| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ycjU [C]
Identifier: 118580169
GI number: 118580169
Start: 1880939
End: 1881622
Strand: Reverse
Name: ycjU [C]
Synonym: Ppro_1749
Alternate gene names: 118580169
Gene position: 1881622-1880939 (Counterclockwise)
Preceding gene: 118580170
Following gene: 118580157
Centisome position: 46.95
GC content: 60.96
Gene sequence:
>684_bases ATGAACAACATGCAGGCAAGGGCGGTTATTTTCGATTTTGACGGCGTTATCGTGGATACGGAACCGCTGCACTACCGGGC TTTTCAGCAGATCCTCGATCCGCGCGGTCTGGGCTTCAGCTGGCAGGAGTACGTGGAGACCTACATGGGCTTCGATGATC GCGACGCATTCATGGAGGCGTTCAGCTCCCGAGGCGTCTCTCTGGAGGGCGGGGAACTGCAGCGGCTCATCGCCAGGAAA GCCGACATATTCCAGGATGTCATCAAGGAAGGAATCAACGCCTACCCGGGCGTAGTCGAACTGATCAGGGACCTGCACAC CGCGAAGGCCCCCCTGGCCATATGCAGCGGCGCCCTCAGGTCAGATATCATGCCCATCCTGGAGCTGCTCGGCATCAGCG ACTGTTTCGATGTAATCGTGACCGCTGAGGATGTTGCCAGGAGCAAGCCGGACCCGGAGTGCTATCGGGTCTCCTTCGAC AGGCTGAGGGAGTGCCGGTCTGAGTCGGAGTTCTGCACGACCGACACCATTGCCATCGAGGATACGCCGGCAGGCATCAG CGCCGCCTCGTCGGCGGGCCTGCGGGTGATCGCGGTGACCAACAGCTATGCTGCCGGGCAATTGACCGCGGCGGACCGTA TCGTGGAGTCGCTGGAACAGTTGCGGGGAGTCCACACGCCGTAA
Upstream 100 bases:
>100_bases TCGTCACCGGCAGCCGCGCATTGGAAAACAGGTTCGCGGCCATCCCGCGACCTTCACATTACTGCGCCGGACTGGCGCTG GCGACAACATGGTGACTTTT
Downstream 100 bases:
>100_bases GAAGCAGCTCCCCTCTCATCTCCCGATACAGAAAGAGCCCTGAGGCCTTAAGCCCAGGGCTCTTTCTATGTGAAACATGG GTCTCTATCCGACGGTCGGC
Product: HAD family hydrolase
Products: beta-D-glucose 6-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNNMQARAVIFDFDGVIVDTEPLHYRAFQQILDPRGLGFSWQEYVETYMGFDDRDAFMEAFSSRGVSLEGGELQRLIARK ADIFQDVIKEGINAYPGVVELIRDLHTAKAPLAICSGALRSDIMPILELLGISDCFDVIVTAEDVARSKPDPECYRVSFD RLRECRSESEFCTTDTIAIEDTPAGISAASSAGLRVIAVTNSYAAGQLTAADRIVESLEQLRGVHTP
Sequences:
>Translated_227_residues MNNMQARAVIFDFDGVIVDTEPLHYRAFQQILDPRGLGFSWQEYVETYMGFDDRDAFMEAFSSRGVSLEGGELQRLIARK ADIFQDVIKEGINAYPGVVELIRDLHTAKAPLAICSGALRSDIMPILELLGISDCFDVIVTAEDVARSKPDPECYRVSFD RLRECRSESEFCTTDTIAIEDTPAGISAASSAGLRVIAVTNSYAAGQLTAADRIVESLEQLRGVHTP >Mature_227_residues MNNMQARAVIFDFDGVIVDTEPLHYRAFQQILDPRGLGFSWQEYVETYMGFDDRDAFMEAFSSRGVSLEGGELQRLIARK ADIFQDVIKEGINAYPGVVELIRDLHTAKAPLAICSGALRSDIMPILELLGISDCFDVIVTAEDVARSKPDPECYRVSFD RLRECRSESEFCTTDTIAIEDTPAGISAASSAGLRVIAVTNSYAAGQLTAADRIVESLEQLRGVHTP
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=231, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1787576, Length=225, Percent_Identity=30.2222222222222, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789046, Length=191, Percent_Identity=24.0837696335079, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789787, Length=243, Percent_Identity=25.5144032921811, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788021, Length=219, Percent_Identity=24.6575342465753, Blast_Score=60, Evalue=9e-11, Organism=Drosophila melanogaster, GI17137324, Length=232, Percent_Identity=28.0172413793103, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 5.4.2.6
Molecular weight: Translated: 25018; Mature: 25018
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNMQARAVIFDFDGVIVDTEPLHYRAFQQILDPRGLGFSWQEYVETYMGFDDRDAFMEA CCCCCEEEEEEECCCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHH FSSRGVSLEGGELQRLIARKADIFQDVIKEGINAYPGVVELIRDLHTAKAPLAICSGALR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDIMPILELLGISDCFDVIVTAEDVARSKPDPECYRVSFDRLRECRSESEFCTTDTIAIE HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEC DTPAGISAASSAGLRVIAVTNSYAAGQLTAADRIVESLEQLRGVHTP CCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNNMQARAVIFDFDGVIVDTEPLHYRAFQQILDPRGLGFSWQEYVETYMGFDDRDAFMEA CCCCCEEEEEEECCCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHH FSSRGVSLEGGELQRLIARKADIFQDVIKEGINAYPGVVELIRDLHTAKAPLAICSGALR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDIMPILELLGISDCFDVIVTAEDVARSKPDPECYRVSFDRLRECRSESEFCTTDTIAIE HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEC DTPAGISAASSAGLRVIAVTNSYAAGQLTAADRIVESLEQLRGVHTP CCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-D-glucose 1-phosphate
Specific reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate
General reaction: Group transfer (intramolecular phosphate group isomerization [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]