| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is phoB [H]
Identifier: 118580029
GI number: 118580029
Start: 1719896
End: 1720261
Strand: Direct
Name: phoB [H]
Synonym: Ppro_1606
Alternate gene names: 118580029
Gene position: 1719896-1720261 (Clockwise)
Preceding gene: 118580028
Following gene: 118580030
Centisome position: 42.91
GC content: 56.01
Gene sequence:
>366_bases ATGGCAAAAGTAATCATGACTGCCGATGATTCGGCCAGTGTTCGCCAGATGGTGGCGTTTACCCTCAAGCAGAACGGCTA TACCGTCGTGGAAGCGGTGGATGGACGTGATGCCCTGAACAAGTTGAATGCGCAGAAGGTCGATATGCTGCTGACCGACC TGAATATGCCAAATCTGGATGGCATCGGCCTGATCAAGGGAGTGCGGGCCGGTTCCCTGAACAAGTTCATCCCGATCGTC ATGCTGACTACCGAATCCCAGGACTCGAGGAAAGCCGAGGGCAAGGCGGCCGGCGCCACCGGGTGGATTGTCAAGCCGTT CAAACCCGAGCAGCTGATTGCCGTTATCAAGAAGGTACTGGGGTAG
Upstream 100 bases:
>100_bases GGGCTCTGGTCGAGGTGATCCAGGCCTGTGGCGCCGAGCGCCACGCAGTCTGTACACAGAATAACAATTCTACCTGTAGG TGGTTTGGAGGTGTGGAGTA
Downstream 100 bases:
>100_bases GGCTGGAAAATCTGGTGAGGAGTGAAGGGCAAAGAGTGAGGCCATACCCCTTTATTCCCCACCAGTTTTTTCTTCACCTC TTACCCACACACCGAGGTGT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAKVIMTADDSASVRQMVAFTLKQNGYTVVEAVDGRDALNKLNAQKVDMLLTDLNMPNLDGIGLIKGVRAGSLNKFIPIV MLTTESQDSRKAEGKAAGATGWIVKPFKPEQLIAVIKKVLG
Sequences:
>Translated_121_residues MAKVIMTADDSASVRQMVAFTLKQNGYTVVEAVDGRDALNKLNAQKVDMLLTDLNMPNLDGIGLIKGVRAGSLNKFIPIV MLTTESQDSRKAEGKAAGATGWIVKPFKPEQLIAVIKKVLG >Mature_120_residues AKVIMTADDSASVRQMVAFTLKQNGYTVVEAVDGRDALNKLNAQKVDMLLTDLNMPNLDGIGLIKGVRAGSLNKFIPIVM LTTESQDSRKAEGKAAGATGWIVKPFKPEQLIAVIKKVLG
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=40.8333333333333, Blast_Score=102, Evalue=6e-24, Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=37.6068376068376, Blast_Score=84, Evalue=3e-18, Organism=Escherichia coli, GI1788713, Length=103, Percent_Identity=37.8640776699029, Blast_Score=70, Evalue=3e-14, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=32.4786324786325, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1787375, Length=116, Percent_Identity=28.448275862069, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1790299, Length=117, Percent_Identity=24.7863247863248, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI145693157, Length=117, Percent_Identity=32.4786324786325, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=27.5862068965517, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=28.448275862069, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13000; Mature: 12869
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVIMTADDSASVRQMVAFTLKQNGYTVVEAVDGRDALNKLNAQKVDMLLTDLNMPNLD CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCHHHHHHHHCCCCCCCCC GIGLIKGVRAGSLNKFIPIVMLTTESQDSRKAEGKAAGATGWIVKPFKPEQLIAVIKKVL CCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH G C >Mature Secondary Structure AKVIMTADDSASVRQMVAFTLKQNGYTVVEAVDGRDALNKLNAQKVDMLLTDLNMPNLD CEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCHHHHHHHHCCCCCCCCC GIGLIKGVRAGSLNKFIPIVMLTTESQDSRKAEGKAAGATGWIVKPFKPEQLIAVIKKVL CCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]