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The map label for this gene is lptF [H]

Identifier: 118580061

GI number: 118580061

Start: 1754568

End: 1755716

Strand: Direct

Name: lptF [H]

Synonym: Ppro_1638

Alternate gene names: 118580061

Gene position: 1754568-1755716 (Clockwise)

Preceding gene: 118580060

Following gene: 118580062

Centisome position: 43.78

GC content: 62.66

Gene sequence:

>1149_bases
ATGAAACGCACCCTCTACCTCTCCATCATCCGTGAGATCACCAGCCTGTTCCTTTTGGGGCTGGGCATCTTCACGCTGGT
ACTGCTGATGGGACGCATGATCAAGCTGACCGAGATGGTCATCTCCCGCGGCGTTGCACTGGCTGACATGGGCCGGATGA
TCATCTGCCTGATGCCGTCCTTTCTGGTCTACACCATCCCCATGGCATTCCTGCTGGCGGTGCTGCTCACCTTCGGCCGC
CTCTCCGCGGACAGCGAGATAACGGTCATGAAGGCCTGCGGCATCAGCCTTGTGCAGATCATGCCGCCGGTTCTGCTCTG
CGCCCTGGTGGCAGCCACGCTGGGCCTGTATGCCGGGGTGGTGGGGGTGCCGTGGGGAAATCGCGCCTTTGCCGCCATGA
GCTTCGACATGCTCAGCCAGAACGTCTCCTCCACCATCAGGGAGAAGGTTTTCTGGGACGACATCCCCGGCATCGTGCTC
TATACCGATCATTACGATGAAGAGCGCCACACCCTTTCCGGTGTGGTCATCAACGATGAGCGCAACGCTTCCCGTCCCCT
GACCATCTTCGCCTCCAGCGGCCTGGTGGCGGGGGGCGCAAATCCCCGTGATGTCCGGCTGATTCTGAGGAGCGGCAGTA
TTCACGCCCAGGGGAGGGGGGGGGAGTACCGGCTGATTCATTTCGCCGAGTATGTCATGAACATCGCTGCTCCTGGCGGC
ACGGACACCGTTACCCGCGCCCCGCGGGAGATGACCGTGACGGAACTGCACCGCTCCATCGCCAGTCCCTCCACGCAGCC
GAAACTGCGCAAGAAGATGGCGACGGAGATGCACAGCCGCTTCGCGCTCCCCTTCGCCTCGCTGGTCTTTGCCGTGCTGG
CCGTGCCGCTGGGACTGCAGAACCGCCGCTCGGCCAGGTCCTTCGGCTTTGCCATCAGCATCGGGGTCCTGCTGGCCTAC
TACATCCTGCTGTCCCTGTTGGGCACCATGGCGGAAAAGGGCAGTTTCCCCGCACCACTGGCACTCTGGATTCCCAACAT
GGTCTTTCTGGTGCTGGGCTGGGTGCTGCTCAGGCTGGCCTCCCAGGAGCGGAGTCTCACGCTTCCTTCCGTGGAAAAGC
TGCGCGGTCTGCTGCGCAGGAGTCCCTGA

Upstream 100 bases:

>100_bases
CGAACCTTGAAACGTGCGCTTTGCTCCGCTGCGTCTGTCGCTTCGTGGGGCATGCCTGTTTCCTTTACACCCCATTGCCA
CTCATGTATCATTGCCCCCC

Downstream 100 bases:

>100_bases
TATGACGATCATCGACCGGTATATTGCCATGACCTGGCTGCGGCTGCTGCTGCTCTGCCAGGGGAGTTTCCTCTCCATCT
ATCTGGTGCTGGACATGATG

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPSFLVYTIPMAFLLAVLLTFGR
LSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGVVGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVL
YTDHYDEERHTLSGVVINDERNASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRGGEYRLIHFAEYVMNIAAPGG
TDTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLGLQNRRSARSFGFAISIGVLLAY
YILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLLRLASQERSLTLPSVEKLRGLLRRSP

Sequences:

>Translated_382_residues
MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPSFLVYTIPMAFLLAVLLTFGR
LSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGVVGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVL
YTDHYDEERHTLSGVVINDERNASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRGGEYRLIHFAEYVMNIAAPGG
TDTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLGLQNRRSARSFGFAISIGVLLAY
YILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLLRLASQERSLTLPSVEKLRGLLRRSP
>Mature_382_residues
MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPSFLVYTIPMAFLLAVLLTFGR
LSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGVVGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVL
YTDHYDEERHTLSGVVINDERNASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRGGEYRLIHFAEYVMNIAAPGG
TDTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLGLQNRRSARSFGFAISIGVLLAY
YILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLLRLASQERSLTLPSVEKLRGLLRRSP

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=286, Percent_Identity=22.3776223776224, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41856; Mature: 41856

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FLVYTIPMAFLLAVLLTFGRLSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGV
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVLYTDHYDEERHTLSGVVINDE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCEEEECC
RNASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRGGEYRLIHFAEYVMNIAAPGG
CCCCCCEEEEECCCEEECCCCCHHEEEEEECCCEEECCCCCCEEHHHHHHHHHHHCCCCC
TDTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLGLQ
CCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
NRRSARSFGFAISIGVLLAYYILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLLRLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SQERSLTLPSVEKLRGLLRRSP
HCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FLVYTIPMAFLLAVLLTFGRLSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGV
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVLYTDHYDEERHTLSGVVINDE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCEEEECC
RNASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRGGEYRLIHFAEYVMNIAAPGG
CCCCCCEEEEECCCEEECCCCCHHEEEEEECCCEEECCCCCCEEHHHHHHHHHHHCCCCC
TDTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLGLQ
CCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
NRRSARSFGFAISIGVLLAYYILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLLRLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SQERSLTLPSVEKLRGLLRRSP
HCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]