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The map label for this gene is ppdD [C]

Identifier: 118580078

GI number: 118580078

Start: 1775631

End: 1775855

Strand: Direct

Name: ppdD [C]

Synonym: Ppro_1656

Alternate gene names: 118580078

Gene position: 1775631-1775855 (Clockwise)

Preceding gene: 118580077

Following gene: 118580079

Centisome position: 44.3

GC content: 53.78

Gene sequence:

>225_bases
ATGCTAAACAAATTGAGGAACAGAAAAGGCTTTACCCTGATCGAGCTGTTGATCGTCGTGGCGATCATCGGCATCCTGGC
GGCCATCGCCATCCCGCAGTTCTCCGCCTACCGGGCAAAGGCCTACAACTCGGCCGCCAACTCTGACCTGAAAAACATCA
AGACCGGGATGGAAGCCTTCATGGCTGACAACCAGCAGTATCCTGGCGACGTTGACTACAGATAA

Upstream 100 bases:

>100_bases
GTTATAACTTTGCTTGACTCTGGCCTGTGTTTTGCTACTGTTTGATCTGTTTACAATGTGACCGCTCATCGTCTGGGCAA
CAAAACGAAAGGAGAAAGAT

Downstream 100 bases:

>100_bases
ATCAAACAAAGGAGATAATATATGAAAAAACATATTATTTTTGCATCAATGTCTCTGCTTGTAGCAAGCAGCGCTTTTGC
TGGTACCAGCATAACAATGA

Product: pilin domain-containing protein

Products: NA

Alternate protein names: Pilin Domain Protein; Geopilin

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MLNKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRAKAYNSAANSDLKNIKTGMEAFMADNQQYPGDVDYR

Sequences:

>Translated_74_residues
MLNKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRAKAYNSAANSDLKNIKTGMEAFMADNQQYPGDVDYR
>Mature_74_residues
MLNKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRAKAYNSAANSDLKNIKTGMEAFMADNQQYPGDVDYR

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8222; Mature: 8222

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRAKAYNSAANSDLKNIKTGMEAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MADNQQYPGDVDYR
HHCCCCCCCCCCCC
>Mature Secondary Structure
MLNKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRAKAYNSAANSDLKNIKTGMEAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MADNQQYPGDVDYR
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA