGGTCTCCACCCGTCCCGACGCGCTGGATGCCGAAAACGTACC
CTGGCTGGCTGGCCAGGGAGTCGCAATCATCGAACTGGGAGTGCAGAGCATGGACGATGCCGTGCTGGAGGCCGCCGGCC
GCGGCCATGACGCCCGGGCATCCCTGGATGCCATCCGCCGAATCAGGGAAAACGGTCTCATGGCTGGCGCCCAGCTCATA
CCCGGCCTGCCCGGTGACACCCCGGCAACCGCCTGCGCGTCACTGGAACGCGTGATCGATGCGGGCGTTGATTTCGTCAG
GATTTACCCCACGGTTGTGCTGCGCGGTACGGAATTGGCCCGGCGCTACGGGGAGGGAACCTATCACCCCCTGACCCTGC
AGGCGGGAGTGGCGCTCTGCAAGACACTGCTGAGAATCGCCATGAGACGGGGTGTCCCGGTCATACGCATGGGGCTGCAG
GACGACGAATCGCTCCGCGATGGCGCCATTCTGGCCGGCTGCTGGCACCCTGCCCTAGGCCATCTGGTGCAATGCGAGCT
CTACCACGACCTGCTGTTTCAGCTGATCTCCGCGCTTCCCGATCATTCACGGCCAGTGACGATCAGCTGCCATCCCACAC
GGCTTTCGGCTGTCATCGGCCAGAAGAGGAGTACCATAAATCGCCTTCAGCAGCAGGGAATCAGCATTCGGCGCGTCCTG
GCCGACCCGGTGCTGTCGCTTCCCGAGTGCCAGGTCAGCTCCTGCGGTTTTTCGTCAAGAGGTTCCCTGCTGCACGATCA
GATTAAAATCCATGACTGA

Upstream 100 bases:

>100_bases
CCGTTGTGGGCGAAGGAGAGGGGCGCTCCAAAAAGATCGCCCAGCAGGCGGCGGCGACGCAGGCACTGACGGCATTTTCA
GCCCCTGCCAATGCATCCCC

Downstream 100 bases:

>100_bases
ACTGCCCGAGTTGAAAGCGTATTGCGCTCCCTGCGGGATGCCAGGCCATCGCTGGTCGGGCGGATACAAACGTTCCTACA
CCTGTTTTTTATCGTTTTTC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSRITVPFFISHQGCPHTCVFCDQRSISGSSGTLPDAQEIAARIADWHGSAQGRPLEVAFFGGTFTALPRQIQQRLLAAV
HPFLRSGVVSSIRVSTRPDALDAENVPWLAGQGVAIIELGVQSMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLI
PGLPGDTPATACASLERVIDAGVDFVRIYPTVVLRGTELARRYGEGTYHPLTLQAGVALCKTLLRIAMRRGVPVIRMGLQ
DDESLRDGAILAGCWHPALGHLVQCELYHDLLFQLISALPDHSRPVTISCHPTRLSAVIGQKRSTINRLQQQGISIRRVL
ADPVLSLPECQVSSCGFSSRGSLLHDQIKIHD

Sequences:

>Translated_352_residues
MSRITVPFFISHQGCPHTCVFCDQRSISGSSGTLPDAQEIAARIADWHGSAQGRPLEVAFFGGTFTALPRQIQQRLLAAV
HPFLRSGVVSSIRVSTRPDALDAENVPWLAGQGVAIIELGVQSMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLI
PGLPGDTPATACASLERVIDAGVDFVRIYPTVVLRGTELARRYGEGTYHPLTLQAGVALCKTLLRIAMRRGVPVIRMGLQ
DDESLRDGAILAGCWHPALGHLVQCELYHDLLFQLISALPDHSRPVTISCHPTRLSAVIGQKRSTINRLQQQGISIRRVL
ADPVLSLPECQVSSCGFSSRGSLLHDQIKIHD
>Mature_351_residues
SRITVPFFISHQGCPHTCVFCDQRSISGSSGTLPDAQEIAARIADWHGSAQGRPLEVAFFGGTFTALPRQIQQRLLAAVH
PFLRSGVVSSIRVSTRPDALDAENVPWLAGQGVAIIELGVQSMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLIP
GLPGDTPATACASLERVIDAGVDFVRIYPTVVLRGTELARRYGEGTYHPLTLQAGVALCKTLLRIAMRRGVPVIRMGLQD
DESLRDGAILAGCWHPALGHLVQCELYHDLLFQLISALPDHSRPVTISCHPTRLSAVIGQKRSTINRLQQQGISIRRVLA
DPVLSLPECQVSSCGFSSRGSLLHDQIKIHD

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcC [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=197, Percent_Identity=26.3959390862944, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI2367204, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6325171, Length=256, Percent_Identity=23.828125, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38042; Mature: 37911

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRITVPFFISHQGCPHTCVFCDQRSISGSSGTLPDAQEIAARIADWHGSAQGRPLEVAF
CCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
FGGTFTALPRQIQQRLLAAVHPFLRSGVVSSIRVSTRPDALDAENVPWLAGQGVAIIELG
ECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCEECCCCEEEEEEC
VQSMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLIPGLPGDTPATACASLERVID
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECHHHCCCCCCCCHHHHHHHHHHHHH
AGVDFVRIYPTVVLRGTELARRYGEGTYHPLTLQAGVALCKTLLRIAMRRGVPVIRMGLQ
CCCCCEEEEHHHEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DDESLRDGAILAGCWHPALGHLVQCELYHDLLFQLISALPDHSRPVTISCHPTRLSAVIG
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHH
QKRSTINRLQQQGISIRRVLADPVLSLPECQVSSCGFSSRGSLLHDQIKIHD
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEECCEEECC
>Mature Secondary Structure 
SRITVPFFISHQGCPHTCVFCDQRSISGSSGTLPDAQEIAARIADWHGSAQGRPLEVAF
CCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
FGGTFTALPRQIQQRLLAAVHPFLRSGVVSSIRVSTRPDALDAENVPWLAGQGVAIIELG
ECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCEECCCCEEEEEEC
VQSMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLIPGLPGDTPATACASLERVID
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECHHHCCCCCCCCHHHHHHHHHHHHH
AGVDFVRIYPTVVLRGTELARRYGEGTYHPLTLQAGVALCKTLLRIAMRRGVPVIRMGLQ
CCCCCEEEEHHHEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DDESLRDGAILAGCWHPALGHLVQCELYHDLLFQLISALPDHSRPVTISCHPTRLSAVIG
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHH
QKRSTINRLQQQGISIRRVLADPVLSLPECQVSSCGFSSRGSLLHDQIKIHD
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]