| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is livJ [C]
Identifier: 118580093
GI number: 118580093
Start: 1790477
End: 1791616
Strand: Direct
Name: livJ [C]
Synonym: Ppro_1671
Alternate gene names: 118580093
Gene position: 1790477-1791616 (Clockwise)
Preceding gene: 118580092
Following gene: 118580094
Centisome position: 44.67
GC content: 62.54
Gene sequence:
>1140_bases GTGAAAAAAGTTGCACTGCTCTGTAGCCTCATCTGCATCACACTGCTGACCGCTTCGGCGGCCTTTGCCGCTCCCTCCCT CAAGATCGGCGGCCTGTTTGCCGTGACCGGTCCGGCCGCCTTCCTGGGGGAACCGGAGCGTAACACCGCCATGATGGTGG TGTCCGAGATCAACCGGGCAGGGGGCATCCGGGGACAAAAGCTTGAGCTCGTTGTCTACGATACGGCCGGGGATGCCACC AAGGCGGTGCAGCTGGCCAACAAGCTGATCAAGAGCGACAGGGTCATGGCCATCATCGGGCCCAGCACTACCGGTGAGTC CATGGCGGTCATACCGGTGGCCGAGCGCGGCAGGGTGCCGTTGATCTCCTGCGCCGCCGGGATAAAGATCACCGAACCGC TGAAAAAGTGGGTCTTCAAGACGGCGCAGAACGACAGCCTGGCCGTTATCAGGATCTACGAACATCTCAAGAAACAGAGG CTGCAGCGGGTGGCGCTGCTCACCGTTTCCGACGGTTTCGGGGCATCGGGCCGCGAACAGCTCAAGGCCCAGGCAGCCCG CTATGGCATCAGGATCGTCGCCGACGACACCTACGGCCCCAAGGACACGGACATGACCTCCCAGTTGACCAAGATCCGCG GCCTCAAGCCGGATGCCATCATCTGCTGGGGCACCAACCCCGGCCCGGCGGTGATCACCAAAAACGCCCGCCAGCTGGGG ATAAAAACTCCGCTGTTCATGAGCCATGGCGTTTCCTCCAAGAAGTACATCCAACTGGCCGGAAAGGCTGCCGAAGGGGT CAAGCTCCCCTCGGGCAGGGTGATCGTGGCTGACCAGCTTCCCGCCTCTGATCCCCAGAAACGCTCGCTGATAGCTTTCG TCAAGGGGTATGAGAGATACTACAAGGCCGAGGGTGACCACTTCGGCGGCCATGCCTGGGATGCGGTCATGCTGCTCAAG GGCGCCTTCGAGCGCGGCGCAACAACCCCGGCGGCGGTCCGCGACCAGCTGGAAAATACGCGCCAGTTCCACGGCATCGG CGGCAGCTTCACCTTTACCTCCCGGGATCATGCCGGCCTGGGCAAGGATGCCTTCGTGCTGGTGGAGGTCAGGAAGGGCG ACTGGGCGATCGTGAAGTAG
Upstream 100 bases:
>100_bases TTTTTCCGTGTTTTTATGCTCTTTATTGGGACTGGAACCATACGTCATTACATGGAAATTGCGGTCTAATTGTTCGATAT TACGAGATTGTGGAGGGACT
Downstream 100 bases:
>100_bases GAAACGTCCGGACGGATTCTACGTAAACTATCCTCCCTCCCCATGCAGGGGAGGGAGTTTCTTTGTGAGAAACGGAACAT CAATGCAGTTTGACCAGATC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKKVALLCSLICITLLTASAAFAAPSLKIGGLFAVTGPAAFLGEPERNTAMMVVSEINRAGGIRGQKLELVVYDTAGDAT KAVQLANKLIKSDRVMAIIGPSTTGESMAVIPVAERGRVPLISCAAGIKITEPLKKWVFKTAQNDSLAVIRIYEHLKKQR LQRVALLTVSDGFGASGREQLKAQAARYGIRIVADDTYGPKDTDMTSQLTKIRGLKPDAIICWGTNPGPAVITKNARQLG IKTPLFMSHGVSSKKYIQLAGKAAEGVKLPSGRVIVADQLPASDPQKRSLIAFVKGYERYYKAEGDHFGGHAWDAVMLLK GAFERGATTPAAVRDQLENTRQFHGIGGSFTFTSRDHAGLGKDAFVLVEVRKGDWAIVK
Sequences:
>Translated_379_residues MKKVALLCSLICITLLTASAAFAAPSLKIGGLFAVTGPAAFLGEPERNTAMMVVSEINRAGGIRGQKLELVVYDTAGDAT KAVQLANKLIKSDRVMAIIGPSTTGESMAVIPVAERGRVPLISCAAGIKITEPLKKWVFKTAQNDSLAVIRIYEHLKKQR LQRVALLTVSDGFGASGREQLKAQAARYGIRIVADDTYGPKDTDMTSQLTKIRGLKPDAIICWGTNPGPAVITKNARQLG IKTPLFMSHGVSSKKYIQLAGKAAEGVKLPSGRVIVADQLPASDPQKRSLIAFVKGYERYYKAEGDHFGGHAWDAVMLLK GAFERGATTPAAVRDQLENTRQFHGIGGSFTFTSRDHAGLGKDAFVLVEVRKGDWAIVK >Mature_379_residues MKKVALLCSLICITLLTASAAFAAPSLKIGGLFAVTGPAAFLGEPERNTAMMVVSEINRAGGIRGQKLELVVYDTAGDAT KAVQLANKLIKSDRVMAIIGPSTTGESMAVIPVAERGRVPLISCAAGIKITEPLKKWVFKTAQNDSLAVIRIYEHLKKQR LQRVALLTVSDGFGASGREQLKAQAARYGIRIVADDTYGPKDTDMTSQLTKIRGLKPDAIICWGTNPGPAVITKNARQLG IKTPLFMSHGVSSKKYIQLAGKAAEGVKLPSGRVIVADQLPASDPQKRSLIAFVKGYERYYKAEGDHFGGHAWDAVMLLK GAFERGATTPAAVRDQLENTRQFHGIGGSFTFTSRDHAGLGKDAFVLVEVRKGDWAIVK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=287, Percent_Identity=26.8292682926829, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789867, Length=333, Percent_Identity=26.7267267267267, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40674; Mature: 40674
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVALLCSLICITLLTASAAFAAPSLKIGGLFAVTGPAAFLGEPERNTAMMVVSEINRA CCHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCHHHCCCCCCCCEEEEEEHHHHH GGIRGQKLELVVYDTAGDATKAVQLANKLIKSDRVMAIIGPSTTGESMAVIPVAERGRVP CCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCC LISCAAGIKITEPLKKWVFKTAQNDSLAVIRIYEHLKKQRLQRVALLTVSDGFGASGREQ EEEECCCCEEHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHEEEEEEEECCCCCCCHHH LKAQAARYGIRIVADDTYGPKDTDMTSQLTKIRGLKPDAIICWGTNPGPAVITKNARQLG HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCHHCC IKTPLFMSHGVSSKKYIQLAGKAAEGVKLPSGRVIVADQLPASDPQKRSLIAFVKGYERY CCCCHHHHCCCCCCEEEEEECCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH YKAEGDHFGGHAWDAVMLLKGAFERGATTPAAVRDQLENTRQFHGIGGSFTFTSRDHAGL HHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC GKDAFVLVEVRKGDWAIVK CCCEEEEEEEECCCEEEEC >Mature Secondary Structure MKKVALLCSLICITLLTASAAFAAPSLKIGGLFAVTGPAAFLGEPERNTAMMVVSEINRA CCHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCHHHCCCCCCCCEEEEEEHHHHH GGIRGQKLELVVYDTAGDATKAVQLANKLIKSDRVMAIIGPSTTGESMAVIPVAERGRVP CCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCC LISCAAGIKITEPLKKWVFKTAQNDSLAVIRIYEHLKKQRLQRVALLTVSDGFGASGREQ EEEECCCCEEHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHEEEEEEEECCCCCCCHHH LKAQAARYGIRIVADDTYGPKDTDMTSQLTKIRGLKPDAIICWGTNPGPAVITKNARQLG HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCHHCC IKTPLFMSHGVSSKKYIQLAGKAAEGVKLPSGRVIVADQLPASDPQKRSLIAFVKGYERY CCCCHHHHCCCCCCEEEEEECCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH YKAEGDHFGGHAWDAVMLLKGAFERGATTPAAVRDQLENTRQFHGIGGSFTFTSRDHAGL HHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC GKDAFVLVEVRKGDWAIVK CCCEEEEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]